| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,705,971 | C→A | 25.8% | intergenic (‑181/+127) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,705,971 | 0 | C | A | 25.8% | 483.0 / 160.5 | 207 | intergenic (‑181/+127) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base C (65/87); new base A (48/5); total (113/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.90e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.34e-01 | |||||||||||
Only 100 of 219 total aligned reads displayed.
GGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCT > NC_000913/3705873‑3706070 | gggAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcg > 2:2951933/1‑100 (MQ=255)gggAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcg > 2:2676500/1‑100 (MQ=255)gggAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCAAAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcg > 2:3563220/1‑100 (MQ=255) ggAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcgg > 2:655458/1‑100 (MQ=255) ggAATGAAGTATAGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcgg > 2:2461609/1‑100 (MQ=255) gAATGTAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACTGCGCCGCCGGGTTTACAGATTGTTGACAAATTGCGCTTTGTTGATTCCGGATgcg > 1:2226813/1‑98 (MQ=38) gAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcggc > 2:2154484/1‑100 (MQ=255) aaTGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcggcg < 2:3091417/100‑1 (MQ=255) tGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGtt > 2:427861/1‑100 (MQ=255) tGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGtt < 2:2383351/100‑1 (MQ=255) aGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcggcataaac < 2:3417892/100‑7 (MQ=255) gTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACg < 1:280471/100‑1 (MQ=255) gTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACg < 1:1562972/100‑1 (MQ=255) tATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTAACAAAGTGCGATTTGTTTATGCCGGATGCGGCGTTAACGc > 1:836643/1‑100 (MQ=255) aTTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGcc < 1:3643778/100‑1 (MQ=255) aTTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGcc < 1:2523573/100‑1 (MQ=255) ttGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCt < 2:2869453/100‑1 (MQ=255) ttGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCt < 2:3154222/100‑1 (MQ=255) ttGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCt < 1:982211/100‑1 (MQ=255) tgctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCtt > 1:1022670/1‑100 (MQ=255) gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCGCCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa < 1:1093105/100‑1 (MQ=255) tgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATc > 1:3016339/1‑100 (MQ=255) gcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATcc > 2:2066277/1‑100 (MQ=255) ggATGGCGCTACACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTCTACGCCGGATGCGGCGTTAACGCCTTATCCGGc < 1:2461596/100‑1 (MQ=255) gATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGca < 1:727678/100‑2 (MQ=37) aTGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCt < 2:382467/100‑1 (MQ=255) aTGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCt < 1:775701/100‑1 (MQ=255) aTGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGcat < 1:3000303/100‑3 (MQ=25) gcgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGcat < 2:1302352/97‑3 (MQ=25) cgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGGCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑aa < 2:1804473/100‑1 (MQ=255) gCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGTGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATc > 2:1201301/1‑100 (MQ=255) cACGCAGAGGCACAGCGCCACCGGGTATACATATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCg < 2:505950/100‑1 (MQ=255) cACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGACCGCTGCGACTTTAACGCCTTCTCCGCCAT‑AC‑AAAAACg > 1:121753/1‑100 (MQ=21) cGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGt < 1:2344518/99‑1 (MQ=255) cGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTg < 2:1893263/100‑1 (MQ=255) cGCAGAGGCACAGCACCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATACCGGATGCGGCGTTAACGCCTTATCCGACCT‑AC‑AAAATCGTg > 1:1348269/1‑100 (MQ=255) gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGc < 1:2943993/100‑1 (MQ=255) cAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGTCCT‑AC‑AAAATCGTGCa > 1:3459258/1‑100 (MQ=255) cAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCa < 2:2011895/100‑1 (MQ=255) acaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCaa > 2:3575216/1‑100 (MQ=255) caGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAAt < 1:2910280/100‑1 (MQ=255) gcgcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATAc < 1:1746054/100‑1 (MQ=255) gcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACAt < 2:2264695/100‑1 (MQ=255) gcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACAt > 1:1187350/1‑100 (MQ=255) ccACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACAtt > 1:112978/1‑100 (MQ=255) cACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCAGGATGTGGCGTTAACTCTTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACAtt < 1:883397/99‑1 (MQ=18) cgatcttataCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGc < 2:1431508/94‑1 (MQ=255) gggTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGa > 1:3203892/1‑100 (MQ=255) tataCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑Att > 1:1888014/1‑100 (MQ=255) ataCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑Att‑‑‑t < 1:3570604/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑g < 1:2832051/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑g < 2:1187356/100‑1 (MQ=255) aGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑Gt > 2:3621596/1‑100 (MQ=255) gATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTa > 2:414958/1‑100 (MQ=255) gATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTa < 1:3621568/100‑1 (MQ=255) gcataaaCAAAGCGCACTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAgg > 1:2204182/7‑100 (MQ=18) tgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTg > 2:282792/1‑100 (MQ=255) gACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGa > 1:2021679/1‑100 (MQ=255) aCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGAt < 1:2096882/100‑1 (MQ=255) aCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGAt < 1:272825/100‑1 (MQ=255) aaGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAg > 2:3732283/1‑100 (MQ=255) aGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGc > 2:2984976/1‑100 (MQ=255) aGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGc < 1:1249325/100‑1 (MQ=255) aGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGc < 1:1661067/100‑1 (MQ=255) tGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGCgg > 2:2369793/1‑100 (MQ=255) gcgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGCCCTGATAAGCGGa < 2:2538387/100‑1 (MQ=255) cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑CC‑ACAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAg < 1:308987/100‑1 (MQ=255) cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAg > 2:3616599/1‑100 (MQ=255) cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAg < 2:2601910/100‑1 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAgc < 1:1773930/100‑1 (MQ=255) ttccgatctggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑AC‑AAGATCGTGCAAATTCAATATATTGCATG‑AGC‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAgcg < 1:2576287/90‑1 (MQ=17) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAgcg > 1:372536/1‑100 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAgcg > 1:1975033/1‑100 (MQ=255) tttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAgcgc > 1:2856861/1‑100 (MQ=255) ttGTGTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAAGAGTGCTAATTAAATACATTGCTGT‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGCgg < 1:440247/94‑1 (MQ=17) ttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCAT‑ACAAAAATCTTGCCAATTCAATATATTGCAGG‑ACC‑‑‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATc > 2:251765/7‑100 (MQ=18) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATc > 2:1916605/1‑100 (MQ=255) tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCa < 1:1201295/100‑1 (MQ=255) tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCa < 2:3181627/100‑1 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAg < 1:1171033/100‑1 (MQ=255) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCATGAC‑AAAAACCTGCAAATTCAATATATTGCAGG‑ATA‑‑‑CGT‑‑GTAGGCCTGATAAGCGTAGCGCATCa > 2:1528971/5‑100 (MQ=17) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCAT‑AC‑AAAAACCTGCAAATTCAATATATTGCAGG‑ATA‑‑‑CGT‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 1:494504/5‑100 (MQ=18) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑AC‑AAAAACCTGCAAATTCAATATATTGCAGG‑ATA‑‑‑CGT‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 2:1036689/4‑100 (MQ=18) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑AC‑AAAATCGTGCTAATTCAATATATTGCATA‑AAC‑‑‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:3550985/3‑100 (MQ=17) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑AC‑AAAAGCGTGCAAATTCAATACATTGCATG‑GGC‑‑‑CAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:2568609/3‑100 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑AC‑AAAGTCGTATAAATTCAATGTATTGCAGT‑TTA‑‑‑TTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGc > 2:761071/3‑100 (MQ=21) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑AC‑AAAACTTTGCAAATTCAATATATTGC‑‑A‑ATC‑‑‑TCCGTGTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:3500583/3‑100 (MQ=18) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑AC‑AAAAGCATGCAAATTCAATATATTGCAGA‑GTT‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:3335966/2‑100 (MQ=17) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑AC‑AAAAATGTGCAAATTCAATAAATTGC‑‑A‑ATTCAACTT‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGc > 2:1584065/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACTCCGCATCCGGCCT‑AC‑AAAAGCACGCAAATTCAATATATTGCAGA‑GAT‑‑‑TGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 2:2966949/2‑98 (MQ=14) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑AC‑AAAAACATGCAAATTCAATAGATTGCAGAGATT‑‑‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1510802/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑AC‑AAAAACATGCAAATTCAATAGATTGCAGA‑GAT‑‑‑TAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:2698/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑AC‑‑AAATCATGCAAATCCAAAATATTGCAGG‑AGT‑‑‑TAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAt > 2:1687542/2‑100 (MQ=21) gCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt < 2:3267846/100‑1 (MQ=255) gCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 2:17402/1‑100 (MQ=255) gCCGGATAAGGCGTTCACTCCGCATCCGGCCT‑AC‑AAAAGCACGCAAATTCAATATATTGCAGA‑GAT‑‑‑TGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 2:2427896/1‑99 (MQ=14) gCCGGATAAGGCGTTCACTCCGCATCCGGCCT‑AC‑AAAAGCACGCAAATTCAATATATTGCAGA‑AAT‑‑‑TGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGACaa > 2:177405/1‑99 (MQ=11) gCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑AC‑AAAATCGCTTAAATTCAATATATTGCACC‑ATC‑‑‑CTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 2:1096657/1‑99 (MQ=21) ccGGATAAGGCGTTTACGCCGCATCTGGCCT‑AC‑AAATTCTTCCAAATTCAATATATTGCAGA‑AAT‑‑‑CAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaat > 1:1059579/1‑98 (MQ=17) ggATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtttt < 1:1389415/100‑1 (MQ=255) | GGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCT > NC_000913/3705873‑3706070 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |