| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,115,627 | C→T | 100% | intergenic (‑137/+35) | mdtG ← / ← lpxL | putative drug efflux system protein/lauryl‑acyl carrier protein (ACP)‑dependent acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,115,627 | 0 | C | T | 97.5% | 396.3 / ‑0.7 | 117 | intergenic (‑137/+35) | mdtG/lpxL | putative drug efflux system protein/lauryl‑acyl carrier protein (ACP)‑dependent acyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (2/1); new base T (50/64); total (52/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 118 total aligned reads displayed.
AGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATAC > NC_000913/1115529‑1115722 | agaagaAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGcc < 2:2753734/100‑1 (MQ=255) tagaaAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCgg < 1:488366/99‑1 (MQ=255) agaaAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGa < 1:393313/100‑1 (MQ=255) agaaAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGa > 2:488368/1‑100 (MQ=255) aaaaGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGAt < 2:3469525/99‑1 (MQ=255) aaaaGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATg > 2:2261622/1‑100 (MQ=255) aaaGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGTGATTTGCTTGGGTAATGTCGGATGc > 2:1104761/1‑100 (MQ=255) aaaGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGc < 1:2562508/100‑1 (MQ=255) aaaGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGc > 2:1585595/1‑100 (MQ=255) aaGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGcc > 2:2965895/1‑100 (MQ=255) aGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAACTCAGGGGGATTTGCTGTGGTAATGTCGGATGCCa < 1:2198326/100‑1 (MQ=255) aGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCa < 2:265279/100‑1 (MQ=255) tAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTc < 2:2524360/100‑1 (MQ=255) tAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTc < 2:2796112/100‑1 (MQ=255) aaGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTc > 1:2707358/1‑99 (MQ=255) aGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTg > 1:190091/1‑100 (MQ=255) aGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTg < 2:2296017/100‑1 (MQ=255) gCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGa < 2:3017279/100‑1 (MQ=255) gCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGa > 1:2205961/1‑100 (MQ=255) cacaCTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGaa < 2:2814120/100‑1 (MQ=255) cacaCTAATTATGCGCCCGACTGCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGaa < 2:2452261/100‑1 (MQ=255) ttccgatctATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAg < 2:2558471/92‑1 (MQ=255) acacTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAg > 1:502318/1‑100 (MQ=255) acacTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAg < 1:2509893/100‑1 (MQ=255) acacTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAg < 2:601883/100‑1 (MQ=255) acacTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAg < 2:675263/100‑1 (MQ=255) acacTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAg < 1:3709389/100‑1 (MQ=255) acacTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAg < 1:3020600/100‑1 (MQ=255) cacTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGc > 2:2360155/1‑100 (MQ=255) aaTTATGCGCCCGGCTTCCAGGGGGCGCAATACAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATcc > 2:2520756/1‑100 (MQ=255) aTGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAgagatcggaa > 1:2558457/1‑91 (MQ=255) aTGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCa < 2:825262/100‑1 (MQ=255) tacgcCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCAt < 1:2262429/98‑1 (MQ=255) gcgcCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATg < 1:1104755/100‑1 (MQ=255) cgcCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATgg < 1:2965875/100‑1 (MQ=255) cgcCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATgg > 2:669516/1‑100 (MQ=255) cgcCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATgg > 1:2939857/1‑100 (MQ=255) gcCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATggg > 1:1248152/1‑100 (MQ=255) gcCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATggg < 1:1659961/100‑1 (MQ=255) cccGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGga < 2:1998694/100‑1 (MQ=255) cccGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGga > 2:667607/1‑100 (MQ=255) cccGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGga > 1:2677582/1‑100 (MQ=255) ccGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGgag < 1:2341345/100‑1 (MQ=255) cGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGgaga > 2:1608578/1‑100 (MQ=255) aCTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGAtt < 1:117923/100‑1 (MQ=255) cTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGAttt > 2:777613/1‑100 (MQ=255) ttCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAAGCATCCGGCATGGGGGATTTa < 1:3456957/100‑1 (MQ=255) ccAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAAt > 2:2101300/1‑100 (MQ=255) ccAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAAt < 1:2608117/100‑1 (MQ=255) cAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATa > 1:576676/1‑100 (MQ=255) cAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATa < 1:669513/100‑1 (MQ=255) aGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAg < 1:396532/100‑1 (MQ=255) aGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAg < 2:1704725/100‑1 (MQ=255) ggggCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCg < 1:325818/100‑1 (MQ=255) ggggCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCg < 1:1698053/100‑1 (MQ=255) gggCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGt < 2:1535239/100‑1 (MQ=255) gggCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGt > 1:1901112/1‑100 (MQ=255) ggCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTg > 2:1072872/1‑100 (MQ=255) gcgcAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGa > 1:1324085/1‑100 (MQ=255) gcgcAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGa > 2:13126/1‑100 (MQ=255) aaTCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGa < 1:3059800/100‑1 (MQ=255) aTCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGaa > 2:229382/1‑100 (MQ=255) ccAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGTTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACg < 1:579357/100‑1 (MQ=255) ccAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACg < 2:3598586/100‑1 (MQ=255) cAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGc > 2:579040/1‑100 (MQ=255) cAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGc > 2:2909799/1‑100 (MQ=255) agagagCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGcc > 2:2053413/1‑100 (MQ=255) agagagCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGcc > 2:1599037/1‑100 (MQ=255) gagCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTc > 2:1570765/1‑100 (MQ=255) gCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACgagatcgg > 1:2684048/1‑93 (MQ=255) gCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCg > 1:2428233/1‑100 (MQ=255) cTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCgg < 2:911025/100‑1 (MQ=255) cTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCgg > 2:1175397/1‑100 (MQ=255) ttttATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCggg < 1:3624059/100‑1 (MQ=255) tttATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGc < 2:3191871/100‑1 (MQ=255) ttATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCg < 1:3340133/100‑1 (MQ=255) aTCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCgtg < 2:383275/100‑1 (MQ=255) aTCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCgtg < 2:3156850/100‑1 (MQ=255) aTCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCg > 1:1022132/1‑98 (MQ=255) cGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGtt < 2:2290852/100‑1 (MQ=255) gCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGttt < 1:2909780/100‑1 (MQ=255) gCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGttt < 2:1816099/100‑1 (MQ=255) gCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGttt > 2:3070610/1‑100 (MQ=255) gCTAAATCAGGGGGATTTGCTGTGGGAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGttt < 1:907815/100‑1 (MQ=255) tAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGCTTTa > 1:3143891/1‑100 (MQ=255) aaaTCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTaa < 2:1122646/100‑1 (MQ=255) aaTCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTaaa < 1:901054/100‑1 (MQ=255) aTCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAg > 1:1591531/1‑100 (MQ=255) aGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATACGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGa > 2:2110648/1‑100 (MQ=255) ggATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGgt > 2:3447659/1‑100 (MQ=255) gATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGgtg > 1:302042/1‑100 (MQ=255) tttGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTa < 1:2321769/100‑1 (MQ=255) tGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAAc < 1:3447635/100‑1 (MQ=255) cTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACca < 1:2101289/100‑1 (MQ=255) tgtgGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACcac < 1:229380/100‑1 (MQ=255) gtgGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACcaca > 2:219256/1‑100 (MQ=255) gaggTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACcaca < 1:2261611/98‑1 (MQ=255) tgGTAATGCCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACat > 1:1930155/1‑100 (MQ=255) ggTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACata < 1:1153014/100‑1 (MQ=255) aaTGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATAc < 1:94031/100‑1 (MQ=255) | AGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATAC > NC_000913/1115529‑1115722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |