New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1104922 =185 (1.310)9 (0.070) 9/180 15.2 5.2% intergenic (+20/‑39) csgA/csgC curlin subunit, amyloid curli fibers, cryptic/curli assembly protein
?NC_000913 1104944 = 163 (1.270)intergenic (+42/‑17) csgA/csgC curlin subunit, amyloid curli fibers, cryptic/curli assembly protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 186 total aligned reads displayed.

TGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAG  >  NC_000913/1104824‑1105020
                                                                                                  |                                                                                                   
tGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGaa                                                                                                    >  2:2446982/1‑100 (MQ=255)
 gACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGaaa                                                                                                   >  1:1420487/1‑100 (MQ=255)
   ccAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACGTCATTTGTATTACAGAAACa                                                                                                 <  1:2152185/100‑1 (MQ=255)
   ccAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACa                                                                                                 <  2:2682624/100‑1 (MQ=255)
   ccAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACa                                                                                                 >  1:1938672/1‑100 (MQ=255)
     aGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAgg                                                                                               <  2:2974652/100‑1 (MQ=255)
     aGACTGCATCCAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAgg                                                                                               <  2:1203986/100‑1 (MQ=255)
      gACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAggg                                                                                              <  2:560661/100‑1 (MQ=255)
      gACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAggg                                                                                              <  1:2771299/100‑1 (MQ=255)
       aCTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGgc                                                                                             >  1:543525/1‑100 (MQ=255)
        cTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGgcg                                                                                            <  1:3012921/100‑1 (MQ=255)
         tGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGgcgc                                                                                           >  2:1812125/1‑100 (MQ=255)
          gCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCa                                                                                          <  2:1139028/100‑1 (MQ=255)
           cATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCaa                                                                                         <  2:1870088/100‑1 (MQ=255)
              cTAACTCCTCCGTCAACGTGACTCAGCTTGGCTTTGGTAACAACCCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGcc                                                                                      <  1:640625/100‑1 (MQ=255)
                aaCTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCt                                                                                    >  2:2349038/1‑100 (MQ=255)
                  ctcctcCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTg                                                                                   <  1:1385958/99‑1 (MQ=255)
                  ctcctcCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑t                                                                                 >  2:945384/1‑100 (MQ=255)
                  ctcctcCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑t                                                                                 >  1:2580111/1‑100 (MQ=255)
                     ctccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑tttt                                                                              >  2:2773117/1‑100 (MQ=255)
                        cGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑ttttttt                                                                           >  1:2648625/1‑100 (MQ=255)
                         gTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑tttttttt                                                                          >  2:1733589/1‑100 (MQ=255)
                          tCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTc                                                                         <  1:2682576/100‑1 (MQ=255)
                           cAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTc                                                                         >  1:2635096/1‑99 (MQ=255)
                           cAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCg                                                                        >  2:1102401/1‑100 (MQ=255)
                           cAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCg                                                                        <  1:2232967/100‑1 (MQ=255)
                           cAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCg                                                                        >  1:972309/1‑100 (MQ=255)
                           cAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCg                                                                        <  2:216340/100‑1 (MQ=255)
                           cAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCg                                                                        >  2:2120729/1‑100 (MQ=255)
                            aaCGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCgg                                                                       >  2:669194/1‑100 (MQ=255)
                            aaCGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCgg                                                                       <  2:2946749/100‑1 (MQ=255)
                            aaCGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCgg                                                                       <  2:2403148/100‑1 (MQ=255)
                             aCGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCggg                                                                      <  1:1006980/100‑1 (MQ=255)
                                tGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCGTCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGgaga                                                                   >  2:2479297/1‑100 (MQ=255)
                                 gACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTTGGGagaa                                                                  <  2:1017696/100‑1 (MQ=255)
                                  aCTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGagaag                                                                 <  1:1394949/100‑1 (MQ=255)
                                  aCTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGagaag                                                                 >  1:2623391/1‑100 (MQ=255)
                                  aCTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGagaag                                                                 <  1:1123495/100‑1 (MQ=255)
                                  aCTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGagaag                                                                 >  1:760806/1‑100 (MQ=255)
                                   cTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGagaaga                                                                <  1:2375194/100‑1 (MQ=255)
                                      aGGTTGGCTTTGGTAACAACGCGACCGCTGATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAata                                                             <  1:1301182/100‑1 (MQ=255)
                                      aGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAata                                                             <  2:1346443/100‑1 (MQ=255)
                                       ggTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAatat                                                            >  2:2499405/1‑100 (MQ=255)
                                       ggTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAatat                                                            >  2:776600/1‑100 (MQ=255)
                                        gTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATg                                                           >  2:2831791/1‑100 (MQ=255)
                                        gTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATg                                                           <  1:2923480/100‑1 (MQ=255)
                                        gTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATg                                                           <  2:2266610/100‑1 (MQ=255)
                                         ttGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGa                                                          <  1:1977768/100‑1 (MQ=255)
                                            gCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATa                                                       <  2:591107/100‑1 (MQ=255)
                                            gCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATa                                                       >  2:3137260/1‑100 (MQ=255)
                                            gCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATa                                                       >  2:3137162/1‑100 (MQ=255)
                                             cTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATAc                                                      >  2:30590/1‑100 (MQ=255)
                                             cTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATAc                                                      >  1:3101046/1‑100 (MQ=255)
                                              tttGGTAACAACGCGACCGCTCATCAGTACTATTACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACg                                                     <  1:3255251/100‑1 (MQ=255)
                                               ttGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGt                                                    <  1:117676/100‑1 (MQ=255)
                                                 ggTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGtta                                                  >  2:246408/1‑100 (MQ=255)
                                                  gTAACAACGCCACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGttat                                                 <  2:3522876/100‑1 (MQ=255)
                                                   tAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGCGAAGAATATGAATACGttatt                                                >  2:759290/1‑100 (MQ=255)
                                                   tAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGttatn                                                <  2:1750397/100‑2 (MQ=255)
                                                    aacaacGCGACCGCTCACCAGTACTAATACATCATTTTTATAACAGAAACAGGGCGAAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGttatt                                                <  1:2459936/99‑1 (MQ=255)
                                                         cgcgACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCt                                          <  2:863310/100‑1 (MQ=255)
                                                             aCCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCg                                      <  1:1816811/100‑1 (MQ=255)
                                                              ccGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTTTTTTTAAGAATATGAATACGTTATTACTCCTTGCg                                      >  1:1672178/1‑99 (MQ=255)
                                                              ccGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCgg                                     <  2:2286123/100‑1 (MQ=255)
                                                                gCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCa                                   >  1:1017771/1‑100 (MQ=255)
                                                                gCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCa                                   >  2:2063219/1‑100 (MQ=255)
                                                                 cTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCAc                                  >  1:2710064/1‑100 (MQ=255)
                                                                   catcaGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACtt                                >  2:148908/1‑100 (MQ=255)
                                                                   catcaGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACtt                                >  2:453661/1‑100 (MQ=255)
                                                                   catcaGTACTAATACATCATTTGTATCACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACtt                                <  2:3279749/100‑1 (MQ=255)
                                                                    atcaGTACTAATACATCATTTGTATTACAGAAACAGGGCGCACGCCCTG‑TTTTTTTTAGGGAGAAGAATATGAATCCGTTATTACTCCTTGCGGCACttt                               <  1:2810970/100‑1 (MQ=255)
                                                                      cttccgatctACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTcc                             <  1:3459219/91‑1 (MQ=255)
                                                                       aGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCa                            >  2:1531908/1‑100 (MQ=255)
                                                                          aCTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCTGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTc                         >  1:210325/1‑100 (MQ=255)
                                                                           cTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTTGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCa                        >  2:3064967/1‑100 (MQ=255)
                                                                           cTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCa                        >  1:1395185/1‑100 (MQ=255)
                                                                           cTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCa                        >  2:2031839/1‑100 (MQ=255)
                                                                           cTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCa                        <  2:543527/100‑1 (MQ=255)
                                                                            gatctcatcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCa                        <  2:647816/95‑1 (MQ=255)
                                                                             aaTACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAg                       <  1:1131239/99‑1 (MQ=255)
                                                                             aaTACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGa                      <  1:388033/100‑1 (MQ=255)
                                                                             aaTACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGa                      <  2:1420494/100‑1 (MQ=255)
                                                                               tACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATa                    <  2:2580128/100‑1 (MQ=255)
                                                                                 catcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCaagatc                   >  1:647814/1‑95 (MQ=255)
                                                                                 catcatTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTTTTTATAATAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAAc                  >  1:16119/1‑100 (MQ=255)
                                                                                 catcatTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAAc                  >  1:510187/1‑100 (MQ=255)
                                                                                 catcatTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAAc                  >  1:830881/1‑100 (MQ=255)
                                                                                  atcatTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAAcc                 >  1:3279059/1‑100 (MQ=255)
                                                                                   tcatTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCt                <  1:1912152/100‑1 (MQ=255)
                                                                                        tcccgaaaaaaaaCAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAAt           >  1:1864104/11‑100 (MQ=255)
                                                                                           aTTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACg        >  2:2914716/1‑100 (MQ=255)
                                                                                           aTTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTCCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGCCACTTTCCAGTCAGATAACCTTTAATACg        >  1:2119245/1‑100 (MQ=255)
                                                                                              aCAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGAcc     >  2:1296854/1‑100 (MQ=255)
                                                                                              aCAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGAcc     >  1:205512/1‑100 (MQ=255)
                                                                                               cAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGAccc    >  1:3323632/1‑100 (MQ=255)
                                                                                               cAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGAccc    >  2:3386381/1‑100 (MQ=255)
                                                                                               cAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGAccc    >  2:2206701/1‑100 (MQ=255)
                                                                                               cAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGAccc    >  2:2104195/1‑100 (MQ=255)
                                                                                                aGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCa   <  2:1199827/100‑1 (MQ=255)
                                                                                                 gAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAg  >  2:2120341/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
TGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAG  >  NC_000913/1104824‑1105020

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.