New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2788660 =189 (1.340)6 (0.050) 6/176 16.9 3.5% intergenic (+11/‑325) ygaQ/csiD uncharacterized protein; putative enzyme/carbon starvation protein
?NC_000913 2788688 = 162 (1.300)intergenic (+39/‑297) ygaQ/csiD uncharacterized protein; putative enzyme/carbon starvation protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 176 total aligned reads displayed.

GGGCGTAGCGCTCTTCTTTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTAATGTTAACTCCCCCTAACCTGTT  >  NC_000913/2788590‑2788787
                                                                                                  |                                                                                                   
gggCGTAGCGCTCTTCTTTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGataat                                                                                                    >  2:1241854/1‑100 (MQ=255)
 ggCGTAGCGCTCTTCTTTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGataata                                                                                                   <  1:2005558/100‑1 (MQ=255)
  gCGTAGCGCTCTTCTTTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAatat                                                                                                  <  2:1290028/100‑1 (MQ=255)
   cGTAGCGCTCTTCTTTTATAGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATg                                                                                                 <  1:3326633/100‑1 (MQ=255)
       gcgcTCTTCTTTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATgttta                                                                                             <  2:80904/100‑1 (MQ=255)
       gcgcTCTTCTTTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATgttta                                                                                             <  1:1460571/100‑1 (MQ=255)
       gcgcTCTTCTTTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATgttta                                                                                             >  2:2347020/1‑100 (MQ=255)
        cgcTCTTCTTTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATgtttag                                                                                            <  2:2246032/100‑1 (MQ=255)
          ctctTCTTTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATgtttagtt                                                                                          >  2:2111452/1‑100 (MQ=255)
           tcttctTTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATgtttagttt                                                                                         <  1:1126373/100‑1 (MQ=255)
           tcttctTTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATgtttagttt                                                                                         <  2:424144/100‑1 (MQ=255)
            cttcttTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATgtttagtt                                                                                          >  1:2916565/1‑98 (MQ=255)
             ttcttTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTAc                                                                                       <  1:1867142/100‑1 (MQ=255)
              tcttTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACt                                                                                      >  1:3475741/1‑100 (MQ=255)
               cttTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTa                                                                                     >  2:3006200/1‑100 (MQ=255)
                ttttAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTaa                                                                                    >  2:1925012/1‑100 (MQ=255)
                 tttAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAAc                                                                                   <  2:1724003/100‑1 (MQ=255)
                  ttAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACg                                                                                  <  1:1353347/100‑1 (MQ=255)
                   tAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACgg                                                                                 >  1:3276816/1‑100 (MQ=255)
                   tAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACgg                                                                                 <  1:303272/100‑1 (MQ=255)
                    aGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGt                                                                                >  2:961113/1‑100 (MQ=255)
                    aGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGt                                                                                <  1:1085719/100‑1 (MQ=255)
                       gAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAATCGGGGCAGATAATATGTTTAGTTTACTAACGGTCAt                                                                             >  2:2471850/1‑100 (MQ=255)
                       gAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCAt                                                                             >  2:1601847/1‑100 (MQ=255)
                         aaaCAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCAttt                                                                           >  1:3445715/1‑100 (MQ=255)
                            cAGGAGAGCCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGc                                                                        >  1:3053719/1‑100 (MQ=255)
                            cAGGAGAACCGCCGAACTATCTCTATTTATGATGTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACAGTCATTTTGc                                                                        >  1:2307443/1‑100 (MQ=255)
                            cAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGc                                                                        <  1:2625347/100‑1 (MQ=255)
                            cAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGc                                                                        <  2:3364563/100‑1 (MQ=255)
                             aGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCa                                                                       <  1:251579/100‑1 (MQ=255)
                             aGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCa                                                                       >  2:1415879/1‑100 (MQ=255)
                              ggAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAg                                                                      <  2:2887530/100‑1 (MQ=255)
                              ggAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAg                                                                      >  1:562596/1‑100 (MQ=255)
                                 gaACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGa                                                                   <  2:874857/100‑1 (MQ=255)
                                   aCCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACTGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAg                                                                 <  1:1952065/100‑1 (MQ=255)
                                   aCCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAg                                                                 >  1:2689227/1‑100 (MQ=255)
                                   aCCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAg                                                                 <  2:2080208/100‑1 (MQ=255)
                                   aCCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAg                                                                 >  2:2338183/1‑100 (MQ=255)
                                           aCTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAATACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTan                                                         <  2:3409811/100‑2 (MQ=255)
                                             tATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTg                                                       >  2:178823/1‑100 (MQ=255)
                                              aTCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGt                                                      <  1:99637/100‑1 (MQ=255)
                                              aTCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGt                                                      >  2:200826/1‑100 (MQ=255)
                                                ctctATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGttt                                                    >  2:977132/1‑100 (MQ=255)
                                                 tctATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGtttt                                                   >  1:1362788/1‑100 (MQ=255)
                                                 tctATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGtttt                                                   >  2:1635289/1‑100 (MQ=255)
                                                 tctATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGtttt                                                   >  2:3137098/1‑100 (MQ=255)
                                                 tctATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGtttt                                                   <  2:2850585/100‑1 (MQ=255)
                                                   tATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGtttttt                                                 >  1:2344374/1‑100 (MQ=255)
                                                   tATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGtttttt                                                 >  2:2435704/1‑100 (MQ=255)
                                                    aTTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTa                                                >  2:705733/1‑100 (MQ=255)
                                                     tttATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTAt                                               <  2:207221/100‑1 (MQ=255)
                                                      ttATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATc                                              <  1:493545/100‑1 (MQ=255)
                                                      ttATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATc                                              <  1:1629747/100‑1 (MQ=255)
                                                       tataATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCg                                             >  1:3211997/1‑100 (MQ=255)
                                                         taATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGTTAATATGTTTAGTTTACTACCGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGAc                                           <  1:1921328/100‑1 (MQ=255)
                                                          aaTTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGAcc                                          <  2:531729/100‑1 (MQ=255)
                                                           aTTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAGCGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCg                                             >  1:2811464/1‑96 (MQ=255)
                                                           aTTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCa                                         >  2:1524990/1‑100 (MQ=255)
                                                           aTTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCa                                         >  2:3366225/1‑100 (MQ=255)
                                                           aTTGAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGAcc                                          <  1:1371543/99‑1 (MQ=255)
                                                            tttAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAg                                        >  2:2127934/1‑100 (MQ=255)
                                                            tttAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAg                                        <  2:2843560/100‑1 (MQ=255)
                                                            tttAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAg                                        <  1:1020162/100‑1 (MQ=255)
                                                                 tGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAAt                                   >  2:1890542/1‑100 (MQ=255)
                                                                 tGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAAt                                   <  1:805099/100‑1 (MQ=255)
                                                                 tGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAAt                                   <  1:1752018/100‑1 (MQ=255)
                                                                 tGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAAt                                   <  1:2203788/100‑1 (MQ=255)
                                                                 tGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAAt                                   >  1:255695/1‑100 (MQ=255)
                                                                  gTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAAtn                                  <  1:1761942/100‑2 (MQ=255)
                                                                  gTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATc                                  <  1:2127918/100‑1 (MQ=255)
                                                                  gTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATc                                  >  2:787125/1‑100 (MQ=255)
                                                                  gTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATc                                  <  2:160472/100‑1 (MQ=255)
                                                                     atatCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGt                               <  1:3137077/100‑1 (MQ=255)
                                                                       atCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTtc                             >  2:2179934/1‑100 (MQ=255)
                                                                        tCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTGACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTtct                            <  1:2471834/100‑1 (MQ=255)
                                                                          tGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAGCGGTCATTTTGCAGTGAAGGCATTTACTGTTTTTTATCGACCAGATAATCTGTTctct                          >  1:1918959/1‑100 (MQ=255)
                                                                          tGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTctct                          <  1:848946/100‑1 (MQ=255)
                                                                          tGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTctct                          >  2:719412/1‑100 (MQ=255)
                                                                           gCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTa                         >  2:3307167/1‑100 (MQ=255)
                                                                           gCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTa                         >  1:871189/1‑100 (MQ=255)
                                                                           gCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTa                         >  1:43258/1‑100 (MQ=255)
                                                                            ccccGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTaa                        >  2:470815/1‑100 (MQ=255)
                                                                            ccccGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACAAGATAATCTGTTCTCTaa                        >  1:3376872/1‑100 (MQ=255)
                                                                              ccGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTAATg                      <  1:1246592/100‑1 (MQ=255)
                                                                               cGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTAATGt                     >  1:1793540/1‑100 (MQ=255)
                                                                                gATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTAATGtt                    <  1:2659007/100‑1 (MQ=255)
                                                                                 aTAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTAATGTTa                   <  1:705730/100‑1 (MQ=255)
                                                                                 aTAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTAATGTTa                   <  1:470813/100‑1 (MQ=255)
                                                                                    aaaCGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTTTAATGTTAAc                 >  1:3283019/1‑99 (MQ=255)
                                                                                    aaaCGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTAATGTTAACt                >  2:3217868/1‑100 (MQ=255)
                                                                                     aaCGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTAATGTTAACTc               >  1:1680271/1‑100 (MQ=255)
                                                                                     aaCGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTAATGTTAACTc               >  2:2016816/1‑100 (MQ=255)
                                                                                       cGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTAATGTTAACTccc             <  2:255696/100‑1 (MQ=255)
                                                                                       cGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTAATGTTAACTccc             >  1:3404918/1‑100 (MQ=255)
                                                                                         gggCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTAATGTTAACTccccc           >  1:2714217/1‑100 (MQ=255)
                                                                                             aGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTAATGTTAACTCCCCCTAAc       >  1:1343925/1‑100 (MQ=255)
                                                                                              gATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTAATGTTAACTCCCCCTAAcc      <  2:3084078/100‑1 (MQ=255)
                                                                                                taataTGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTAATGTTAACTCCCCCTAACCTg    >  1:1570069/1‑100 (MQ=255)
                                                                                                  atatGTTTAGTTTACTAACGGTCATTTTGCAGTGCAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTAATGTTAACTCCCCCTAACCTGtt  >  2:1390828/1‑100 (MQ=255)
                                                                                                  atatGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTAATGTTAACTCCCCCTAACCTGtt  >  2:1767998/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
GGGCGTAGCGCTCTTCTTTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGCAGTGAAGCCATTTACTGTTTTTTATCGACCAGATAATCTGTTCTCTAATGTTAACTCCCCCTAACCTGTT  >  NC_000913/2788590‑2788787

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.