| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,115,627 | C→T | intergenic (‑137/+35) | mdtG ← / ← lpxL | putative drug efflux system protein/lauryl‑acyl carrier protein (ACP)‑dependent acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,115,627 | 0 | C | T | 99.2% | 446.7 / ‑4.7 | 126 | intergenic (‑137/+35) | mdtG/lpxL | putative drug efflux system protein/lauryl‑acyl carrier protein (ACP)‑dependent acyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (53/72); total (54/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 126 total aligned reads displayed.
AAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATA > NC_000913/1115531‑1115719 | agaaAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGa < 1:436846/100‑1 (MQ=255) agaaAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGa > 1:99256/1‑100 (MQ=255) gaaAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGAt < 1:2364335/100‑1 (MQ=255) aaaaGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATg > 2:3114593/1‑100 (MQ=255) aaaGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGc < 2:2620364/100‑1 (MQ=255) aaGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGcc > 1:875538/1‑100 (MQ=255) aaGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGcc > 1:2395696/1‑100 (MQ=255) aaGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGACCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCgg > 1:875623/1‑95 (MQ=255) aGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCa < 2:2237176/100‑1 (MQ=255) gATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCAt < 2:887837/100‑1 (MQ=255) aaGCACACTAATTATGCGCGCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCt < 1:144557/100‑1 (MQ=255) aGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTg < 1:1077896/100‑1 (MQ=255) aGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTg > 1:1852552/1‑100 (MQ=255) aGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTg > 1:764024/1‑100 (MQ=255) gatctcTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGa < 1:1289852/95‑1 (MQ=255) gCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGa < 1:1215461/100‑1 (MQ=255) gCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGa < 2:3282712/100‑1 (MQ=255) cacaCTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGaa > 2:1089105/1‑100 (MQ=255) cacTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGc > 2:1388057/1‑100 (MQ=255) cacTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGc > 1:509241/1‑100 (MQ=255) cacTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGc > 1:3203425/1‑100 (MQ=255) cacTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGc > 1:2565444/1‑100 (MQ=255) cTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAgatc > 2:1289856/1‑97 (MQ=255) cTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCAt < 2:1980098/100‑1 (MQ=255) tAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATc < 2:1214177/100‑1 (MQ=255) aaTTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATcc > 2:1610350/1‑100 (MQ=255) aTTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCg < 1:3149150/100‑1 (MQ=255) aTGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCa > 2:3374016/1‑100 (MQ=255) gcgcCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATg < 1:1889698/100‑1 (MQ=255) cgcCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATgg > 1:2997578/1‑100 (MQ=255) gcCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATggg < 2:2914531/100‑1 (MQ=255) gcCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATggg < 1:2946534/100‑1 (MQ=255) ccGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGgag > 2:790170/1‑100 (MQ=255) gACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGAt < 2:780614/100‑1 (MQ=255) gACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCCAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGAt < 1:2366462/100‑1 (MQ=255) ttCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTa < 2:2446293/100‑1 (MQ=255) tCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTaa < 2:1218978/100‑1 (MQ=255) ccAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAAt > 2:2420455/1‑100 (MQ=255) ccAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAAt < 1:3478530/100‑1 (MQ=255) cAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATa > 2:2184775/1‑100 (MQ=255) gggggCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGc < 1:791019/100‑1 (MQ=255) gggggCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGc > 1:2658955/1‑100 (MQ=255) gggggCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGc > 1:2651953/1‑100 (MQ=255) ggggCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCg < 2:1270718/100‑1 (MQ=255) ggCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTg < 1:437192/100‑1 (MQ=255) gcgcAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGa < 1:3116598/100‑1 (MQ=255) cgcAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGaa < 2:512899/100‑1 (MQ=255) gcAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAg < 2:47519/100‑1 (MQ=255) gcAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAg < 2:365019/100‑1 (MQ=255) gcAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATCCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAg > 1:1756026/1‑100 (MQ=255) gcAATCCAGAGAGCTCTTATCGCTGAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCAATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAg < 2:373352/100‑1 (MQ=255) aTCCAGATGTCTTTTATCGCTACATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAgg < 2:3158538/98‑1 (MQ=255) tCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAAc < 2:3226049/100‑1 (MQ=255) ccAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACg > 1:440071/1‑100 (MQ=255) ccAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACg > 2:3072426/1‑100 (MQ=255) cAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGc > 1:2895872/1‑100 (MQ=255) agagagCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAAc < 1:1664729/97‑1 (MQ=255) gagagCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCt > 2:1522520/1‑100 (MQ=255) cTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCgg > 1:3306555/1‑100 (MQ=255) ttttATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCggg < 2:349974/100‑1 (MQ=255) ttttATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCggg > 1:940957/1‑100 (MQ=255) ttttATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCggg < 2:3250237/100‑1 (MQ=255) ttttATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCggg < 2:3095764/100‑1 (MQ=255) ttATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCg < 2:3127171/100‑1 (MQ=255) tATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCgt > 1:2885852/1‑100 (MQ=255) aTCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCgtg > 1:1808184/1‑100 (MQ=255) aTCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCgtg < 2:2167065/100‑1 (MQ=255) tCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCgtgt < 1:1239975/100‑1 (MQ=255) cGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGtt > 1:984483/1‑100 (MQ=255) cGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGtt < 1:1089101/100‑1 (MQ=255) gCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGttt > 2:1054130/1‑100 (MQ=255) tAAATCAGGGGGATTTGCTGTGGTAATGTCGGTTGCCATACTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTa < 1:2475822/100‑1 (MQ=255) aaaTCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTaa < 2:509243/100‑1 (MQ=255) aaaTCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTaa > 2:2056094/1‑100 (MQ=255) aaaTCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTaa > 1:267740/1‑100 (MQ=255) aaTCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTaaa < 2:1657706/100‑1 (MQ=255) aTCAGGGGGATTTGCTGTGGTAATGTCTGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAg < 1:1909267/100‑1 (MQ=255) aTCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAg < 2:2528161/100‑1 (MQ=255) aTCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAg < 2:828918/100‑1 (MQ=255) aTCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAg < 2:80490/100‑1 (MQ=255) cAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCg < 2:1295773/100‑1 (MQ=255) gggggATTTGCTGTGGTAATGTCGGATGCCATCCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGAc < 2:1756040/100‑1 (MQ=255) ggggATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACg > 1:2489354/1‑100 (MQ=255) gggATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACgg < 2:20199/100‑1 (MQ=255) gATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGgtg < 2:826741/100‑1 (MQ=255) gATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGgtg < 1:3149784/100‑1 (MQ=255) gATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGgtg > 1:3291055/1‑100 (MQ=255) gATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGgtg < 2:2400431/100‑1 (MQ=255) aTTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGgtgt > 2:229453/1‑100 (MQ=255) tttGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTa > 1:2062279/1‑100 (MQ=255) tGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAAc < 2:440072/100‑1 (MQ=255) gCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAAcc > 2:744952/1‑100 (MQ=255) gCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGCTGTAAcc < 2:1852567/100‑1 (MQ=255) cTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACca > 1:2208085/1‑100 (MQ=255) gtgGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACcaca < 2:367836/100‑1 (MQ=255) gtgGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACcaca > 1:1210802/1‑100 (MQ=255) gtgGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACcaca < 1:103003/100‑1 (MQ=255) gtgGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACcaca > 1:1044564/1‑100 (MQ=255) tgGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACat < 1:1388051/100‑1 (MQ=255) ggTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACata < 1:3373993/100‑1 (MQ=255) | AAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATA > NC_000913/1115531‑1115719 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |