| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,248,432:1 | (G)5→6 | 100% | coding (660/663 nt) | yqjA → | general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,248,427 | 1 | . | G | 71.3% | 236.0 / 107.9 | 94 | coding (655/663 nt) | yqjA | general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter |
| Reads supporting (aligned to +/- strand): ref base . (16/11); new base G (44/23); total (60/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
CCAGCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGG > NC_000913/3248330‑3248522 | ccAGCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gg > 1:618733/1‑100 (MQ=255)ccAGCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gg > 2:2131734/1‑100 (MQ=255) cAGCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑ggg > 1:1092559/1‑100 (MQ=255) ctcTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gggg < 1:153776/98‑1 (MQ=255) atcTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gggg < 1:631772/98‑1 (MQ=255) gcggATGTCATGCCTGATGTTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGGTCTCTGGTCGTTTTATGGAAAAAGAAATATGGAAATC‑ggcg < 2:1112015/96‑3 (MQ=255) gCTGGTGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGTAGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gggg < 2:2921713/99‑1 (MQ=255) gCTGATGTCATGTCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gggg‑g < 2:2541820/100‑1 (MQ=255) gCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gggg‑g > 1:790103/1‑100 (MQ=255) gCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gggg‑g < 1:2939586/100‑1 (MQ=255) cTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑ggggag > 2:153774/1‑98 (MQ=255) tGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑Ta < 1:53479/100‑1 (MQ=255) gTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAgg < 1:2766014/100‑1 (MQ=255) gTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAgg > 1:992103/1‑100 (MQ=255) tCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAggg > 2:2506804/1‑100 (MQ=255) tCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAggg < 1:1902755/100‑1 (MQ=255) cATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGa > 2:1217712/1‑100 (MQ=255) cATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGAt > 2:524272/1‑100 (MQ=255) cATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGAt > 1:104254/1‑100 (MQ=255) aggcgtGATGCGGCTCTCGGTGGTGCTGCTGGTGTGTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAggg < 2:2528647/93‑1 (MQ=255) tGCCTGGTGCTGCTCCTGGTGGTGCTGATGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGATATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAgg < 2:1133183/96‑1 (MQ=255) ccTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGGTG‑TAAGGGATGCa < 1:2048360/100‑1 (MQ=255) tGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGGTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCa < 2:594811/97‑1 (MQ=255) tgctgcTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATAc > 2:2439680/1‑100 (MQ=255) tgctgcTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATAc < 1:858391/100‑1 (MQ=255) tgctgcTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATAc > 1:39223/1‑100 (MQ=255) tgctgcTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATAcc > 2:1386241/1‑100 (MQ=255) tgctCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCt > 2:565438/1‑99 (MQ=255) tgctCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTc > 1:880333/1‑100 (MQ=255) gctCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCg < 1:747803/100‑1 (MQ=255) ctCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCa > 2:1024763/1‑100 (MQ=255) ggtggtGCTGCTGGTGTTTGGCCTGGCAGGTTCTCGGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTc < 1:1035522/100‑1 (MQ=255) tggtgCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGc > 1:2741243/1‑100 (MQ=255) tgctgcTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCg > 1:1117478/1‑100 (MQ=255) gctgctGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCg < 1:2585844/100‑1 (MQ=255) gctgctGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCg > 1:618873/1‑100 (MQ=255) gctgGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTAGCCa > 2:1112952/1‑100 (MQ=255) ctgGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCa > 2:1996048/1‑99 (MQ=255) ctgGTGTTTGGCCTGGCAGGTTCTCTGGTCGTATTATGGTAAGAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAg < 2:2182522/100‑1 (MQ=255) cgggTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAg > 1:2114564/3‑100 (MQ=255) ggTGTTTTGCCTGGCAGGTTCTCTGGTGGCGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCGAATACCTCGCATGTCGCTTCGCCAGc < 2:2893215/99‑1 (MQ=255) ggTGTTTGGCCCGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCt > 2:1434975/1‑100 (MQ=255) gtgtTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTa < 1:2864801/100‑1 (MQ=255) gtgtTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAGATACCTCGCATGTCGCTTCGCCAGCTAg > 2:362314/1‑100 (MQ=255) gtgtTTGGCCTGGCAGGGTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTa < 2:2741215/100‑1 (MQ=255) tgtTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAg > 1:474096/1‑100 (MQ=255) gtTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGc > 1:521388/1‑100 (MQ=255) gtTGGGGCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGcc < 2:784809/100‑1 (MQ=255) tgtGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGcc < 1:1609412/98‑1 (MQ=255) ggCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTgg < 1:2262727/100‑1 (MQ=255) ggCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTgg > 1:2651533/1‑100 (MQ=255) gCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGt > 1:700993/1‑100 (MQ=255) gCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑GAAGGGATGCAAATACCTCGCATGTCGCTTCGCGAGATAGcat > 2:2438504/1‑95 (MQ=255) ccTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTc > 1:1522324/1‑100 (MQ=255) cTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTcc > 1:2223515/1‑100 (MQ=255) tGGCAGGTTGTCGGGTCGTGTTATGGAAACAGTAAGATGTATATCGGGGG‑G‑TACGGGTTGCAAATAAATCGCATGGCGCTTCGCCAGCTAGCCTgg < 2:1429199/96‑1 (MQ=255) tGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCgg < 1:524274/100‑1 (MQ=255) gggaGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTcc < 2:239130/94‑1 (MQ=255) ggCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGgc > 1:1009593/1‑100 (MQ=255) gCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCggn < 2:1006150/100‑2 (MQ=255) gTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGt > 1:3063532/1‑100 (MQ=255) ctctGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAGGGGATGCAAATACCTAGCATGTCGCTTCGCAAGCTAGCCTGGTCCGGCGCTGttt > 2:746873/1‑100 (MQ=255) ctctGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGttt > 1:1574131/1‑100 (MQ=255) tctGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGtttt > 1:817390/1‑100 (MQ=255) tGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTAc > 1:2555426/1‑100 (MQ=255) ggtggtGTGATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTAc < 2:2542426/98‑1 (MQ=255) ggTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACt > 1:2818210/1‑100 (MQ=255) ggTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACt > 2:1238480/1‑100 (MQ=255) ggTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACtt > 1:2070919/1‑100 (MQ=255) tCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTc > 2:1820819/1‑100 (MQ=255) cGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCt < 1:1460067/100‑1 (MQ=255) tgtTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTgg < 1:2447302/100‑1 (MQ=255) gtTAAGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTgg > 2:2668473/1‑99 (MQ=255) ttATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGGTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCg > 2:409556/1‑100 (MQ=255) tATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCgg < 1:1386250/100‑1 (MQ=255) tGGAAAAAGAAATATGGAAATC‑GGGG‑GATAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGc > 1:682998/1‑100 (MQ=255) ggAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCa > 1:1531390/1‑100 (MQ=255) gAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCAc > 1:276037/1‑100 (MQ=255) aaaaGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGc > 2:1187470/1‑100 (MQ=255) aaaaGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATAACTCGCATGTCGCTTCGCCAGCTAGCCTGGTCAGGCGCTGTTTTACTTCTGGTCGGc > 2:692616/1‑96 (MQ=255) aaaaGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCt > 1:1569124/1‑100 (MQ=255) aaGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGt < 2:2415290/100‑1 (MQ=255) gAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGtt > 2:317063/1‑100 (MQ=255) aaTATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGc > 1:2550932/1‑100 (MQ=255) aaTATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGc < 1:1092824/100‑1 (MQ=255) atatGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCt > 1:1079209/1‑100 (MQ=255) atatGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCt > 1:2340561/1‑100 (MQ=255) atatGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTg > 1:1188785/1‑100 (MQ=255) tatGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTg < 1:937499/100‑1 (MQ=255) atGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCCCGCTGTTGCTgg > 2:1788916/1‑100 (MQ=255) tGGAAATCGGGGG‑G‑TAAGGGATGCAAATATCTCGCCTGTCGCTTCGCCAGCTAGCCTGGTGCGGCGGTGGTTTATTTCTGGTCGGCACGCTGTTGCt > 2:529707/1‑97 (MQ=255) tGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGc > 1:1940677/1‑100 (MQ=255) tGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGc < 2:521386/100‑1 (MQ=255) tGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGcc > 1:321248/1‑100 (MQ=255) ggAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGcc < 1:317065/100‑1 (MQ=255) ggAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCGTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGcc < 1:609420/100‑1 (MQ=255) gAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCt > 1:1075046/1‑100 (MQ=255) aaaTCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCGGTTGCTGGc > 2:39408/1‑97 (MQ=255) aaaTC‑GGGG‑G‑TAAGGGATGCACATACCTCGCATGTCGCTTCGCCTGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTgg < 1:2481782/100‑1 (MQ=255) aaaTC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTg > 1:30659/1‑99 (MQ=255) | CCAGCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGG > NC_000913/3248330‑3248522 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |