| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4606703 | 121 (1.110) | 12 (0.120) | 5/168 | NT | 9.5% | coding (998/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent |
| ? | NC_000913 | = 4606716 | 114 (1.110) | coding (985/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
CTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4606600‑4606703‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCT < NC_000913/4606716‑4606618 CTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATG < 1:441066/100‑1 AACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGC > 2:3039547/1‑100 AACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGC > 1:1933362/1‑100 ACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCG < 1:2423977/100‑1 CGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGC > 1:673085/1‑100 GATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCAT < 1:1654298/100‑1 GATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCAT < 1:2835752/100‑1 ATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATT < 1:1126099/100‑1 ATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATT < 2:1274404/100‑1 ATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCAT < 1:1855609/99‑1 AAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATTAT < 2:2200509/100‑1 GCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATTATGAC < 1:2506734/100‑1 GCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATTATGAC < 2:2792511/100‑1 GCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATTATGAC < 2:2678969/100‑1 GCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTCTCTTCGCCCGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATTATGgc < 2:280903/100‑3 CGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATTATGACC < 2:768228/100‑1 CGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATTATGACC < 1:1741842/100‑1 GGCGCTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCG > 1:2832100/1‑100 GGCGCTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCG < 1:2173330/100‑1 CGCTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGAC > 2:1356622/1‑100 CGCTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGAC < 1:2199470/100‑1 CTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCT > 2:1852735/1‑100 CTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCT > 1:485802/1‑100 CTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCT > 1:1845665/1‑100 CTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCT > 2:752616/1‑100 CTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACC < 2:760556/99‑1 CTTCAAGGTGTATCGCGCCATTATGAACCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCT > 1:1898311/1‑100 CTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4606600‑4606703‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCT < NC_000913/4606716‑4606618 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |