New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 225895NA (NA)36 (0.360) 12/164 NT NA noncoding (137/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 225899 NA (NA)noncoding (141/2904 nt) rrlH 23S ribosomal RNA of rrnH operon

Only 100 of 150 total aligned reads displayed.

CCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/225790‑225895
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtgtgtCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTC  <  NC_000913/225899‑225801
                                                                                                                                                                                                             
CCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCA                                                                                                           >  2:200923/1‑100
CCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCA                                                                                                           >  1:1556969/1‑100
 CTGGTAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAG                                                                                                          >  1:2917069/1‑100
 CTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAG                                                                                                          <  1:1145074/100‑1
 CTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAG                                                                                                          <  1:1283397/100‑1
 CTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAG                                                                                                          >  1:1337582/1‑100
 CTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAG                                                                                                          >  1:1340099/1‑100
 CTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAG                                                                                                          <  2:1951469/100‑1
 CTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAG                                                                                                          >  1:204840/1‑100
  TGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAGGCGTCGGTAAGGTGATATGAACCATTATAAACGGCGATTTCCGAATGGGGAAAACCAGT                                                                                                         >  2:1851327/1‑100
  TGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGT                                                                                                         <  1:1890400/100‑1
  TGGCAGTCAGAGGCGATGAAGGACGTACTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGT                                                                                                         <  2:42721/100‑1
   GGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTn                                                                                                        <  2:2508345/100‑2
   GGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTG                                                                                                        <  1:1666688/100‑1
   GGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTG                                                                                                        <  2:2548996/100‑1
   GGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTG                                                                                                        <  2:2721275/100‑1
   GGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTG                                                                                                        <  2:1904269/100‑1
   GGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTG                                                                                                        <  1:2497443/100‑1
   GGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTG                                                                                                        <  1:2626836/100‑1
   GGCAGTCAGAGGAGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTG                                                                                                        <  2:2637893/100‑1
    GCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGT                                                                                                       <  2:1090390/100‑1
     CAGTCAGAGGCGATGAAGGACGTGTTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGTGAAACCCAGTGTG                                                                                                      <  1:2108190/100‑1
     CAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTG                                                                                                      >  1:2862297/1‑100
     CAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTG                                                                                                      <  2:2261246/100‑1
     CAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTG                                                                                                      >  1:717348/1‑100
     CAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTG                                                                                                      <  1:1098449/100‑1
     CAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTG                                                                                                      >  2:1262590/1‑100
      AGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGT                                                                                                     >  1:626481/1‑100
                  TGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTG                                                                                         <  1:97027/100‑1
                  TGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTG                                                                                         <  1:838512/100‑1
                  TGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTG                                                                                         <  2:12177/100‑1
                   GAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTGG                                                                                        <  1:960330/100‑1
                   GAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTGG                                                                                        <  1:107672/100‑1
                   GAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTGG                                                                                        <  1:3072155/100‑1
                   GAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTGG                                                                                        <  1:2819893/100‑1
                   GAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTGG                                                                                        <  1:1796896/100‑1
                   GAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTGG                                                                                        <  1:1492684/100‑1
                    AAGGACGTGCTAATCTGCGATAAGTGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTGGG                                                                                       <  1:2968698/100‑1
                    AAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTGGG                                                                                       <  2:147876/100‑1
                    AAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTGGG                                                                                       <  2:2109096/100‑1
                    AAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTGGG                                                                                       <  2:941402/100‑1
                    AAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTGGG                                                                                       <  1:51987/100‑1
                    AAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTGGG                                                                                       <  1:1603355/100‑1
                    AAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTGGG                                                                                       <  1:2697900/100‑1
                     AGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTGGG                                                                                       <  1:907610/99‑1
                     AGGACGTGCTAATCCGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTGGGT                                                                                      <  2:2114281/100‑1
                      GGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTCGAAACACACTGGGTT                                                                                     <  1:1659149/100‑1
                                       atctGCGTAGGTAAGGGGATATGAACCGTGATAAACGGCGATTTCCGAGTGGCGAAACCCAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAAT                                                                      <  2:646878/94‑1
                                                              AACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCAC                                             >  1:1859708/1‑100
                                                                                TTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTGGGTTTCGCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTAT                              >  2:2012117/1‑97
                                                                                         GGGGAAACCCAGTGTGTTTCGACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCA                  >  2:2420088/1‑100
                                                                                          GGGAAACCCAGTGTGTTTCGACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCAC                 >  2:2930417/1‑100
                                                                                             tcttccgatcTGTCGAAACACACTGGGTTTCCCCATTTGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTC              <  1:1725540/90‑1
                                                                                               ACCCAGTGTGTTTCGACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATAGCACCTTACCGACGCTTATCGCAGATTAGCACGTCCT            >  2:2454913/1‑100
                                                                                                CCCAGTGTGTTTCGACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTT           >  2:737402/1‑100
                                                                                                   AGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCAT        >  2:514402/1‑100
                                                                                                   AGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCAT        >  2:602779/1‑100
                                                                                                   AGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCAT        <  2:1349241/100‑1
                                                                                                   AGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCAT        <  2:1180854/100‑1
                                                                                                   AGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCAT        >  1:125677/1‑100
                                                                                                    GTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATC       >  2:2326173/1‑100
                                                                                                    GTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATC       >  1:423522/1‑100
                                                                                                    GTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATC       <  2:266797/100‑1
                                                                                                    GTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATC       >  1:2787856/1‑100
                                                                                                    GTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATC       >  2:307217/1‑100
                                                                                                    GTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATC       <  2:1317046/100‑1
                                                                                                    GTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCAGTTATAACGGTTCATATCAGCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCAcc       >  2:1693011/1‑98
                                                                                                    GTGTGTCCAAACACACTGGGTTTCCCCATTCGGAAATCGCCGATTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATC       <  2:2564284/100‑1
                                                                                                     TGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCG      >  2:478128/1‑100
                                                                                                     TGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCG      >  1:1447748/1‑100
                                                                                                     TGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCG      >  1:2441886/1‑100
                                                                                                     TGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCG      <  1:426348/100‑1
                                                                                                      GTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGC     <  2:548602/100‑1
                                                                                                      GTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGC     >  1:2388681/1‑100
                                                                                                      GTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGC     >  2:2135931/1‑100
                                                                                                      GTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGC     >  2:1480971/1‑100
                                                                                                       TGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATGTCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCC    >  1:2743025/1‑100
                                                                                                       TGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCC    <  2:30893/100‑1
                                                                                                       TGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCC    >  1:2215247/1‑100
                                                                                                       TGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCC    <  2:40140/100‑1
                                                                                                       TGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCC    <  1:1057625/100‑1
                                                                                                       TGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCC    >  2:2197829/1‑100
                                                                                                       TGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCC    <  1:5797/100‑1
                                                                                                       TGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCC    <  1:307219/100‑1
                                                                                                       TGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCC    <  1:2869881/100‑1
                                                                                                       TGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCC    <  2:1348353/100‑1
                                                                                                       TGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCC    <  1:2456073/100‑1
                                                                                                       TGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCC    <  1:62389/100‑1
                                                                                                        GTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATCACGGTTCCTATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCT   >  2:1276437/1‑100
                                                                                                        GTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCT   >  2:1849385/1‑100
                                                                                                        GTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCT   >  2:2959689/1‑100
                                                                                                        GTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCT   >  2:1578337/1‑100
                                                                                                        GTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCT   >  2:2718478/1‑100
                                                                                                        GTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCT   >  2:1077412/1‑100
                                                                                                        GTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCT   >  1:737183/1‑100
                                                                                                        GTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCCGTTATAACGGTTCATATCACCTTACCGCCGCTTATCGCAGATTAGCACGTCCTTCATCGCC    <  2:1168296/99‑1
                                                                                                         TCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTC  >  2:400285/1‑100
                                                                                                         TCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTC  >  2:2279837/1‑100
                                                                                                         TCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTAAAACGGTTCATATCACCTTAGCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTC  >  2:1693626/1‑100
                                                                                                         TCGAAACACACTGGGTTTCCCCATTCGGAAATCGACGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCGTTCGTCGCCTC  <  2:1630974/100‑1
                                                                                                                                                                                                             
CCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/225790‑225895
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtgtgtCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTC  <  NC_000913/225899‑225801

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.