New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3277819 =NA (NA)10 (0.100) 7/162 NT NA noncoding (1/29 nt) REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3277844 = NA (NA)noncoding (26/29 nt) REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 139 total aligned reads displayed.

ATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGG  >  NC_000913/3277723‑3277918
                                                                                                |                                                                                                   
aTTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCccgccg                                                                                                  >  1:2026809/1‑100 (MQ=255)
   cAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAAc                                                                                               <  1:2998564/100‑1 (MQ=255)
     gCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGc                                                                                             >  1:2666616/1‑100 (MQ=255)
        aaaTGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCAtt                                                                                          >  1:2663745/1‑100 (MQ=255)
            gTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTc                                                                                         >  2:1402448/1‑97 (MQ=255)
             ttAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCgtgt                                                                                     <  1:2024130/100‑1 (MQ=255)
              tAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGtt                                                                                    >  1:1896085/1‑100 (MQ=255)
              tAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGtt                                                                                    <  2:2163182/100‑1 (MQ=255)
              tAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGtt                                                                                    >  1:2976252/1‑100 (MQ=255)
               aaaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCgtg                                                                                      >  2:1106736/1‑97 (MQ=255)
               aaaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTg                                                                                   <  1:2017829/100‑1 (MQ=255)
               aaaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTg                                                                                   <  1:558277/100‑1 (MQ=255)
                aaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGtt                                                                                    >  2:3110568/1‑98 (MQ=255)
                aaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGa                                                                                  <  2:919572/100‑1 (MQ=255)
                 aaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGAc                                                                                 >  1:1772575/1‑100 (MQ=255)
                  aaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGAcn                                                                                <  2:2882476/100‑2 (MQ=255)
                     agGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGC                                                                             >  1:2900736‑M2/1‑100 (MQ=255)
                      ggACATCCTCCTGCCGACTGGGAAACCCTCACCCGCGAAACCGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTgccaa                                                                               >  2:506173/1‑93 (MQ=255)
                      ggACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCG                                                                            >  1:684761‑M2/1‑100 (MQ=255)
                        gcggatagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCggg                                                                          >  2:2676990‑M1/73‑100 (MQ=255)
                        aCATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGG                                                                          <  2:213967‑M2/100‑1 (MQ=255)
                        aCATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTAGACCAGCGGG                                                                          <  2:2041106‑M2/100‑1 (MQ=255)
                         cATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGC                                                                         >  1:2425125‑M2/1‑100 (MQ=255)
                          ggatagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACTCATTCGTGTTGACCAGCGGGCa                                                                        >  2:1807246‑M1/71‑100 (MQ=255)
                           gatagcctggaaggactgcgagaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCAt                                                                       >  2:2906874‑M1/70‑100 (MQ=255)
                           gatagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCAt                                                                       >  1:1928135‑M1/70‑100 (MQ=255)
                            atagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATc                                                                      >  1:756034‑M1/69‑100 (MQ=255)
                             tagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagataggatgcccGCCGAACGCATTCGTGTTGCCCAGCGGGCATcc                                                                     >  1:2106192‑M1/68‑100 (MQ=255)
                                 tGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtc                                                                 <  1:1647569/100‑1 (MQ=255)
                                 tGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtc                                                                 <  1:556839/100‑1 (MQ=255)
                                  gCCGACTGGGAAACCCTCACCCGAGAAACCGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGTACGCATTCGTGTTGACCAGCGGGCATCCTTtct                                                                <  2:1872088/100‑1 (MQ=255)
                                  gCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtct                                                                <  1:2902187/100‑1 (MQ=255)
                                   ggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtctc                                                               >  1:2240782‑M1/62‑100 (MQ=255)
                                   ccGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtctc                                                               <  2:1427481/100‑1 (MQ=255)
                                   ccGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtctc                                                               <  2:689795/100‑1 (MQ=255)
                                   ccGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtctc                                                               <  2:2995679/100‑1 (MQ=255)
                                    cGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGAACAGCAGACATCCTTTCTCa                                                              >  2:1181446/1‑100 (MQ=255)
                                        tGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTcc                                                          <  2:1766939/100‑1 (MQ=255)
                                         gggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTccn                                                         <  2:2544360/100‑2 (MQ=255)
                                         gggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTccc                                                         >  1:976863/1‑100 (MQ=255)
                                           gAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCg                                                       >  1:1152256/1‑100 (MQ=255)
                                              gaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGAcc                                                    >  1:2386296‑M1/51‑100 (MQ=255)
                                               cccTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCa                                                   >  1:2577321/1‑100 (MQ=255)
                                                tccgatctgagaaacagaagAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCattgtgaacaccatcaatgggtt                                                  >  2:678691‑M2/9‑77 (MQ=255)
                                                ccTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCCACCAg                                                  >  2:394396/1‑100 (MQ=255)
                                                 cTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGa                                                 <  2:1783633/100‑1 (MQ=255)
                                                   cACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAAt                                               >  1:1198948/1‑100 (MQ=255)
                                                    aCCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCattgtgaacaccatcaatgggtttctt                                              <  1:1480482‑M2/100‑28 (MQ=255)
                                                     cccGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCa                                             >  1:1112954/1‑100 (MQ=255)
                                                     cccGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCa                                             >  1:160280/1‑100 (MQ=255)
                                                     cccGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCa                                             >  1:215217/1‑100 (MQ=255)
                                                      ccGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCAc                                            >  1:437750/1‑100 (MQ=255)
                                                       cGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACt                                           <  2:1712893/100‑1 (MQ=255)
                                                       cGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACt                                           <  1:3005515/100‑1 (MQ=255)
                                                        gagaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCattgtgaacaccatcaatgggttagatcgga                                          <  1:678693‑M2/100‑32 (MQ=255)
                                                        gagaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACtt                                          <  1:2185773/100‑1 (MQ=255)
                                                        gagaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACtt                                          <  1:2632409/100‑1 (MQ=255)
                                                        gagaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACtt                                          >  1:937523/1‑100 (MQ=255)
                                                         agaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTc                                         <  1:1881898/100‑1 (MQ=255)
                                                         agaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTc                                         <  1:159186/100‑1 (MQ=255)
                                                          gaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCa                                        >  2:1538510/1‑100 (MQ=255)
                                                             aCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAcc                                     <  1:694620/100‑1 (MQ=255)
                                                             aCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAc                                      <  2:297816/99‑1 (MQ=255)
                                                             aCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAc                                      >  1:276434/1‑99 (MQ=255)
                                                                 aagaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAg                                 >  1:283302/1‑100 (MQ=255)
                                                                  agaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGc                                <  1:449600/100‑1 (MQ=255)
                                                                     aaCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCtt                             >  2:538679/1‑100 (MQ=255)
                                                                      aCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCttt                            <  1:2041123/100‑1 (MQ=255)
                                                                      aCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCttt                            <  1:213969/100‑1 (MQ=255)
                                                                      aCCCATTGATGGTGTTCACAATGCCCGCCGAAATCATTCGTGTTGACCAGGGGGGATACTTTCTCACTCCACGACCAGAATCACTTCAACCCTAGCCttt                            >  2:1440118/1‑100 (MQ=255)
                                                                       cccATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTc                           >  1:608014/1‑100 (MQ=255)
                                                                        ccATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCg                          <  2:276432/100‑1 (MQ=255)
                                                                        ccATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCg                          <  1:941439/100‑1 (MQ=255)
                                                                         cATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGc                         >  1:1857414/1‑100 (MQ=255)
                                                                         cATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGc                         >  1:887786/1‑100 (MQ=255)
                                                                           ttGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAg                       <  1:2227971/100‑1 (MQ=255)
                                                                           ttGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAg                       >  2:922139/1‑100 (MQ=255)
                                                                           ttGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAg                       <  1:2955246/100‑1 (MQ=255)
                                                                              aTGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTcc                    <  1:1028433/100‑1 (MQ=255)
                                                                              aTGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTcc                    <  2:24506/100‑1 (MQ=255)
                                                                                  tgtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTcc                <  2:1749168/100‑1 (MQ=255)
                                                                                   gtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCa               <  1:1541188/100‑1 (MQ=255)
                                                                                    ttCACAGTGCCCGCCCAGCGCATTCGTGTTGACCAGCGGGCATCCTTACCGACGCCCCGACCAGAATCACTTAGGCCCCAGCCTGTCGCAGTCCTTCCan              <  2:2537504/100‑2 (MQ=255)
                                                                                    ttCACAATCCCCGTCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACGCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAg              <  1:592204/100‑1 (MQ=255)
                                                                                      cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc            >  2:13909/1‑100 (MQ=255)
                                                                                      cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc            >  2:12269/1‑100 (MQ=255)
                                                                                      cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc            <  1:889249/100‑1 (MQ=255)
                                                                                      cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc            <  1:1538521/100‑1 (MQ=255)
                                                                                      cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc            >  2:422828/1‑100 (MQ=255)
                                                                                        caATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCattgtgaacaccatcaatgggtttcttctgtttctcgggtgagggtttcccagtcggcaggag          <  1:1511236‑M2/100‑64 (MQ=255)
                                                                                        caATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTa          <  1:12269/100‑1 (MQ=255)
                                                                                        caATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTa          <  1:13909/100‑1 (MQ=255)
                                                                                        caATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATACTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTa          >  1:1627827/1‑100 (MQ=255)
                                                                                          atgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATc        <  1:3060761‑M1/94‑1 (MQ=255)
                                                                                          aTGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCattgtgaacaccatcaatgggtttcttctgtttctcgggtgagggtttcccagtcggcaggagga        <  1:1231981‑M2/100‑66 (MQ=255)
                                                                                           tgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATc        <  2:1473120‑M1/94‑1 (MQ=255)
                                                                                            gcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCg      >  2:679036‑M1/5‑100 (MQ=255)
                                                                                             cccGCCGAACGCATTCTTGTTGACCAGCTGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGc     <  2:2647746‑M1/97‑1 (MQ=255)
                                                                                             cccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGc     >  1:1333108‑M1/4‑100 (MQ=255)
                                                                                                GCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAgg  >  1:2405322‑M1/1‑100 (MQ=255)
                                                                                                |                                                                                                   
ATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGG  >  NC_000913/3277723‑3277918

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.