| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3620614 | NA (NA) | 14 (0.140) | 9/166 | NT | 100% | coding (1423/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | = 3620635 | 0 (0.000) | coding (1444/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
ATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCT > NC_000913/3620531‑3620713 | aTGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCC > 2:2229416‑M2/1‑100 (MQ=255)aTGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCC > 1:1818202‑M2/1‑100 (MQ=255)aTGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTGTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCC > 2:1073899‑M2/1‑100 (MQ=255) tggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGA > 2:1522777‑M2/1‑100 (MQ=255) tggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGA > 2:121361‑M2/1‑100 (MQ=255) tggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGA < 1:145016‑M2/100‑1 (MQ=255) ggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGAC < 1:2782788‑M2/100‑1 (MQ=255) ggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGAC < 1:692150‑M2/100‑1 (MQ=255) ggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGAC < 1:2412062‑M2/100‑1 (MQ=255) ggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGAC > 2:560203‑M2/1‑100 (MQ=255) ggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGA > 2:125013‑M2/1‑99 (MQ=255) gtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACG < 1:224176‑M2/100‑1 (MQ=255) gtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACG < 2:2578809‑M2/100‑1 (MQ=255) gggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGT‑GGCTGACGttaac > 2:488470‑M2/1‑95 (MQ=255) ggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaact > 1:1242314‑M2/1‑94 (MQ=255) ggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaact > 2:2716062‑M2/1‑94 (MQ=255) gCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACATCCAGTTAACGTCAGGCCCGGT‑GGCTGACGttaactg > 1:701476‑M2/1‑93 (MQ=255) ccTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaactgg > 1:2628772‑M2/1‑92 (MQ=255) ccTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaactgg > 1:656555‑M2/1‑92 (MQ=255) cTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaactggt > 1:1100312‑M2/1‑91 (MQ=255) accacAGCCAGTTAACGTCAGCCACCGG‑GCCTGACGttaactggctgtggtggttatagtaaaacgccgatgccctgccatccggcgtggtgatgcgcgt < 1:1278783‑M2/100‑65 (MQ=255) ttAACGTCAGCCACCGG‑GCCTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccg < 1:1282744‑M2/100‑76 (MQ=255) tAACGTCAGCCACCGG‑GCCTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgt < 2:852123‑M2/100‑77 (MQ=255) tAACGTCAGCCACCGG‑GCCTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgt < 1:1190310‑M2/100‑77 (MQ=255) aaCGTCAGCCACCGG‑GCCTGACGttcactggttgtggtggttatagtaacacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtc < 2:1990538‑M2/100‑78 (MQ=255) aaCGTCAGCCACCGG‑GCCTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtc < 2:1951645‑M2/100‑78 (MQ=255) aaCGTCAGCCACCGG‑GCCTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaagcccgtc < 2:1608915‑M2/100‑78 (MQ=255) aCGTCAGCCACCGG‑GCCTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtca < 1:2370150‑M2/100‑79 (MQ=255) | ATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCT > NC_000913/3620531‑3620713 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |