New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3622540 =NA (NA)22 (0.210) 8/168 NT 100% coding (3349/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 3622556 = 0 (0.000)coding (3365/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

GTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTG  >  NC_000913/3622448‑3622599
                                                                                            |                                                           
gccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGAACGTGAAATCCTGGCTGCCCGGGTGAGTGAGGAAAGCGGCCgctggct                                                      >  2:2274870‑M2/50‑100 (MQ=255)
     gatttcactttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCAt                                                 >  1:1274212‑M2/45‑100 (MQ=255)
       tttcactttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGGGGAAAGCCGCCGCTGGCTGGCATCg                                               >  2:1710966‑M2/43‑100 (MQ=255)
       tttcactttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCg                                               >  1:2657128‑M2/43‑100 (MQ=255)
          tcactttccagccggtcgagcatctgcaccgtgccggcgGGCAAGTGAAATCCTGGCTGACTGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGc                                            >  2:1699425‑M2/40‑100 (MQ=255)
          cactttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGc                                            >  1:1567941‑M2/40‑100 (MQ=255)
            ctttccagccggtcgagcatctgcaccagcaccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGGGAGGAAAGCCGCCGCTGGCTGGCATCGCGCgg                                          >  1:2275106‑M2/38‑100 (MQ=255)
            ctttccagccggtcgagcatctgcaccagcaccggctGGAAACTGAACTCCTAGCTGACCGGGTGAGTGATGAAAGCCGCCGCTGACTGGAATCGTGc                                            >  2:454359‑M2/38‑98 (MQ=255)
            ctttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                          >  1:2113719‑M2/38‑100 (MQ=255)
            ctttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                          >  1:2488618‑M2/38‑100 (MQ=255)
            ctttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                          >  2:2771206‑M2/38‑100 (MQ=255)
            ctttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                          >  1:1786347‑M2/38‑100 (MQ=255)
            actttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                          >  2:2643762‑M2/38‑100 (MQ=255)
             ctttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGc                                         >  1:637348‑M2/37‑100 (MQ=255)
              tttccagccggtcgagcatctgcaccgtgccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGcc                                        >  1:2994224‑M2/36‑100 (MQ=255)
               tccagccggtcgagcatctgcaccagcaccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCt                                       >  2:524045‑M2/35‑100 (MQ=255)
               tccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCt                                       >  2:2548373‑M2/35‑100 (MQ=255)
                ccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTg                                      >  2:304992‑M2/34‑100 (MQ=255)
                 ccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGa                                     >  2:1280160‑M2/33‑100 (MQ=255)
                                                 GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGAccc      >  1:2067792‑M2/1‑99 (MQ=255)
                                                 GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCg     >  2:92889‑M2/1‑100 (MQ=255)
                                                 GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCg     >  2:1766262‑M2/1‑100 (MQ=255)
                                                 GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCg     <  2:1801828‑M2/100‑1 (MQ=255)
                                                 GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCg     >  1:2067989‑M2/1‑100 (MQ=255)
                                                  GAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCgg    <  2:1931035‑M2/100‑1 (MQ=255)
                                                    AAGTGAAATCCTGGCTGACCGGGTTAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgtg  <  1:2839781‑M2/100‑1 (MQ=255)
                                                    AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgtg  <  2:2243980‑M2/100‑1 (MQ=255)
                                                    AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgtg  <  2:3014056‑M2/100‑1 (MQ=255)
                                                    AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgtg  <  1:1273394‑M2/100‑1 (MQ=255)
                                                    AAGTGAAAGCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgtg  <  2:971629‑M2/100‑1 (MQ=255)
                                                                                            |                                                           
GTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTG  >  NC_000913/3622448‑3622599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.