New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4240157 =NA (NA)7 (0.070) 5/164 NT NA noncoding (1/37 nt) REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 4240190 = NA (NA)noncoding (34/37 nt) REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 153 total aligned reads displayed.

TTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACA  >  NC_000913/4240059‑4240254
                                                                                                  |                                                                                                 
ttCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGc                                                                                                  <  2:675623/100‑1 (MQ=255)
 cgcaaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagctcgcctccaccaaagccggatatacctacccgtagGcc                                                                                                 >  2:1664712‑M1/98‑100 (MQ=255)
 cgcaaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGcc                                                                                                 >  1:888714‑M1/98‑100 (MQ=255)
  ccAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCg                                                                                                >  2:319271/1‑100 (MQ=255)
   caaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCgg                                                                                               <  2:539104‑M1/5‑1 (MQ=255)
   caaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCgg                                                                                               >  1:1651784‑M1/96‑100 (MQ=255)
   cAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCgg                                                                                               >  1:213980/1‑100 (MQ=255)
    agagGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGa                                                                                              <  1:2376397/100‑1 (MQ=255)
    agagGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGa                                                                                              >  2:1180010/1‑100 (MQ=255)
    agagGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGa                                                                                              >  1:1795196/1‑100 (MQ=255)
     gagGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGAt                                                                                             <  1:1211934/100‑1 (MQ=255)
     aaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGAt                                                                                             >  2:2439080‑M1/94‑100 (MQ=255)
     aaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGAt                                                                                             >  2:2427732‑M1/94‑100 (MQ=255)
     aaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGAt                                                                                             >  1:3051532‑M1/94‑100 (MQ=255)
       ggAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATgc                                                                                           <  2:563771/100‑1 (MQ=255)
          aCATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGcgcc                                                                                        >  1:1767792/1‑100 (MQ=255)
           cATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGcgccg                                                                                       >  2:809984/1‑100 (MQ=255)
             ttGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGcgccgct                                                                                     <  1:1710409/100‑2 (MQ=255)
               gTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAg                                                                                   >  1:1919199/1‑100 (MQ=255)
                 cGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGgc                                                                                 <  1:2030805/100‑1 (MQ=255)
                 cGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGgc                                                                                 >  1:763393/1‑100 (MQ=255)
                  gatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGATGCGCCGCCAGgcg                                                                                >  1:1156413‑M1/81‑100 (MQ=255)
                     ttttCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCgg                                                                             <  2:2411324/100‑1 (MQ=255)
                      tttCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGc                                                                            <  2:305625/100‑1 (MQ=255)
                      tttCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATGACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGc                                                                            <  2:1767637/100‑1 (MQ=255)
                       ttCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCt                                                                           >  2:409907/1‑100 (MQ=255)
                            ttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGATGCGCCGCCAGGCGCGGCTTATcc                                                                      >  1:2272573‑M1/71‑100 (MQ=255)
                             cATTGCTGGTGGCTGGGAATCGCCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGTCGCGGCTTATCCg                                                                     <  1:2112300/100‑1 (MQ=255)
                              aTTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCgg                                                                    <  2:2321201/100‑1 (MQ=255)
                               ttGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGc                                                                   <  1:2196713/100‑1 (MQ=255)
                               ttGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGc                                                                   <  2:2226300/100‑1 (MQ=255)
                               tgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGc                                                                   >  1:1087610‑M1/68‑100 (MQ=255)
                                tGCTGGTGGCTGGGAATCACCTGGATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATcc                                                                      <  2:2471497/96‑1 (MQ=255)
                                tGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGcc                                                                  <  1:409909/100‑1 (MQ=255)
                                tGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGcc                                                                  <  2:2877250/100‑1 (MQ=255)
                                 gCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCt                                                                 >  1:327032/1‑100 (MQ=255)
                                  cTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTa                                                                <  2:2677030/100‑1 (MQ=255)
                                    ggtggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTAc                                                               >  1:2121699/1‑99 (MQ=255)
                                    ggtggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACg                                                              <  2:1471135/100‑1 (MQ=255)
                                     gtggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACgg                                                             <  2:183360/100‑1 (MQ=255)
                                      tggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACggg                                                            <  2:2515243/100‑1 (MQ=255)
                                      gttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACggg                                                            >  1:984685‑M1/61‑100 (MQ=255)
                                         cTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtag                                                         >  2:1450119/1‑100 (MQ=255)
                                         cTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTATGGTGCGGTTTGGCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCAACggg                                                            <  2:2516015/97‑1 (MQ=255)
                                          tGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGAGGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtagg                                                        <  2:551126/100‑1 (MQ=255)
                                           gggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggt                                                       >  1:1705669/1‑100 (MQ=255)
                                           gggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggt                                                       <  1:310844/100‑1 (MQ=255)
                                            ggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggta                                                      >  1:1261919/1‑100 (MQ=255)
                                            gatctCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggta                                                      <  2:690478/96‑1 (MQ=255)
                                                tCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATc                                                  >  1:2451168/1‑100 (MQ=255)
                                                 cACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtcggtaagatc                                                 >  1:690480/1‑95 (MQ=255)
                                                      gAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCtt                                            >  1:342071/1‑100 (MQ=255)
                                                       aaTGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCttt                                           <  2:1705654/100‑1 (MQ=255)
                                                         tggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtgg                                         <  1:1433602‑M1/59‑1 (MQ=255)
                                                          gggTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggt                                        <  1:621472/100‑1 (MQ=255)
                                                           ggTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtg                                       >  1:685321/1‑100 (MQ=255)
                                                            gttaTTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtg                                       <  2:2696376/96‑1 (MQ=255)
                                                            gTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtgg                                      >  1:1867780/1‑100 (MQ=255)
                                                            gTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtgg                                      >  1:2059097/1‑100 (MQ=255)
                                                            gTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtgg                                      >  2:2426534/1‑100 (MQ=255)
                                                             tGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtgg                                      >  2:1802242/1‑99 (MQ=255)
                                                             tGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGa                                     <  1:921235/100‑1 (MQ=255)
                                                             tGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGa                                     <  1:2130453/100‑1 (MQ=255)
                                                             tGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGa                                     >  1:510359/1‑100 (MQ=255)
                                                              gATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAg                                    <  1:1180017/100‑1 (MQ=255)
                                                                tttttGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGgc                                  >  2:2029221/1‑100 (MQ=255)
                                                                  tttGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCAAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGgcgc                                >  2:1731637/1‑100 (MQ=255)
                                                                    tGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGgcgcgc                              <  1:1129536/100‑1 (MQ=255)
                                                                     gAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTTTTCGGTCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGTGCt                             >  2:2735732/1‑100 (MQ=255)
                                                                     gAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCt                             <  2:3015064/100‑1 (MQ=255)
                                                                     gAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCt                             >  1:111790/1‑100 (MQ=255)
                                                                     cgatctccGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCt                             <  2:926841/94‑1 (MQ=255)
                                                                      aaTTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGCGGCGCGCTc                            >  1:351920/1‑100 (MQ=255)
                                                                      aaTTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGgcgcgc                              >  2:96144/1‑98 (MQ=255)
                                                                       aTTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTcc                           <  2:2275310/100‑1 (MQ=255)
                                                                       aTTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTcc                           >  2:1377529/1‑100 (MQ=255)
                                                                       aTTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTcc                           >  1:2451796/1‑100 (MQ=255)
                                                                           ccGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCtagatcg                       >  1:926845/1‑94 (MQ=255)
                                                                             ggCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATcc                     <  2:213978/100‑1 (MQ=255)
                                                                             ggCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATcc                     <  2:1277759/100‑1 (MQ=255)
                                                                               cTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCTCGTCTTAGCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGA‑gcgcgcctccaccaa                     <  2:2918797/97‑10 (MQ=255)
                                                                                tttGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAgg                  <  1:2662670/100‑1 (MQ=255)
                                                                                    gTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGa              >  1:262514/1‑100 (MQ=255)
                                                                                       cgttttGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAAc            <  2:1146874/96‑1 (MQ=255)
                                                                                       cGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCGCGCCTAGGGGTAGGTATATCCGGCTTTGGTGTAGGCGCGCTCCAAATCCAGGTTGAACa           <  2:770267/100‑1 (MQ=255)
                                                                                       cGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACa           <  2:1905903/100‑1 (MQ=255)
                                                                                        ggTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGGAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaa          >  1:2912198/1‑100 (MQ=255)
                                                                                         gTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaa         <  2:1261910/100‑1 (MQ=255)
                                                                                          tttGTCTTGCCGGATGCGCCGCCAGGCGCGGCCTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaaa        <  2:1216817/100‑1 (MQ=255)
                                                                                           ttGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAAc       <  2:1938841/100‑1 (MQ=255)
                                                                                             gTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACAt     >  1:846150/1‑100 (MQ=255)
                                                                                             gTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACAt     <  1:2413369/100‑1 (MQ=255)
                                                                                              tCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATa    <  1:2807410/100‑1 (MQ=255)
                                                                                               cTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATac   >  1:539106/1‑100 (MQ=255)
                                                                                               cTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATac   <  2:2451144/100‑1 (MQ=255)
                                                                                               cTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATac   >  2:575919/1‑100 (MQ=255)
                                                                                               cTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATac   <  1:175943/100‑1 (MQ=255)
                                                                                               cTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATac   >  1:1690452/1‑100 (MQ=255)
                                                                                               cTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTCGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATac   <  2:883368/100‑1 (MQ=255)
                                                                                                ttGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATaca  >  1:761624/1‑100 (MQ=255)
                                                                                                  |                                                                                                 
TTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACA  >  NC_000913/4240059‑4240254

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.