New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 213635NA (NA)4 (0.040) 4/164 NT NA noncoding (4/37 nt) REP15 (repetitive extragenic palindromic) element; contains 1 REP sequences REP15 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 213668 NA (NA)noncoding (37/37 nt) REP15 (repetitive extragenic palindromic) element; contains 1 REP sequences REP15 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 128 total aligned reads displayed.

GCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTT  >  NC_000913/213536‑213733
                                                                                                   |                                                                                                  
gCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGaaa                                                                                                    >  1:1689528/1‑100 (MQ=255)
 cTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAg                                                                                                   <  1:397529‑M1/100‑2 (MQ=255)
  tGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgc                                                                                                  <  2:1441794‑M1/100‑3 (MQ=255)
  tGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGAGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAg                                                                                                   <  2:2286665‑M1/99‑2 (MQ=255)
   gATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgcc                                                                                                 >  1:543656‑M1/1‑97 (MQ=255)
   gATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgcc                                                                                                 >  1:378630‑M1/1‑97 (MQ=255)
     ttGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccgg                                                                                               <  1:177038‑M1/100‑6 (MQ=255)
     ttGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccgg                                                                                               >  1:2801338‑M1/1‑95 (MQ=255)
      tGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccgga                                                                                              <  1:1118441‑M1/100‑7 (MQ=255)
      tGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccgga                                                                                              <  1:1942814‑M1/100‑7 (MQ=255)
       gcggcgGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccggat                                                                                             >  2:1007096‑M1/1‑93 (MQ=255)
        cggcggCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATa                                                                                            <  2:1444264/100‑1 (MQ=255)
        cggcggCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATa                                                                                            >  1:1577789/1‑100 (MQ=255)
        cggcggCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATa                                                                                            >  1:1579670/1‑100 (MQ=255)
            ggcAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGAc                                                                                        <  1:1301870/100‑1 (MQ=255)
             gcAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAGAACGCTTAGTTAAGTGAAAGCCGGATAAGACg                                                                                       <  2:2284466/100‑1 (MQ=255)
              cAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGc                                                                                      >  1:3019686/1‑100 (MQ=255)
               aGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCa                                                                                     <  1:59375/100‑1 (MQ=255)
                 gggTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATc                                                                                   <  2:543654/100‑1 (MQ=255)
                        tgtgACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTc                                                                            >  1:2938823/1‑100 (MQ=255)
                        tgtgACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTc                                                                            >  1:2680109/1‑100 (MQ=255)
                        tgtgACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTc                                                                            >  1:225630/1‑100 (MQ=255)
                        tgtgACGCAAGAAGGAGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTCAAGTGAAAGCCGGATAAGACGCATCAAACGTc                                                                            >  2:143541/1‑100 (MQ=255)
                         gtgACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCg                                                                           <  1:2483709/100‑1 (MQ=255)
                         gtgACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTGTGTCTGGCAGTAAACGCTTAGTTAAGTGACAGCCGGATAAGACGCATCAAACGTCg                                                                           <  2:1107985/100‑1 (MQ=255)
                           gACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCA                                                                         <  1:688343‑M2/100‑1 (MQ=255)
                           gACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTGGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATACGACGCATCAAACGTCGCA                                                                         <  2:669845‑M2/100‑1 (MQ=255)
                               cAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCG                                                                     <  2:3032108‑M2/100‑1 (MQ=255)
                                aagaagGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGAGAAGACGCATCAAACGTCgagatcgg                                                                    >  2:2595013/1‑93 (MQ=255)
                                 agaagGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccggatgcgacgtttgatgcgtcttatccggc                                                                   <  1:1521286‑M1/100‑34 (MQ=255)
                                 agaagGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGC                                                                   <  1:1826932‑M2/100‑1 (MQ=255)
                                 agaagGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGC                                                                   >  1:2814407‑M2/1‑100 (MQ=255)
                                   aagGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccggatgcgacgtttgatgcgtcttatccggctt                                                                 <  1:1039412‑M1/100‑36 (MQ=255)
                                     ggTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccggatgcgacgtttgatgcgtcttatccggctttc                                                               <  2:1599474‑M1/100‑38 (MQ=255)
                                      gtgtGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAg                                                              <  1:2735803/100‑1 (MQ=255)
                                       tgtgGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGt                                                             >  2:1097459/1‑100 (MQ=255)
                                        gtgGCTGAAGGTGAGAATGGTGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTc                                                            <  1:2520411/100‑1 (MQ=255)
                                        gtgGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTc                                                            >  2:648763/1‑100 (MQ=255)
                                          ggCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCaa                                                          >  1:2492524/1‑100 (MQ=255)
                                          ggCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCaa                                                          >  1:1626582/1‑100 (MQ=255)
                                          ggCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCaa                                                          >  2:1111598/1‑100 (MQ=255)
                                          ggCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCaa                                                          >  2:1113399/1‑100 (MQ=255)
                                           gCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAAt                                                         <  1:1570086/100‑1 (MQ=255)
                                            cTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATc                                                        <  1:1028106/100‑1 (MQ=255)
                                            cTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATc                                                        <  1:2464200/100‑1 (MQ=255)
                                             tGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCa                                                       <  2:2403994/100‑1 (MQ=255)
                                                  gTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGAtt                                                  >  2:424272/1‑100 (MQ=255)
                                                  gTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGAtt                                                  <  1:1262586/100‑1 (MQ=255)
                                                    gagaATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCg                                                <  2:3073699/100‑1 (MQ=255)
                                                       aaTGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCtt                                             <  2:2086048/100‑1 (MQ=255)
                                                        aTGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTa                                            <  2:251729/100‑1 (MQ=255)
                                                          ggCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTacc                                          >  1:799070/1‑100 (MQ=255)
                                                          ggCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTacc                                          >  2:2057112/1‑100 (MQ=255)
                                                          ggCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTGAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTacc                                          <  1:2361603/100‑1 (MQ=255)
                                                           gCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTacca                                         <  1:577492/100‑1 (MQ=255)
                                                           gCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTacca                                         >  2:1219994/1‑100 (MQ=255)
                                                            cGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTaccac                                        >  1:2208955/1‑100 (MQ=255)
                                                             gTAAGTTTTGTCTGGCAGAAAACGCTTCGTCAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTaccac                                        <  2:617410/99‑1 (MQ=255)
                                                             gTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTaccacc                                       <  1:669137/100‑1 (MQ=255)
                                                             gTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTaccacc                                       >  2:2212395/1‑100 (MQ=255)
                                                              tAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTaccacca                                      >  2:1273871/1‑100 (MQ=255)
                                                                aGTTTTGTCTGGCAGAAAACGCTGAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGAGTCGCTTaccagcacc                                    >  2:1861351/1‑100 (MQ=255)
                                                                 gTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCg                                   >  2:765242/1‑100 (MQ=255)
                                                                 gTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCg                                   >  2:2555052/1‑100 (MQ=255)
                                                                  ttttGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGt                                  <  1:1825516/100‑1 (MQ=255)
                                                                          ggCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGAttt                          >  1:2313208/1‑100 (MQ=255)
                                                                           gCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTc                         <  1:638138/100‑1 (MQ=255)
                                                                               aaaaCGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCggg                     >  2:1680784/1‑100 (MQ=255)
                                                                               aaaaCGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCggg                     <  2:1348095/100‑1 (MQ=255)
                                                                                aaaCGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGt                    <  1:812526/100‑1 (MQ=255)
                                                                                 cttccgatcttAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTg                   <  2:433395/91‑1 (MQ=255)
                                                                                 aaCGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTg                   <  2:2115859/100‑1 (MQ=255)
                                                                                   cctgtcggccaGTGACAGCCTGATCGGACGCACCAAAGGCCGCAGCCGGCGACCGTCTATCAGGATTCTACGACCACCACCGTACCGAGTCCCGGGTGGc                 <  2:1550011/90‑1 (MQ=255)
                                                                                    gCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCt                >  1:1502314/1‑100 (MQ=255)
                                                                                    gCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCt                >  2:2243910/1‑100 (MQ=255)
                                                                                     cTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTa               >  2:830535/1‑100 (MQ=255)
                                                                                     cTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGAATTCGGGCAAAATCAATCAGGGTGTGCTTACCACCACCATACCGATTAccagctgac                 >  2:691758/1‑91 (MQ=255)
                                                                                     cTTAGTTAAGTGAAAGCCGGATAAGACGAATCAAACGTGGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCAGGGTGGCt                >  2:1793566/1‑99 (MQ=255)
                                                                                       tAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTaaa             <  1:560879/100‑1 (MQ=255)
                                                                                         gTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTaaa             >  2:228652/1‑98 (MQ=255)
                                                                                         gTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGc           >  1:2957768/1‑100 (MQ=255)
                                                                                         gTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGc           <  1:1451167/100‑1 (MQ=255)
                                                                                         gTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGc           <  1:1451175/100‑1 (MQ=255)
                                                                                         gTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGc           <  1:1500594/100‑1 (MQ=255)
                                                                                            aaGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTgg        <  2:1577776/100‑1 (MQ=255)
                                                                                            aaGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTgg        <  2:1579657/100‑1 (MQ=255)
                                                                                             aGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCtttcacttaactaagcgttttctgccagacaaaacttacgccattctcaccttcagccac       <  1:1155890‑M2/100‑61 (MQ=255)
                                                                                             aGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGt       >  1:1228593/1‑100 (MQ=255)
                                                                                             aGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGt       <  2:1330275/100‑1 (MQ=255)
                                                                                             aGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGt       >  2:775267/1‑100 (MQ=255)
                                                                                              gTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGt       >  1:1192160/1‑99 (MQ=255)
                                                                                               tGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTaa     >  2:2686237/1‑100 (MQ=255)
                                                                                                gAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCtttcacttaactaagcgttttctgccagacaaaacttacgccattctcaccttcagccacacc    <  2:1599474‑M2/100‑64 (MQ=255)
                                                                                                gAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAAt    >  1:2600046/1‑100 (MQ=255)
                                                                                                gAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAAt    >  2:1020604/1‑100 (MQ=255)
                                                                                                gAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAAt    >  2:1766251/1‑100 (MQ=255)
                                                                                                 aaaGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAAtt   >  1:1700101/1‑100 (MQ=255)
                                                                                                 aaaGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATCTCCGGGTGGCTAAAGCTGGTAAtt   >  2:180606/1‑100 (MQ=255)
                                                                                                  aaGCCGGATAAGACGCATCAAACGTCGCATCCGGCtttcacttaactaagcgttttctgccagacaaaacttacgccattctcaccttcagccacacctt  <  1:1039412‑M2/100‑66 (MQ=255)
                                                                                                  aaGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCGGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAAttt  <  1:1774321/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
GCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTT  >  NC_000913/213536‑213733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.