New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 346823NA (NA)7 (0.070) 7/168 NT NA intergenic (+64/+34) yahO/prpR periplasmic protein, function unknown, YhcN family/propionate catabolism operon regulatory protein
?NC_000913 = 346853 NA (NA)noncoding (30/30 nt) REP24 (repetitive extragenic palindromic) element; contains 1 REP sequences REP24 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 155 total aligned reads displayed.

ATCCACGGCACGGCAAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTT  >  NC_000913/346724‑346922
                                                                                                   |                                                                                                   
aTCCACGGCACGGCAAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTAT                                                                                                     >  1:2976763‑M1/1‑100 (MQ=255)
aTCCACGGCACGGCAAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTAT                                                                                                     >  1:1160273‑M1/1‑100 (MQ=255)
 tCCACGGCACGGCAAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATg                                                                                                    >  1:2302749‑M1/1‑99 (MQ=255)
    acggcacggcAAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATgcc                                                                                                  <  2:57202‑M1/99‑4 (MQ=255)
     cggcacggcaAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCgg                                                                                                <  2:1039790/100‑1 (MQ=255)
           ggcaAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAg                                                                                          <  1:509593/100‑1 (MQ=255)
            gcaAATATTTACAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGc                                                                                         <  1:1005377/100‑1 (MQ=255)
             caAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCg                                                                                        >  2:407/1‑100 (MQ=255)
               aaTATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCg                                                                                        <  1:973997/98‑1 (MQ=255)
                atatTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGtt                                                                                      >  1:168184/1‑99 (MQ=255)
                 tatTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATgccgaatgcagcgcgaa                                                                                    <  2:1336841‑M1/100‑18 (MQ=255)
                 tatTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTcg                                                                                    >  1:1182551/1‑100 (MQ=255)
                 tatTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTcg                                                                                    <  2:2389266/100‑1 (MQ=255)
                  atTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTcgc                                                                                   >  1:1450030/1‑100 (MQ=255)
                   tttATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTcgcg                                                                                  >  1:1124270/1‑100 (MQ=255)
                   tttATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTcgcg                                                                                  >  2:2754311/1‑100 (MQ=255)
                   tttATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTcgcg                                                                                  <  1:1820253/100‑1 (MQ=255)
                       taAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGc                                                                              >  1:854659/1‑100 (MQ=255)
                       taAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGc                                                                              <  1:1948706/100‑1 (MQ=255)
                         agaagaagTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCAt                                                                            <  1:1461941/100‑1 (MQ=255)
                            agaagTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCG                                                                         >  1:3073952‑M2/1‑100 (MQ=255)
                             gaagTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGG                                                                        >  2:2505336‑M2/1‑100 (MQ=255)
                             gaagTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGG                                                                        <  1:1608305‑M2/100‑1 (MQ=255)
                              aagTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTCAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGC                                                                       <  2:1207839‑M2/100‑1 (MQ=255)
                               agTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATgccgaatgcagcgcgaacgctttatccggca                                                                      <  1:1751654‑M1/100‑32 (MQ=255)
                                gTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAg                                                                     <  1:2448204/100‑1 (MQ=255)
                                gTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAg                                                                     >  2:2823723/1‑100 (MQ=255)
                                 tAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGt                                                                    <  2:1829382/100‑1 (MQ=255)
                                 tAATGCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAg                                                                     <  2:1340100/99‑1 (MQ=255)
                                     tCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAg                                                                <  2:2104717/100‑1 (MQ=255)
                                      cTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGc                                                               <  2:542006/100‑1 (MQ=255)
                                      cTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGc                                                               <  1:1290701/100‑1 (MQ=255)
                                       tGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATgccgaatgcagcgcgaacgctttatccggcataaatttc                                                              <  1:1439844‑M1/100‑40 (MQ=255)
                                       tGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCt                                                              >  2:1286406/1‑100 (MQ=255)
                                        gAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCtt                                                             <  2:749684/100‑1 (MQ=255)
                                        gAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCtt                                                             <  1:1077360/100‑1 (MQ=255)
                                         aaTCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCttt                                                            >  2:808609/1‑100 (MQ=255)
                                          aTCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCtttt                                                           >  2:2809180/1‑100 (MQ=255)
                                          aTCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCtttt                                                           >  2:2068190/1‑100 (MQ=255)
                                           tCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGTATAAAGCGTTCGCGCTGCATTCGGTAGTTCAGCTTTTc                                                          <  2:1920530/100‑1 (MQ=255)
                                           tCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTc                                                          <  1:22503/100‑1 (MQ=255)
                                            ccTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCa                                                         >  2:1748924/1‑100 (MQ=255)
                                             cTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAg                                                        <  2:822332/100‑1 (MQ=255)
                                              tATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgc                                                       >  2:929166/1‑100 (MQ=255)
                                              tATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAg                                                        <  1:2384659/99‑1 (MQ=255)
                                               aTGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgcc                                                      <  1:1567142/100‑1 (MQ=255)
                                               aTGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgcc                                                      <  2:854658/100‑1 (MQ=255)
                                                tGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATgccgaatgcagcgcgaacgctttatccggcataaatttcaatagatga                                                     <  1:226401‑M1/100‑49 (MQ=255)
                                                  tAAACATCTCCGATGCGTAAGTTTAGCGGTGATCATCTATTGAAATTTATgcctaatgcagcgcgaacgctttatccggcataaatttcaatagatgat                                                    <  2:1492302‑M1/99‑50 (MQ=255)
                                                   aaaCATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgccg                                                  <  2:547822/100‑1 (MQ=255)
                                                    aaCATCTCCGATGCGTACGTTTATCGGTGCTCATCCATTGAAATTTTTGCCAAATAGGACGTTCGCGCTGCATTCAGCAGTTCAGCTTTTCAgccgccg                                                  >  2:551616/1‑99 (MQ=255)
                                                    aaCATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgccg                                                  >  1:139751/1‑99 (MQ=255)
                                                     aCATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgccgcc                                                <  1:2192077/100‑1 (MQ=255)
                                                     aCATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgccgcc                                                <  2:2611794/100‑1 (MQ=255)
                                                      cATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCa                                               <  2:3105340/100‑1 (MQ=255)
                                                       aTCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAg                                              >  2:2976330/1‑100 (MQ=255)
                                                        tctcCGATGCGTAAGTTTATCGGTGCTCATCTATTTAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgccgcc                                                >  2:954555/1‑97 (MQ=255)
                                                         ctcCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGaa                                            <  2:520251/100‑1 (MQ=255)
                                                         ctcCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTAGGCAGTTCAGCTTTTCAGCCGCCGCCAGaa                                            >  2:2269780/1‑100 (MQ=255)
                                                           ccGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAcg                                          <  2:1714633/100‑1 (MQ=255)
                                                           ccGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAcg                                          >  2:1028352/1‑100 (MQ=255)
                                                            cGATGCGTAAGTTTATCGGTGATCATCTAGTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAcgt                                         <  2:378378/100‑1 (MQ=255)
                                                              aTGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAcgtcg                                       <  1:1236634/100‑1 (MQ=255)
                                                              aTGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAcgtcg                                       <  1:1883865/100‑1 (MQ=255)
                                                                 cGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTcc                                    >  1:267881/1‑100 (MQ=255)
                                                                  gTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCg                                   >  2:2936602/1‑100 (MQ=255)
                                                                  gTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCg                                   >  1:3101053/1‑100 (MQ=255)
                                                                  gTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCg                                   <  1:2627257/100‑1 (MQ=255)
                                                                    aaGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCTGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGc                                 <  2:1657987/100‑1 (MQ=255)
                                                                     aGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCt                                <  2:2314606/100‑1 (MQ=255)
                                                                     aGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCt                                <  2:1745705/100‑1 (MQ=255)
                                                                      gTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTg                               <  1:2613479/100‑1 (MQ=255)
                                                                         tATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATg                            <  2:2437651/100‑1 (MQ=255)
                                                                         tATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATg                            >  1:62469/1‑100 (MQ=255)
                                                                         tATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATg                            <  1:214216/100‑1 (MQ=255)
                                                                           ctggTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGcc                          <  1:2703661/98‑1 (MQ=255)
                                                                            cGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCt                         >  1:132876/1‑100 (MQ=255)
                                                                            cGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCt                         <  2:318262/100‑1 (MQ=255)
                                                                            cGGTGATCATCGATTGAAATTTATGCCGTATAAAGCGGTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCt                         >  2:456845/1‑100 (MQ=255)
                                                                             ggTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGccag                        >  2:2703633/1‑98 (MQ=255)
                                                                              gTGATCATCTATTGAAATTTATGCCGGATAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTaaa                      <  1:919615/100‑1 (MQ=255)
                                                                                gATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATACCTAaat                     >  2:497623/1‑100 (MQ=255)
                                                                                 atcatcTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTAGGCataaatttcaatagatgatcaccgctaaacttacgcatcggagatgttta                     <  2:1492302‑M2/99‑51 (MQ=255)
                                                                                   catcTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAaataat                  >  1:778484/1‑100 (MQ=255)
                                                                                   catcTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAaataat                  <  2:724375/100‑1 (MQ=255)
                                                                                     tcTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTc                <  1:398831/100‑1 (MQ=255)
                                                                                     tcTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTc                <  1:2907748/100‑1 (MQ=255)
                                                                                     tcTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCACCAGAACGTCGTCCGGCTGATGCCTAAATAATTc                >  1:1717496/1‑100 (MQ=255)
                                                                                     tcTATTGAAATTTATCCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTc                <  2:2605106/100‑1 (MQ=255)
                                                                                      cTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcg               <  2:2255062/100‑1 (MQ=255)
                                                                                      cTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcg               >  1:1145555/1‑100 (MQ=255)
                                                                                          tGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgccgc           <  2:1746860/100‑1 (MQ=255)
                                                                                          tGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgccgc           >  1:567634/1‑100 (MQ=255)
                                                                                          tGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgccgc           <  2:252902/100‑1 (MQ=255)
                                                                                           gAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCgct          >  2:891657/1‑100 (MQ=255)
                                                                                              aTTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCataaatttcaatagatgatcaccgataaacttacgcatcggagatgtttacataggattcagaa       <  2:577595‑M2/100‑65 (MQ=255)
                                                                                                 tATGCCGGATAAAGCGTTCGCGCTGCATTCGGCataaatttcaatagatgatcaccgataaacttacgcatcggagatgtttacataggattcagaatta    <  1:3028737‑M2/100‑68 (MQ=255)
                                                                                                 tATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGtt    <  2:840018/100‑1 (MQ=255)
                                                                                                  aTGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGttt   <  2:1182544/100‑1 (MQ=255)
                                                                                                   tGCCGGATAAAGCGTTCGCGCTGCATTCGGCataaatttcaatagatgatcaccgataaacttacgcatcggagatgtttacataggattcagaattact  <  1:1751654‑M2/100‑70 (MQ=255)
                                                                                                   |                                                                                                   
ATCCACGGCACGGCAAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTT  >  NC_000913/346724‑346922

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.