New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 730041 = | 0 (0.000) | 7 (0.070) | 6/168 | NT | 100% | coding (459/4194 nt) | rhsC | Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor |
? | NC_000913 | 3619682 = | NA (NA) | coding (491/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
CCTGTATTTTGAGCACCTGTTTCCCGGTGAGGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTC > NC_000913/729942‑730140 | catccgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttc < 2:455068‑M1/1‑1 (MQ=255) atccgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttcc < 1:209696‑M1/2‑1 (MQ=255) atccgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttcc < 1:2848404‑M1/2‑1 (MQ=255) atccgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttcc > 2:604106‑M1/99‑100 (MQ=255) tccgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCg > 1:1515443‑M1/98‑100 (MQ=255) tccgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCg < 1:1123170‑M1/3‑1 (MQ=255) tccgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCg > 1:2011313‑M1/98‑100 (MQ=255) tccgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCg < 1:682972‑M1/3‑1 (MQ=255) ccgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCgg < 2:2934055‑M1/4‑1 (MQ=255) ccgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCgg < 2:658157‑M1/4‑1 (MQ=255) ccgctgccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCgg < 2:1403793‑M1/4‑1 (MQ=255) cgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGc < 2:2924148‑M1/5‑1 (MQ=255) cgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGc > 1:640797‑M1/96‑100 (MQ=255) cgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGc < 1:3080428‑M1/5‑1 (MQ=255) cgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGc < 1:183018‑M1/5‑1 (MQ=255) cgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatacggacttaagcggagttcttCCGGc > 2:1728379‑M1/96‑100 (MQ=255) gcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGc < 2:2901938‑M1/5‑1 (MQ=255) cgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGCTGGCCGCACTCTGGCAGGCGCTGCCg > 1:1513989‑M1/70‑100 (MQ=255) cgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGC‑‑‑‑CGCACTCTGGCAGTCGCTGCCGgaag > 2:974585‑M1/70‑100 (MQ=255) gagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGCTGGCCGCACTCTGGCAGGCGCTGCCgg > 2:2620713‑M1/69‑100 (MQ=255) agcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGCTGGCCGCACTCTGGCAGGCGCTGCCGga > 1:1780549‑M1/68‑100 (MQ=255) gcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGCTGGCCGCACTCTGGCAGGCGCTGCCGgaa > 2:16806‑M1/67‑100 (MQ=255) cagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGCTGGCCGCACTCTGGCAGGCGCTGCCGgaag > 2:1164400‑M1/66‑100 (MQ=255) accacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTc > 1:837154‑M1/61‑100 (MQ=255) CCGGCTGGCCGCACCCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTc < 1:98359‑M1/100‑1 (MQ=255) | CCTGTATTTTGAGCACCTGTTTCCCGGTGAGGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTC > NC_000913/729942‑730140 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |