New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 937227NA (NA)6 (0.060) 5/162 NT NA noncoding (4/36 nt) REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 937259 NA (NA)noncoding (36/36 nt) REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 126 total aligned reads displayed.

TCGAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAG  >  NC_000913/937128‑937326
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tCGAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTAT                                                                                                     >  1:398746‑M1/1‑100 (MQ=255)
tCGAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTAT                                                                                                     <  2:3009898‑M1/100‑1 (MQ=255)
 cGAACAGATGGAAGCGCAGGGGATTGTCAGCGAAAAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACAGCCGTTTGACTAACTAATGCATCGTATg                                                                                                    >  2:634812‑M1/1‑99 (MQ=255)
   aaCAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgcc                                                                                                  >  2:2232369‑M1/1‑97 (MQ=255)
    aCAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccg                                                                                                 <  2:1913180‑M1/100‑5 (MQ=255)
    aCAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccg                                                                                                 <  2:631326‑M1/100‑5 (MQ=255)
      aGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccgga                                                                                               >  2:2535488‑M1/1‑94 (MQ=255)
       gATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccggat                                                                                              >  1:485262‑M1/1‑93 (MQ=255)
        aTGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACTACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATa                                                                                             <  1:2186737/100‑1 (MQ=255)
        aTGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATa                                                                                             <  1:1908179/100‑1 (MQ=255)
         tGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATaa                                                                                            >  2:605977/1‑100 (MQ=255)
         tGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATaa                                                                                            >  1:1906274/1‑100 (MQ=255)
          ggAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATCCATCGTATGCCGGATAAg                                                                                           >  2:2741477/1‑100 (MQ=255)
           gAAGCGGCGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAgg                                                                                          <  2:1672465/100‑1 (MQ=255)
           gAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAgg                                                                                          <  2:180451/100‑1 (MQ=255)
             aGCGCAGGGGAGTGTCAGCGAACCGGGGCGCAACGGTAATCGTGAAGTGCTGGACCCGCGGCAGTTTGACTAACTAAGGCATCGTATGCCGGATAAGgc                                                                                         <  2:246714/99‑1 (MQ=255)
              gcgcAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGgcgc                                                                                       <  2:1502965/100‑1 (MQ=255)
                gcAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCgg                                                                                     <  2:1968575/100‑1 (MQ=255)
                gcAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCgg                                                                                     <  1:746158/100‑1 (MQ=255)
                gcAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCgg                                                                                     <  1:2601066/100‑1 (MQ=255)
                 cAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGt                                                                                    <  1:825010/100‑1 (MQ=255)
                   ggggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTa                                                                                   >  2:2929207/1‑99 (MQ=255)
                   ggggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAg                                                                                  >  2:2435372/1‑100 (MQ=255)
                    gggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGc                                                                                 >  1:658856/1‑100 (MQ=255)
                     ggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTaaga                                                                                >  1:610002/1‑97 (MQ=255)
                     ggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCg                                                                                >  1:1712903/1‑100 (MQ=255)
                      gATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGt                                                                               >  2:1419053/1‑100 (MQ=255)
                         tGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGc                                                                            >  2:823737/1‑100 (MQ=255)
                          gTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCA                                                                           <  1:1203388‑M2/100‑1 (MQ=255)
                          gTCAGCGAACAGGGGCACAAAGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCA                                                                           >  2:2768785‑M2/1‑100 (MQ=255)
                            cAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATC                                                                         <  1:243514‑M2/100‑1 (MQ=255)
                            cAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATC                                                                         <  2:617931‑M2/100‑1 (MQ=255)
                             aGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCC                                                                        <  2:391047‑M2/100‑1 (MQ=255)
                              gCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccggatgcgacgctaccgcgccttatccg                                                                       <  1:1651193‑M1/100‑31 (MQ=255)
                               ggaACCGGGGCACAACGGGAATCGTGAAGTCCTGGCCCCACCGCGGGTTGACTAACTAATGCATCGTATgccggatgcgacgctaccgcgccttatccgg                                                                      <  2:2914712‑M1/99‑32 (MQ=255)
                               cGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccggatgcgacgctaccgcgccttatccgg                                                                      <  2:465788‑M1/100‑32 (MQ=255)
                               cGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGG                                                                      >  2:658855‑M2/1‑100 (MQ=255)
                                gAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccggatgcgacgctaccgcgccttatccggc                                                                     <  1:1074000‑M1/100‑33 (MQ=255)
                                gAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGC                                                                     >  1:2535513‑M2/1‑100 (MQ=255)
                                 aaCAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCa                                                                    <  2:1999934‑M2/100‑2 (MQ=255)
                                  aCAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCAc                                                                   <  2:2642662/100‑1 (MQ=255)
                                     ggggCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccggatgcgacgctaccgcgccttatccggcatacg                                                                <  2:398744‑M1/100‑38 (MQ=255)
                                     ggggCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCActct                                                                >  2:3029083/1‑100 (MQ=255)
                                     ggggCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCActct                                                                >  1:2430241/1‑100 (MQ=255)
                                      gggCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTa                                                               <  1:835885/100‑1 (MQ=255)
                                       ggCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGTATCCGGCACTCTAt                                                              >  1:2250347/1‑100 (MQ=255)
                                       ggCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTAt                                                              <  2:140547/100‑1 (MQ=255)
                                        gCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGTATCCGGCACTCTATc                                                             <  2:2250327/100‑1 (MQ=255)
                                         cacaACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCa                                                            <  1:605978/100‑1 (MQ=255)
                                           caACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGTCACTCTATCAAc                                                          >  1:1218130/1‑100 (MQ=255)
                                           caACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAAc                                                          >  1:1535022/1‑100 (MQ=255)
                                           caACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAAc                                                          <  1:758314/100‑1 (MQ=255)
                                              cGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTg                                                        >  2:2628649/1‑99 (MQ=255)
                                              cGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGa                                                       >  1:245526/1‑100 (MQ=255)
                                               ggTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGaa                                                      >  1:911328/1‑100 (MQ=255)
                                               ggTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGaa                                                      <  2:1755671/100‑1 (MQ=255)
                                                 tAATCGTGATGTACTGGCCCCACCGCCGTTTGACTAACTGATGCATTGTATGTCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTTTATCAACTGaaaa                                                    <  1:3094153/100‑1 (MQ=255)
                                                 tAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGGATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGaaaa                                                    <  2:2533437/100‑1 (MQ=255)
                                                   aTCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAAtt                                                  <  1:408690/100‑1 (MQ=255)
                                                    tCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTc                                                 <  2:2430217/100‑1 (MQ=255)
                                                     cGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCa                                                >  1:1798940/1‑100 (MQ=255)
                                                     cGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCa                                                <  1:1425229/100‑1 (MQ=255)
                                                      gTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAg                                               <  1:2028955/100‑1 (MQ=255)
                                                      gTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAg                                               <  2:168032/100‑1 (MQ=255)
                                                      gTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAg                                               <  1:2303084/100‑1 (MQ=255)
                                                      gTGAAGTGCTGGCCCCACCGCCGTCTGACTACCTAATGCATCGTATGCCGCATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAg                                               <  2:2191417/100‑1 (MQ=255)
                                                         aaGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTAt                                            <  2:1203381/100‑1 (MQ=255)
                                                             gcgggCCCCACCGCCGGTTGACTAACTAAGGCATCGTATGCCCGATAAGACGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttc                                        <  2:1987123/97‑1 (MQ=38)
                                                             gCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttc                                        >  2:929286/1‑100 (MQ=255)
                                                             gCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttc                                        >  2:2106640/1‑100 (MQ=255)
                                                               tGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttctt                                      >  2:1194153/1‑100 (MQ=255)
                                                                ggCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCatacgatgcattagttagtcaaacggcggtgg                                     <  1:781453‑M2/100‑33 (MQ=255)
                                                                ggCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttcttc                                     >  1:150779/1‑100 (MQ=255)
                                                                   cccACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCttt                                  <  2:586464/100‑1 (MQ=255)
                                                                    ccACCGCCGTTTGACTAACTAATGCATCGTATgccggatgcgacgctaccgcgccttatccggcatacgatgcattagttagtcaaacggcggtggggcc                                 <  1:781453‑M1/100‑69 (MQ=255)
                                                                     cACCGCCGTTTGACTAACTAATGCATCGTATGCGGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTcc                                <  1:2424319/100‑1 (MQ=255)
                                                                     cACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTcn                                <  2:199003/100‑2 (MQ=255)
                                                                     cACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTcc                                >  1:1649023/1‑100 (MQ=255)
                                                                     cACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTcc                                <  1:483783/100‑1 (MQ=255)
                                                                      aCCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCACATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCt                               >  1:282414/1‑100 (MQ=255)
                                                                        cgccgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCa                             >  1:2826378/1‑100 (MQ=255)
                                                                          ccgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAg                           <  1:604135/100‑1 (MQ=255)
                                                                           cgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGc                          <  2:7481/100‑1 (MQ=255)
                                                                            gTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGGAAATTCAGTATTTTCTTCTTTCCTCAAGCt                         >  2:1446227/1‑100 (MQ=255)
                                                                            gTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCt                         <  1:835456/100‑1 (MQ=255)
                                                                               tGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGat                      <  1:2053997/100‑1 (MQ=255)
                                                                               tGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGat                      <  1:2637731/100‑1 (MQ=255)
                                                                                gACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGctt                     >  2:518082/1‑100 (MQ=255)
                                                                                   taactaaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGattatt                  >  2:1156492/1‑100 (MQ=255)
                                                                                      ctaaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGc               >  2:2315333/1‑100 (MQ=255)
                                                                                        aaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCt             <  2:485260/100‑1 (MQ=255)
                                                                                         aTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTg            >  1:2182013/1‑100 (MQ=255)
                                                                                         aTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTg            >  1:1164949/1‑100 (MQ=255)
                                                                                          tGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTgg           <  2:2446523/100‑1 (MQ=255)
                                                                                             accGTATATCGAATAAGGGGAGTTAGCGTGGCATCCGGCTTTCTATCAGCTGAAAATTCAGTATTTTCTTCTTTCCCCAAGCTGATTATTAGCCTgg           <  2:2152191/95‑1 (MQ=255)
                                                                                               cGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCatacgatgcattagttagtcaaacggcggtggggccagcacttcacgattaccgttgtgcccc      <  2:398744‑M2/100‑64 (MQ=255)
                                                                                                 tATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATagag    >  1:2783388/1‑100 (MQ=255)
                                                                                                   tgccggatgcgacgctaccgcgccttatccggcatacgatgcattagttagtcaaacggcggtggggccagcacttcacgattaccgttgtgcccctgtt  <  2:1999934‑M1/100‑100 (MQ=255)
                                                                                                   tGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATagagag  >  2:2550068/1‑100 (MQ=255)
                                                                                                   tGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGAAATagagag  >  1:1386950/1‑100 (MQ=255)
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TCGAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAG  >  NC_000913/937128‑937326

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.