New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 20668320 (0.000)16 (0.160) 7/160 NT 100% noncoding (522/1195 nt) IS5 repeat region
?NC_000913 = 2066857 NA (NA)noncoding (497/1195 nt) IS5 repeat region

Only 100 of 125 total aligned reads displayed.

CATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGGCG  >  NC_000913/2066733‑2066931
                                                                                                   |                                                                                                   
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGCTCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:3094690‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  2:861760‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     <  1:904122‑M1/100‑1 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  2:10254‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     <  2:1279288‑M1/100‑1 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:1561492‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     <  2:2398510‑M1/100‑1 (MQ=255)
                                tGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgacca                                                                     <  2:1909081‑M1/100‑33 (MQ=255)
                                tGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgacca                                                                     <  1:2541223‑M1/100‑33 (MQ=255)
                                 gCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaa                                                                    <  2:1674608‑M1/100‑34 (MQ=255)
                                  ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                                   <  1:32767‑M1/100‑35 (MQ=255)
                                   cACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaaga                                                                  <  1:1800728‑M1/100‑36 (MQ=255)
                                   cACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaaga                                                                  <  2:302499‑M1/100‑36 (MQ=255)
                                   cACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaaga                                                                  <  1:2298952‑M1/100‑36 (MQ=255)
                                    aCTGATTGCCTTTCTTGGTCTGATTCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaa                                                                 <  2:3061092‑M1/100‑37 (MQ=255)
                                    aCTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaa                                                                 <  1:413837‑M1/100‑37 (MQ=255)
                                    aCTGATTGCCTTGCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTAGTCGAtgccaccatcattgaggcacccagctcgaccaagaa                                                                 <  1:1260838‑M1/100‑37 (MQ=255)
                                      tGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaaca                                                               <  1:2003077‑M1/100‑39 (MQ=255)
                                        agtgcCTTTCTTGGTCTTATGCATCTCCGGATCGCGTTGCTGCGCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaa                                                             <  2:1313979‑M1/98‑41 (MQ=255)
                                                                                           cgtggACGAtgccacgatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcggtg           <  2:2469458‑M1/97‑91 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgcggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  2:1365488‑M1/1‑9 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacgcagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtg           <  2:2416314‑M1/99‑91 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:1609420‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  2:1223732‑M1/1‑9 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  1:1957953‑M1/1‑9 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:186890‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:2897602‑M1/100‑92 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggctcccagcttgaccaagaacaaagagcagctacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:1877334‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:1587317‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:115484‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:716293‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:502588‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:386958‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         >  2:2223345‑M1/1‑8 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:1049298‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:2623602‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:189115‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:2545009‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctagaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:3030413‑M1/100‑93 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca        >  2:1137818‑M1/1‑7 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca        <  1:2759320‑M1/100‑94 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca        >  1:1152722‑M1/1‑7 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca        >  1:1183805‑M1/1‑7 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagcgcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:399438‑M1/99‑93 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagctgcatcagaccaagaaaggcaatcagtggcac       >  2:2891168‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       <  1:1097675‑M1/100‑95 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       <  2:1921475‑M1/100‑95 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  2:301478‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  1:2473398‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:2225794‑M1/98‑93 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgctccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:1025543‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      <  1:290953‑M1/100‑96 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:1562510‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:1642815‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:2412921‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:1234527‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:2536115‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:2590752‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:2702786‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:2736148‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:268232‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:620023‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:721339‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:1298715‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      <  1:2368084‑M1/100‑96 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:1253097‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:1112586‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:1077535‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaaaaaaggcaatcagtggcact      <  1:1965786‑M1/100‑96 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactt     >  2:777459‑M1/1‑4 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatccgtggcacttt    >  2:475672‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  2:1565215‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  1:601159‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  1:2573926‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  1:1505058‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  2:2386015‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    <  2:2273549‑M1/100‑98 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    <  2:2208648‑M1/100‑98 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  1:2259689‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    <  2:387824‑M1/100‑98 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  2:1679375‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  2:1423952‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaaacagtggcacttt    >  1:2541240‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcaacaagctcgaccaagaacaaagagcagcaacgcgatccggagacgcatcagaccaagaaaggcaatcagtggcactt     >  2:1080012‑M1/1‑3 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaccaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   >  2:1659464‑M1/1‑2 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:794528‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:1692632‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:171522‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:1852263‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:2139894‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:1331658‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:1092568‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcatcgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   >  1:2665134‑M1/1‑2 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaagaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttag  <  2:2195075‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:2926718‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  >  1:1662985‑M1/1‑1 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:3027711‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  >  1:1969875‑M1/1‑1 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:706111‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:1021691‑M1/100‑100 (MQ=255)
                                                                                                   |                                                                                                   
CATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGGCG  >  NC_000913/2066733‑2066931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.