New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2146653NA (NA)6 (0.060) 5/164 NT NA noncoding (54/84 nt) REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 2146683 NA (NA)noncoding (84/84 nt) REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 134 total aligned reads displayed.

GTGAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACG  >  NC_000913/2146554‑2146751
                                                                                                   |                                                                                                  
gTGAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAg                                                                                                    >  2:1339547/1‑100 (MQ=255)
 tGAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGg                                                                                                   <  2:2381406‑M1/100‑2 (MQ=255)
 tGAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGg                                                                                                   <  1:2883210‑M1/100‑2 (MQ=255)
  gAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCTATTGCCGGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgc                                                                                                  <  1:2174097‑M1/100‑3 (MQ=255)
  gAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgc                                                                                                  <  2:2862693‑M1/100‑3 (MQ=255)
     tagtatTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAAGCGCTCATTCCCCAGgccgg                                                                                               <  2:1513722‑M1/100‑6 (MQ=255)
     tagtagTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccgg                                                                                               <  2:1687863‑M1/100‑6 (MQ=255)
      agtagtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccgga                                                                                              >  2:2718535‑M1/1‑94 (MQ=255)
      agtagtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccgga                                                                                              <  2:741383‑M1/100‑7 (MQ=255)
       gtagtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggat                                                                                             >  1:569560‑M1/1‑93 (MQ=255)
       gtagtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccgga                                                                                              <  2:2808574‑M1/99‑7 (MQ=255)
        tagtTATTTCGCGATTAACTGAGGCTTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggat                                                                                             <  2:2145276‑M1/99‑8 (MQ=255)
          gtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAg                                                                                          >  2:536010/1‑100 (MQ=255)
          gtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAg                                                                                          >  1:2674009/1‑100 (MQ=255)
           ttATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGCCGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAgg                                                                                         <  1:1858203/100‑1 (MQ=255)
           ttATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAgg                                                                                         <  1:1405203/100‑1 (MQ=255)
           ttATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAgg                                                                                         <  1:248759/100‑1 (MQ=255)
            tATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAgga                                                                                        >  2:1858188/1‑99 (MQ=255)
            tATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCCACAAATCGCTCATTCCCCAGGCCGAATaa                                                                                           >  2:2322580/1‑97 (MQ=255)
             aTTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGgcg                                                                                       >  1:1269952/1‑100 (MQ=255)
                tCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTc                                                                                    >  1:2738452/1‑100 (MQ=255)
                tCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTc                                                                                    <  1:3048393/100‑1 (MQ=255)
                 cgcgATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCg                                                                                   >  2:2820879/1‑100 (MQ=255)
                  gcgATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGc                                                                                  >  2:2517899/1‑100 (MQ=255)
                     aTTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCAcc                                                                               <  2:2521143/100‑1 (MQ=255)
                        aaCTGAGGCGTGCTTCCCGATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCA                                                                            <  2:1567846‑M2/100‑1 (MQ=255)
                        aaCTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTCATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCA                                                                            >  1:2527829‑M2/1‑100 (MQ=255)
                         aCTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCAT                                                                           <  2:873415‑M2/100‑1 (MQ=255)
                          cTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATC                                                                          <  1:325786‑M2/100‑1 (MQ=255)
                            gAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCG                                                                        <  1:199285‑M2/100‑1 (MQ=255)
                              ggCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTCCAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGC                                                                      <  2:2946461‑M2/100‑1 (MQ=255)
                              ggCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggatgcggtgcgagcgccttatccggc                                                                      <  1:816336‑M1/100‑31 (MQ=255)
                              ggCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGC                                                                      <  1:2369798‑M2/100‑1 (MQ=255)
                              ggCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGC                                                                      <  2:1774243‑M2/100‑1 (MQ=255)
                              ggCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGC                                                                      >  2:2966440‑M2/1‑100 (MQ=255)
                              ggCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGC                                                                      <  2:1063774‑M2/100‑1 (MQ=255)
                               gCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCg                                                                     <  1:2796231/100‑1 (MQ=255)
                                 gTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGAc                                                                   <  1:1886649/100‑1 (MQ=255)
                                 gTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGAc                                                                   <  1:949334/100‑1 (MQ=255)
                                  tGCTTTCCCATCGCCTGATTGTACGCTAACGCGTCTTATCATGCCTATAAATCGCTCATTCCCCAGgccggatgcggtgcgagcgccttatccggcctgg                                                                  <  2:2847552‑M1/100‑35 (MQ=255)
                                  tGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGAcc                                                                  <  2:60046/100‑1 (MQ=255)
                                     ttCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAAc                                                               <  1:152865/100‑1 (MQ=255)
                                      tCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACg                                                              >  2:421360/1‑100 (MQ=255)
                                       ccccATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGt                                                             >  2:2335613/1‑100 (MQ=255)
                                       ccccATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGt                                                             >  2:179097/1‑100 (MQ=255)
                                         ccATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCa                                                           >  1:2616143/1‑100 (MQ=255)
                                           aTCGCCTGATTCGACGCTTACGCGTTTTATCATTCCTACAAATCTCTCATTCCCCACGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATg                                                         <  2:2670486/100‑1 (MQ=37)
                                           aTCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggatgcggtgcgagcgccttatccggcctggggaatgagc                                                         <  1:1052769‑M1/100‑44 (MQ=255)
                                           aTCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATg                                                         >  2:1841492/1‑100 (MQ=255)
                                            tCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATTAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGc                                                        <  1:2194439/100‑1 (MQ=255)
                                            tCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGc                                                        <  1:873418/100‑1 (MQ=255)
                                                   aTGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCt                                                 <  1:1302662/100‑1 (MQ=255)
                                                    tGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTg                                                <  1:1269992/100‑1 (MQ=255)
                                                     gCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTgg                                               <  1:490892/100‑1 (MQ=255)
                                                     gCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTgg                                               >  2:3095492/1‑100 (MQ=255)
                                                     gCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTgg                                               >  2:2621653/1‑100 (MQ=255)
                                                       gACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGtt                                             <  1:2584057/100‑1 (MQ=255)
                                                        aCGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggatgcggtgcgagcgccttatccggcctggggaatgagcgatttgtaggcat                                            <  1:1697672‑M1/100‑57 (MQ=255)
                                                         cGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGc                                           >  1:218544/1‑100 (MQ=255)
                                                          gCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGcc                                          <  2:2703484/100‑1 (MQ=255)
                                                          gCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGcc                                          >  1:3060813/1‑100 (MQ=255)
                                                          gCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTCGTTGc                                           >  2:1197104/1‑99 (MQ=255)
                                                           cTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCa                                         <  1:1129817/100‑1 (MQ=255)
                                                            tAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAg                                        <  2:1764634/100‑1 (MQ=255)
                                                             aaCGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGc                                       >  1:1027779/1‑100 (MQ=255)
                                                                 cgTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTc                                   <  2:1087790/100‑1 (MQ=255)
                                                                   tCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCg                                 <  1:3095521/100‑1 (MQ=255)
                                                                   tCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCg                                 >  1:1141633/1‑100 (MQ=255)
                                                                    cTTATCATGCCTACAACTCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATTCTTTGTTTGGTTGCCAGCCTTCCg                                 <  2:251358/99‑1 (MQ=38)
                                                                      tATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGtat                              >  1:333900/1‑100 (MQ=255)
                                                                      tATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGtat                              <  1:706931/100‑1 (MQ=255)
                                                                       aTCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGtata                             <  1:788263/100‑1 (MQ=255)
                                                                         cATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATAcc                           >  2:2640312/1‑100 (MQ=255)
                                                                         cATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATAcc                           <  1:2607376/100‑1 (MQ=255)
                                                                         cATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATAcc                           <  1:485635/100‑1 (MQ=255)
                                                                         cATGCCTACAAATCGCTCATCCCCCAGGCCGGATAAGGAGATAGCACCACATCCGGCGACCATAATAATGCTTCGGCAGGTAGCCAGCCTTCCGTATAc                            >  2:1927075/1‑99 (MQ=255)
                                                                          aTGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgt                          <  1:1697672‑M2/100‑45 (MQ=255)
                                                                           tGCCTACAAATCGCTCATTCCCCAGGCCGCATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAg                         <  2:483810/100‑1 (MQ=255)
                                                                             ccTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGat                       >  1:210141/1‑100 (MQ=255)
                                                                             ccTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGat                       <  2:1740807/100‑1 (MQ=255)
                                                                              cTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGata                      >  2:1465133/1‑100 (MQ=255)
                                                                               tACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGatat                     >  1:1959318/1‑100 (MQ=255)
                                                                                aCAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATg                    <  2:1937828/100‑1 (MQ=255)
                                                                                 cAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGc                   >  2:1836110/1‑100 (MQ=255)
                                                                                 cAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGc                   >  1:1736801/1‑100 (MQ=255)
                                                                                  aaaTCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCa                  <  1:1113410/100‑1 (MQ=255)
                                                                                     tCGCTCATTGCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGATGCCAGCCTTCCGTATACCAGATATGCAAc                <  2:2039159/99‑1 (MQ=255)
                                                                                       gCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgat             <  1:1052769‑M2/100‑58 (MQ=255)
                                                                                       gCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAgc             >  2:210145/1‑100 (MQ=255)
                                                                                       gCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAgc             >  2:401243/1‑100 (MQ=255)
                                                                                           aTTCCCCAGgccggatgcggtgcgagcgccttagccggcctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggg          <  1:2771356‑M1/99‑91 (MQ=255)
                                                                                             tCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATaa       >  1:1522694/1‑100 (MQ=255)
                                                                                               cccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGa     >  1:2900382/1‑100 (MQ=255)
                                                                                                ccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgctggggaagca    <  2:2051813‑M2/100‑67 (MQ=255)
                                                                                                ccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttataggcatgataagacgcgttagcgtacaatcaggcgatgggaaagca    <  2:2847552‑M2/100‑67 (MQ=255)
                                                                                                ccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGaa    <  1:424827/100‑1 (MQ=255)
                                                                                                 cAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAAc   <  1:1841507/100‑1 (MQ=255)
                                                                                                 cAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAAc   <  1:717498/100‑1 (MQ=255)
                                                                                                  aGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACg  <  1:378056/100‑1 (MQ=255)
                                                                                                  aGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACg  <  1:922267/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
GTGAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACG  >  NC_000913/2146554‑2146751

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.