New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2798052 =NA (NA)7 (0.070) 5/174 NT NA intergenic (+8/+39) ygaP/stpA DUF2892 family inner membrane rhodanese/DNA binding protein, nucleoid‑associated
?NC_000913 2798084 = NA (NA)intergenic (+40/+7) ygaP/stpA DUF2892 family inner membrane rhodanese/DNA binding protein, nucleoid‑associated

Only 100 of 125 total aligned reads displayed.

TTGTTGGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGT  >  NC_000913/2797953‑2798151
                                                                                                   |                                                                                                   
ttgttgGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGAc                                                                                                     <  2:3066369/100‑1 (MQ=255)
ttgttgGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGAc                                                                                                     <  2:780193/100‑1 (MQ=255)
   ttgGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGcc                                                                                                  <  1:1302473/100‑1 (MQ=255)
    tgGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCg                                                                                                 <  2:1558030/100‑1 (MQ=255)
     ggTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCgg                                                                                                >  2:2263894/1‑100 (MQ=255)
     ggTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCgg                                                                                                >  2:790032/1‑100 (MQ=255)
      gTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGa                                                                                               <  2:1069307/100‑1 (MQ=255)
       tGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGAc                                                                                              >  1:25991/1‑100 (MQ=255)
         ccGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGAcgc                                                                                            >  2:2260694/1‑100 (MQ=255)
           gggTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACgcgc                                                                                          >  1:1161838/1‑100 (MQ=255)
           gggTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTCAGAAGCGACGCCGGACgcgc                                                                                          <  2:1908910/100‑1 (MQ=255)
            ggTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGcc                                                                                         >  2:787817/1‑100 (MQ=255)
            ggTGACTTTTTGCAGGAATCAGCGGTTTTTTTTGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGcc                                                                                         <  1:2713993/100‑1 (MQ=255)
              ttACTGTTTGCTGGAATCAGCGGTTTTTGTCGAATGACAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCt                                                                                       <  2:2100125/100‑1 (MQ=255)
                 cTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagc                                                                                    <  2:3106444/100‑1 (MQ=255)
                   gTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagcag                                                                                  >  2:2692301/1‑100 (MQ=255)
                   gTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagcag                                                                                  >  1:203725/1‑100 (MQ=255)
                   gTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagcag                                                                                  >  1:70830/1‑100 (MQ=255)
                   gTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagcag                                                                                  >  1:1954941/1‑100 (MQ=255)
                    tttGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagcagc                                                                                 <  1:1702030/100‑1 (MQ=255)
                     ttGCAGGAATCAGCGGTTTTTGTTGAATGGCAAGGTTGTTAGATAATATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCg                                                                                <  2:2212037/100‑1 (MQ=255)
                      tGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAAAGAGATTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGa                                                                               >  1:2088385/1‑100 (MQ=255)
                       gCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGAc                                                                              >  2:1297230/1‑100 (MQ=255)
                        cAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGGTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGAc                                                                              >  2:1941111/1‑99 (MQ=255)
                           gAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATcc                                                                          >  1:2716640/1‑100 (MQ=255)
                           gAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATcc                                                                          >  2:131685/1‑100 (MQ=255)
                            tacaccgaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgaGGCCGGACGCGCCCTAGCAGCGACATCCg                                                                         >  1:501103‑M1/72‑100 (MQ=255)
                             acaccgaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgaCGCCGGACGCGCCCTAGCAGCGACATCCgg                                                                        >  2:453336‑M1/71‑100 (MQ=255)
                               cAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGCTGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGcc                                                                      <  1:1695599/100‑1 (MQ=255)
                               accgaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgaGGCCGGACGCGCCCTAGCAGCGACATCCGGcc                                                                      >  1:1449749‑M1/69‑100 (MQ=255)
                                aGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCt                                                                     >  1:102759/1‑100 (MQ=255)
                                aGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCt                                                                     >  1:723052/1‑100 (MQ=255)
                                aGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCt                                                                     <  2:361362/100‑1 (MQ=255)
                                 gCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGc                                                                       >  2:1817097/1‑97 (MQ=255)
                                 gCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTc                                                                    <  1:2454270/100‑1 (MQ=255)
                                 gCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTc                                                                    >  2:1914379/1‑100 (MQ=255)
                                 cgaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgaCGCCGGACGCGCCCTAGCAGCGACATCCGGCCTc                                                                    >  2:713322‑M1/67‑100 (MQ=255)
                                  cGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCa                                                                   >  1:2896414/1‑100 (MQ=255)
                                   ggTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAg                                                                  <  1:1187624/100‑1 (MQ=255)
                                   ggTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAg                                                                  <  2:1605486/100‑1 (MQ=255)
                                   aagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgaCGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAg                                                                  >  1:848944‑M1/65‑100 (MQ=255)
                                     tttttGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTa                                                                >  1:2484336/1‑100 (MQ=255)
                                         tgtgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTa                                                            <  1:1227054/100‑1 (MQ=255)
                                          gtgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACGTCCGCCCTCaccgcctag                                                           >  2:3097805/1‑92 (MQ=255)
                                          gtgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAg                                                           <  2:2696053/100‑1 (MQ=255)
                                          gtgGAATGGCAAGGTTGTTAGATAAGATGCCGTGAAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAg                                                           <  2:2540951/100‑1 (MQ=255)
                                             gAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATc                                                        <  2:1094840/100‑1 (MQ=255)
                                             gAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATc                                                        <  2:1160604/100‑1 (MQ=255)
                                              aaTGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCa                                                       <  2:280544/100‑1 (MQ=255)
                                               aTGGCAAGGTTGTGAGATAAGATGTCGTGGAACCAACGAGCTTGATCAGCGACGCCGTACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGAt                                                         <  2:159246/97‑1 (MQ=255)
                                                tGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAgg                                                     <  1:530011/100‑1 (MQ=255)
                                                 ggCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGa                                                    <  1:222686/100‑1 (MQ=255)
                                                  gCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGaa                                                   >  2:1102147/1‑100 (MQ=255)
                                                   cAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGaaa                                                  >  2:2420173/1‑100 (MQ=255)
                                                     aGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtc                                                <  2:2716612/100‑1 (MQ=255)
                                                      ggTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcg                                               >  1:913807/1‑100 (MQ=255)
                                                       gttgttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGGCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgt                                              >  2:414964/1‑100 (MQ=255)
                                                       gttgttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgt                                              >  2:690159/1‑100 (MQ=255)
                                                        ttgttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgtc                                             <  1:608560/100‑1 (MQ=255)
                                                         tgttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgtcg                                            <  1:2843332/100‑1 (MQ=255)
                                                          gttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCga                                           <  2:2583898/100‑1 (MQ=255)
                                                          gttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCga                                           >  1:3050005/1‑100 (MQ=255)
                                                            tAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgaga                                         <  2:414477/100‑1 (MQ=255)
                                                              gATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgagaga                                       >  2:1168339/1‑100 (MQ=255)
                                                              gATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgagaga                                       >  2:3063085/1‑100 (MQ=255)
                                                               aTAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCGGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAGCGTCgagaga                                       >  2:1430768/1‑99 (MQ=255)
                                                               aTAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGAt                                      >  2:2896956/1‑100 (MQ=255)
                                                                tAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGAtt                                     <  2:1954924/100‑1 (MQ=255)
                                                                tAAGAGGCCGTGGAACCAACGAGCGTGAGAAGCGGCGACGTAGGCGCCCTAGAAGCGACATGCGGCATCAGTAATTAGATCAGGAAATCGTCGAGAGAtt                                     <  2:810640/100‑1 (MQ=255)
                                                                   gATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTAc                                  >  1:2401165/1‑100 (MQ=255)
                                                                    aTGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTAcc                                 >  1:2163974/1‑100 (MQ=255)
                                                                       ccGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTACTTAGATCAGGAAATCGTCGAGAGATTTACCTTc                              >  2:2646846/1‑100 (MQ=255)
                                                                       ccGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTc                              >  1:2356272/1‑100 (MQ=255)
                                                                        cGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCt                             >  2:2844734/1‑100 (MQ=255)
                                                                         gTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTg                            >  1:35777/1‑100 (MQ=255)
                                                                         gTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTg                            >  1:118023/1‑100 (MQ=255)
                                                                         gTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTg                            >  2:2795480/1‑100 (MQ=255)
                                                                           ggACCCAACGAGCATAAGAACCTACGTCCGGCGCGCCCTACCAGCGACACCCGGTCTCTGTAATTAGATCAGTAAATCGTCTAGAGATTTACCTTCTg                            <  2:550725/98‑1 (MQ=255)
                                                                           ggAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGcc                          <  1:602947/100‑1 (MQ=255)
                                                                           ggAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGcc                          <  2:707212/100‑1 (MQ=255)
                                                                               ccAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCATCTGCCAgcg                      >  2:2035284/1‑100 (MQ=255)
                                                                                cAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAgcgc                     >  1:314838/1‑100 (MQ=255)
                                                                                cAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAgcgc                     >  1:1470779/1‑100 (MQ=255)
                                                                                cAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCCCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAgcgc                     >  1:607269/1‑100 (MQ=255)
                                                                                 aaCGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAgcgc                     >  2:2396039/1‑99 (MQ=255)
                                                                                 aaCGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGcc                    >  2:1250001/1‑100 (MQ=255)
                                                                                 aaCGAGCTTGAGAAGCGACGCCGGACGAGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAg                        <  2:1855804/96‑1 (MQ=255)
                                                                                     aGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAg                >  1:1502661/1‑100 (MQ=255)
                                                                                     aGCGTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCATCAGTAATTAGATCAGGAAATCGGCGAGAGATTTACCTTCTGCCAGCGCCTGa                 <  1:923345/99‑1 (MQ=255)
                                                                                      gCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAgn               <  1:952469/100‑2 (MQ=255)
                                                                                      gCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGc               <  1:2196486/100‑1 (MQ=255)
                                                                                         tGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAAt            >  1:2373283/1‑100 (MQ=255)
                                                                                           agaAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTg          >  1:1977912/1‑100 (MQ=255)
                                                                                            gaAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTgg         >  1:1353556/1‑100 (MQ=255)
                                                                                             aaGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGc        <  1:226889/100‑1 (MQ=255)
                                                                                                cGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTc     >  1:678627/1‑100 (MQ=255)
                                                                                                  aCGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCgg   <  1:741477‑M1/99‑1 (MQ=255)
                                                                                                   cGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTCCCTTCTGCCAGCGCCTGAGCAATTGGCTTCgg   >  1:1461582/1‑99 (MQ=255)
                                                                                                   cGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGgt  <  1:1017913/100‑1 (MQ=255)
                                                                                                   cGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGgt  <  2:2163955/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TTGTTGGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGT  >  NC_000913/2797953‑2798151

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.