New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2950598 =NA (NA)14 (0.140) 6/158 NT NA intergenic (+25/+37) argA/recD amino acid N‑acetyltransferase and inactive acetylglutamate kinase/exonuclease V (RecBCD complex), alpha chain
?NC_000913 2950615 = NA (NA)noncoding (3/14 nt) REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 147 total aligned reads displayed.

TTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGC  >  NC_000913/2950499‑2950697
                                                                                                   |                                                                                                   
   cTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGc                                                                                                  <  1:391530/100‑1 (MQ=255)
   cTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCCGATGCGACATGc                                                                                                  <  1:2049611/100‑1 (MQ=255)
    tGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCg                                                                                                 <  2:2837620/100‑1 (MQ=255)
     gCCCGAGAGCAAAAAGCAGTTGTACAACTACCGGCGTAAATCCAAAGTGTTGATGGAGGATTTAGGGTAAGCGATGAAAATCGTAGGATGCGACATGAGt                                                                                                >  2:80832/1‑100 (MQ=255)
     gCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGt                                                                                                >  1:85220/1‑100 (MQ=255)
     gCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGt                                                                                                >  2:2167506/1‑100 (MQ=255)
     gCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGt                                                                                                <  1:2243002/100‑1 (MQ=255)
     gCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGt                                                                                                <  1:2427022/100‑1 (MQ=255)
     gCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGt                                                                                                >  2:271335/1‑100 (MQ=255)
      cccGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTa                                                                                               <  1:2512563/100‑1 (MQ=255)
      cccGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTa                                                                                               <  2:85218/100‑1 (MQ=255)
             gCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCg                                                                                        >  1:2429828/1‑100 (MQ=255)
              cAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGt                                                                                       >  2:1305331/1‑100 (MQ=255)
              cAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGt                                                                                       >  1:732288/1‑100 (MQ=255)
               ggcaatcgccactcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTa                                                                                      <  1:1403854‑M1/16‑1 (MQ=255)
               aaaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTa                                                                                      >  2:2294087/1‑100 (MQ=255)
               aaaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTa                                                                                      >  1:906615/1‑100 (MQ=255)
               aaaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTa                                                                                      <  1:3000301/100‑1 (MQ=255)
               aaaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTa                                                                                      <  1:1317210/100‑1 (MQ=255)
                aaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTAc                                                                                     >  1:1266073/1‑100 (MQ=255)
                      aGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCa                                                                               <  2:1357393/100‑1 (MQ=255)
                        cactcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaatcgtcggatgcgacATGCGTAACACTCGTACGTCGCATc                                                                             >  2:1083941‑M1/76‑100 (MQ=255)
                         actcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATcc                                                                            >  1:1912364‑M1/75‑100 (MQ=255)
                          gTACAGCTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCg                                                                           <  1:1114425/100‑1 (MQ=255)
                          gTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCg                                                                           <  1:1702636/100‑1 (MQ=255)
                           tcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATCCgg                                                                          >  1:2581402‑M1/73‑100 (MQ=255)
                           tACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCgg                                                                          <  2:1154324/100‑1 (MQ=255)
                            cgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATCCGGc                                                                         >  1:302458‑M1/72‑100 (MQ=255)
                            cgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATCCGGc                                                                         >  1:1533319‑M1/72‑100 (MQ=255)
                            aCAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGc                                                                         <  1:1301289/100‑1 (MQ=255)
                             gtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATCCGGCa                                                                        >  1:2839387‑M1/71‑100 (MQ=255)
                             cAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCa                                                                        >  2:797426/1‑100 (MQ=255)
                              aaCTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCaa                                                                       >  1:859002/1‑100 (MQ=255)
                                cTACCGGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAAt                                                                      <  1:2806557/99‑1 (MQ=255)
                                cTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAAtt                                                                     >  1:1126598/1‑100 (MQ=255)
                                 tgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTa                                                                    >  2:1403844‑M1/67‑100 (MQ=255)
                                 tACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTa                                                                    >  1:2574031/1‑100 (MQ=255)
                                  aCCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTAc                                                                   <  1:1251957/100‑1 (MQ=255)
                                   ccAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTAcn                                                                  <  2:1006040/100‑2 (MQ=255)
                                   ccAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACg                                                                  <  1:762838/100‑1 (MQ=255)
                                    gcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaatcgtcggatgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGt                                                                 >  1:1385581‑M1/64‑100 (MQ=255)
                                    gcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaatcgtcggatgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGt                                                                 >  2:2710557‑M1/64‑100 (MQ=255)
                                    cAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAACTCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACg                                                                  >  2:41200/1‑99 (MQ=255)
                                    cAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGt                                                                 >  1:707601/1‑100 (MQ=255)
                                     aGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGtt                                                                <  2:2550683/100‑1 (MQ=255)
                                     aGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGtt                                                                <  1:1030634/100‑1 (MQ=255)
                                     aGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGtt                                                                >  2:1650682/1‑100 (MQ=255)
                                      gCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGttt                                                               >  1:206583/1‑100 (MQ=255)
                                       cGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTa                                                              >  2:1903839/1‑100 (MQ=255)
                                       cGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTa                                                              <  1:803999/100‑1 (MQ=255)
                                        gTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTa                                                              >  2:443736/1‑99 (MQ=255)
                                           aaTCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTcc                                                          <  1:271337/100‑1 (MQ=255)
                                           aaTCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTcc                                                          <  1:2408239/100‑1 (MQ=255)
                                           aaTCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTcc                                                          <  1:1903854/100‑1 (MQ=255)
                                            aTCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTccc                                                         >  1:2713634/1‑100 (MQ=255)
                                            aTCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTccc                                                         >  1:1266369/1‑100 (MQ=255)
                                              caaaaGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCg                                                        >  1:2102815/3‑99 (MQ=255)
                                               cAAAGTGTTGATGGCGGATTTNGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTg                                                      >  1:2423797/1‑100 (MQ=255)
                                               cAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTg                                                      <  1:91602/100‑1 (MQ=255)
                                               cAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTg                                                      <  1:2294108/100‑1 (MQ=255)
                                                 aaGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGaa                                                    >  1:1916742/1‑100 (MQ=255)
                                                   gtgtTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGAGGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACt                                                  <  2:1990069/100‑1 (MQ=255)
                                                     gtTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTaa                                                >  1:2397067/1‑100 (MQ=255)
                                                       tGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaac                                              <  2:1499228/100‑1 (MQ=255)
                                                       tGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaac                                              <  2:1224070/100‑1 (MQ=255)
                                                       tGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaac                                              >  2:1341053/1‑100 (MQ=255)
                                                        gATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGGGACAAGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaaca                                             >  2:2988173/1‑100 (MQ=255)
                                                         aTGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaacaa                                            <  2:880349/100‑1 (MQ=255)
                                                         aTGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaacaa                                            >  2:2892757/1‑100 (MQ=255)
                                                          tGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaacaac                                           >  2:1308874/1‑100 (MQ=255)
                                                           ggCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcg                                          <  2:2659067/100‑1 (MQ=255)
                                                           ggCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcg                                          >  2:339667/1‑100 (MQ=255)
                                                           ggCGGATATAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcg                                          >  1:1634227/1‑100 (MQ=255)
                                                            gCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgc                                         <  1:2177193/100‑1 (MQ=255)
                                                            gCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgc                                         >  2:485832/1‑100 (MQ=255)
                                                            gCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgc                                         >  1:1499533/1‑100 (MQ=255)
                                                                aTTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACgccgcc                                     >  1:102190/1‑100 (MQ=255)
                                                                     gggTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGAcc                                <  1:2980687/100‑1 (MQ=255)
                                                                      ggTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCa                               >  1:1626388/1‑100 (MQ=255)
                                                                       gTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCAc                              >  2:1100664/1‑100 (MQ=255)
                                                                         aaGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTg                            >  1:600724/1‑100 (MQ=255)
                                                                           gCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTgcg                          >  2:988404/1‑100 (MQ=255)
                                                                           gCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTgcg                          >  1:1164538/1‑100 (MQ=255)
                                                                             gATGAAAATCGTCGGCTGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGcgcc                        >  1:1820105/1‑100 (MQ=255)
                                                                             gATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGcgcc                        >  2:1087693/1‑100 (MQ=255)
                                                                             gATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGcgcc                        >  2:762863/1‑100 (MQ=255)
                                                                             gATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGcgcc                        >  1:658737/1‑100 (MQ=255)
                                                                               tGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGTCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGcgccgc                      >  1:2488296/1‑100 (MQ=255)
                                                                               tGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGcgccgc                      >  2:1986497/1‑100 (MQ=255)
                                                                                gAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCt                     >  1:554436/1‑100 (MQ=255)
                                                                                 aaaaTCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTACTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTc                    <  2:1703961/100‑1 (MQ=255)
                                                                                   aaTCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAg                  <  1:3034997/100‑1 (MQ=255)
                                                                                      cgacgGATGCGACATGCGTAACACTAGTACGTCGCATCCGGCAATTACGTGTATTCCCGTGAACTAAACAACGCCGCTAGACCACTGCGCCGCTCAg                  <  2:3043457/94‑1 (MQ=255)
                                                                                       gtcgGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAGCAACGCCGCCAGACCACTGCGCCGCTCAGTACg              <  2:1862089/100‑1 (MQ=255)
                                                                                          ggatgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGt           <  1:102173‑M1/91‑1 (MQ=255)
                                                                                          ggatgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGt           <  1:1478856‑M1/91‑1 (MQ=255)
                                                                                             tgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGc        >  1:35177‑M1/7‑100 (MQ=255)
                                                                                                gacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGa      <  1:875211‑M1/96‑1 (MQ=255)
                                                                                                  cATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTg   >  2:2598484‑M1/2‑100 (MQ=255)
                                                                                                   aTGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGc  <  1:1701506/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGC  >  NC_000913/2950499‑2950697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.