New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3216644NA (NA)5 (0.050) 5/164 NT NA noncoding (44/78 nt) REP228 (repetitive extragenic palindromic) element; contains 2 REP sequences REP228 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 3216674 NA (NA)noncoding (74/78 nt) REP228 (repetitive extragenic palindromic) element; contains 2 REP sequences REP228 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 121 total aligned reads displayed.

TAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCAAGAACGCTCATATCAGATATA  >  NC_000913/3216546‑3216742
                                                                                                  |                                                                                                  
tAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCATGCATCATTACTCAACg                                                                                                   >  2:1818189‑M1/1‑99 (MQ=255)
    gATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACgccgg                                                                                               <  2:2442461‑M1/100‑6 (MQ=255)
     aTTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACgccgga                                                                                              >  1:686937‑M1/1‑94 (MQ=255)
       tGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATg                                                                                            >  2:2554175/1‑100 (MQ=255)
           aaTCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATgcgg                                                                                         >  1:1918106/1‑99 (MQ=255)
            aTCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATgcggcg                                                                                       >  2:2583635/1‑100 (MQ=255)
             tCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCATGCATCATTACTCAACGCCGGATgcggcg                                                                                       <  2:1686092/99‑1 (MQ=255)
              cATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTg                                                                                     <  1:3063890/100‑1 (MQ=255)
               aTGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTg                                                                                     >  2:877760/1‑99 (MQ=255)
               aTGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGa                                                                                    <  2:2221594/100‑1 (MQ=255)
                tGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGaa                                                                                   <  1:940729/100‑1 (MQ=255)
                tGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCCGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACgccggataaggcgttca                                                                                   <  1:1014416‑M1/100‑18 (MQ=255)
                tGATAAATGCAAGCGATTTGTAGAACGGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGaa                                                                                   >  1:1898315/1‑100 (MQ=255)
                ngATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGaa                                                                                   >  1:2566696/2‑100 (MQ=255)
                 gATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAAc                                                                                  <  1:2992172/100‑1 (MQ=255)
                 gATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAAc                                                                                  >  1:2370944/1‑100 (MQ=255)
                  aTAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACg                                                                                 <  2:40626/100‑1 (MQ=255)
                  aTAAAGGCAAGCGATTTGTCGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCTACTCCGGATGGGGCGTCAACg                                                                                 <  2:2057505/100‑1 (MQ=255)
                    aaaTGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAAAAGCATATACTAAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGcc                                                                               <  2:2983973/100‑1 (MQ=255)
                     aaTGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCt                                                                              <  1:2458058/100‑1 (MQ=255)
                     aaTGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCt                                                                              <  1:2192708/100‑1 (MQ=255)
                        gCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTAT                                                                           >  1:2223406‑M2/1‑100 (MQ=255)
                        gCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTAT                                                                           >  2:1797569‑M2/1‑100 (MQ=255)
                         cAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATC                                                                          <  2:1587971‑M2/100‑1 (MQ=255)
                           aGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCG                                                                        <  2:1061573‑M2/100‑1 (MQ=255)
                            gCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGG                                                                       >  1:3080519‑M2/1‑100 (MQ=255)
                             cGATTTGTAGAACTGATATGTCTATAGTCTGATAAGGCGAACCGCCTCTTCTCAGGCATCATTACTCAGCGCCGGATGCGGCGTGAACGCCTTATCCGGC                                                                      >  2:1430648‑M2/1‑100 (MQ=255)
                              gATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGcc                                                                     >  2:1266893/1‑100 (MQ=255)
                               aTTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCt                                                                    <  1:114133/100‑1 (MQ=255)
                                tttGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                   <  1:401384/100‑1 (MQ=255)
                                tttGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                   <  1:400248/100‑1 (MQ=255)
                                 ttGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACgccggataaggcgttcacgccgcatccggcgttg                                                                  <  1:1935‑M1/100‑35 (MQ=255)
                                    tAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACgtg                                                               <  1:184876/100‑1 (MQ=255)
                                      gAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGtgtg                                                             >  2:1969204/1‑100 (MQ=255)
                                       aaCTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGtgtgn                                                            <  1:687125/100‑2 (MQ=255)
                                       aaCTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTga                                                            <  2:543736/100‑1 (MQ=255)
                                        aCTGATATGTCTATCATCTAATAAGACGAACCGCCTCTTATCAGGCACCATTACTCAACGCCGGATGCTGCGTACACGCCTTATc                                                                          >  2:2632719/1‑85 (MQ=255)
                                          tGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGAt                                                         >  1:1704531/1‑100 (MQ=255)
                                          tGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGAt                                                         <  1:3058947/100‑1 (MQ=255)
                                          tGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGAt                                                         <  1:1083607/100‑1 (MQ=255)
                                          tGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCGACGTGTGAGAt                                                         >  1:71647/1‑100 (MQ=255)
                                           gATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATg                                                        <  1:2583660/100‑1 (MQ=255)
                                            atatGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATg                                                        <  2:752232/99‑1 (MQ=255)
                                              atGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGt                                                     <  2:142524/100‑1 (MQ=255)
                                                gTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTcc                                                   >  2:3038363/1‑100 (MQ=255)
                                                  cTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCAc                                                 >  2:2246398/1‑100 (MQ=255)
                                                     taGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGtt                                              >  1:3109866/1‑100 (MQ=255)
                                                     taGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGtt                                              >  2:1425205/1‑100 (MQ=255)
                                                      aGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACgccggatgcggcgtgaacgccttatccggcgttgagtaatgatgcctgagaaga                                              >  1:1032069‑M1/1‑45 (MQ=255)
                                                       gTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTa                                            >  1:2155330/1‑100 (MQ=255)
                                                       gTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTa                                            >  1:998862/1‑100 (MQ=255)
                                                       gTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTa                                            <  1:2246418/100‑1 (MQ=255)
                                                         cTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTaaa                                          <  2:1471736/100‑1 (MQ=255)
                                                          tGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTaaaa                                         <  1:2182660/100‑1 (MQ=255)
                                                          tGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTaaaa                                         >  1:1756207/1‑100 (MQ=255)
                                                          tGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTaaaa                                         >  2:41840/1‑100 (MQ=255)
                                                          tGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTaaaa                                         >  1:246501/1‑100 (MQ=255)
                                                           gATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTaaaaa                                        >  1:1873821/1‑100 (MQ=255)
                                                            aTAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAAt                                       >  1:2447182/1‑100 (MQ=255)
                                                            aTAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAAt                                       <  2:686935/100‑1 (MQ=255)
                                                             tAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATc                                      <  2:1210123/100‑1 (MQ=255)
                                                               aGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCAt                                    >  1:2993832/1‑100 (MQ=255)
                                                                 aCGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCAttt                                  <  1:2995827/100‑1 (MQ=255)
                                                                 aCGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCAttt                                  <  1:659231/100‑1 (MQ=255)
                                                                  cGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCAtttt                                 <  2:1536174/100‑1 (MQ=255)
                                                                  cGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCAtttt                                 >  1:1542251/1‑100 (MQ=255)
                                                                    aaCCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTa                               >  2:2877349/1‑100 (MQ=255)
                                                                    aaCCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTa                               >  1:516759/1‑100 (MQ=255)
                                                                    aaCCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTa                               >  1:1323394/1‑100 (MQ=255)
                                                                    aaCCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTa                               <  2:2370922/100‑1 (MQ=255)
                                                                     aCCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTac                              <  2:1756192/100‑1 (MQ=255)
                                                                      ccGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGATTCCACGTTTAAAAATCATTTTTaca                             >  1:79057/1‑100 (MQ=255)
                                                                      ccGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTaca                             >  1:88953/1‑100 (MQ=255)
                                                                       cGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTacac                            <  2:2679492/100‑1 (MQ=255)
                                                                        gCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACt                           >  2:291123/1‑100 (MQ=255)
                                                                          ctctTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTg                         >  1:2701088/1‑100 (MQ=255)
                                                                           tcttctCAGGCATCATTACTCAACGCCGGATAAGGCGTTCACGCCGCATCCGGCgttgagtaatgatgcctgagaagaggcggttcgtcttatcagact                         >  1:1032069‑M2/1‑54 (MQ=255)
                                                                            cttctCAGGCATCATTACTCAACGCGGGATGCGGCGTGAACGCCTTATCCGGCATACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTg                         <  2:3004428/98‑1 (MQ=255)
                                                                            cttctCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCa                       <  1:1578692/100‑1 (MQ=255)
                                                                             ttctCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCaa                      <  1:687003/100‑1 (MQ=255)
                                                                             ttctCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCaa                      >  2:3079145/1‑100 (MQ=255)
                                                                               ctcATGCAGCATGACTCAACGCCAGAGGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCAAAGTTTAAAAATAGTTTTTACACTTGCAAGa                    >  2:2127465/1‑100 (MQ=25)
                                                                               ctcAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCAAGa                    >  2:1137778/1‑100 (MQ=255)
                                                                               ctcAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCAAGa                    <  1:1925403/100‑1 (MQ=255)
                                                                                tcAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCAAGaa                   >  1:2877873/1‑100 (MQ=255)
                                                                                   ggCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCAAGAACGc                >  1:1651260/1‑100 (MQ=255)
                                                                                     catcatTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCAAGAACGCTc              >  2:1868798/1‑100 (MQ=255)
                                                                                      atcatTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCAAGAACGCTCa             <  1:1329120/100‑1 (MQ=255)
                                                                                        catTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCAAGAACGCTCata           >  1:2145751/1‑100 (MQ=255)
                                                                                          ttACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCAAGAACGCTCATATc         <  2:1304594/100‑1 (MQ=255)
                                                                                           tACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCAAGAACGCTCATATCa        >  2:1645941/1‑100 (MQ=255)
                                                                                           tACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCAAGAACGCTCATATCa        <  2:338520/100‑1 (MQ=255)
                                                                                            aCTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTTCAAGAACGCTCATATCAg       >  2:105605/1‑100 (MQ=255)
                                                                                            aCTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCAAGAACGCTCATATCAg       <  1:452619/100‑1 (MQ=255)
                                                                                             cTCAACGCCGGATGCGGCGTGAACGCTTTATCCGGGTTACGTGTGAGATGAGTCCACGTTTAATAATCTGTTTTACACTTGCAAGAACGTTCATATCAGa      <  2:2967596/100‑1 (MQ=37)
                                                                                               cAACGCCGGATGCGGCGTGAACGCCTTATCCGGCgttgagtaatgatgcctgagaagaggcggttcgtcttatcagactatagacatatcagttctacaa    <  1:1935‑M2/100‑67 (MQ=255)
                                                                                               cAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCAAGAACGCTCATATCAGata    >  1:1782161/1‑100 (MQ=255)
                                                                                               cAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCAAGAACGCTCATATCAGata    >  2:230412/1‑100 (MQ=255)
                                                                                                 aCGCCGGATGCGGCGTGAACGCCTTATCCGGCgttgagtaatgatgcctgagaagaggcggttagtcttatcagactatagacatatcagttctacaaat  <  1:2187136‑M2/100‑69 (MQ=255)
                                                                                                 aCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCAAGAACGCTCATATCAGAtata  >  1:2144537/1‑100 (MQ=255)
                                                                                                  |                                                                                                  
TAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCAAGAACGCTCATATCAGATATA  >  NC_000913/3216546‑3216742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.