New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3650792NA (NA)9 (0.090) 6/166 NT NA noncoding (81/100 nt) RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 3650805 NA (NA)noncoding (94/100 nt) RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 128 total aligned reads displayed.

TTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGTTATCAGCGATAC  >  NC_000913/3650708‑3650903
                                                                                                 |                                                                                                  
ttATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtc                                                                                                  >  1:413029‑M2/1‑98 (MQ=255)
  aTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtcag                                                                                                >  1:2411688‑M2/1‑96 (MQ=255)
  aTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtcag                                                                                                >  2:1271003‑M2/1‑96 (MQ=255)
    gTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtcaggc                                                                                              >  1:467354‑M2/1‑94 (MQ=255)
    gTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtcaggc                                                                                              >  2:2508752‑M2/1‑94 (MQ=255)
    gTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGGATGTTATTTGTAGGCCTGACAGGCTTAGCGCAtcaggc                                                                                              >  2:1918354‑M2/1‑94 (MQ=255)
     tCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtcag                                                                                                >  2:66673‑M2/1‑93 (MQ=255)
     tCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCg                                                                                             >  1:477970/1‑100 (MQ=255)
     tCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCg                                                                                             >  2:1130559/1‑100 (MQ=255)
     tCGGATGCGACGCTGACGCATCTTATACGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCATGACAGACGTAACGCAtcaagag                                                                                             <  2:2544733‑M2/100‑8 (MQ=255)
       ggATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAt                                                                                           <  1:1385529/100‑1 (MQ=255)
         aTGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAttt                                                                                         >  1:2035613/1‑100 (MQ=255)
           gCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTg                                                                                       <  1:2622682/100‑1 (MQ=255)
           gCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTg                                                                                       <  1:2622213/100‑1 (MQ=255)
           gCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTg                                                                                       <  2:2316063/100‑1 (MQ=255)
           gCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTg                                                                                       <  2:2278565/100‑1 (MQ=255)
            cGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGc                                                                                      >  2:1006585/1‑100 (MQ=255)
             gACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCt                                                                                     >  2:2164720/1‑100 (MQ=255)
             gACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCt                                                                                     <  2:2175699/100‑1 (MQ=255)
              aCGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTa                                                                                    >  1:684985/1‑100 (MQ=255)
              aCGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTa                                                                                    <  1:2293579/100‑1 (MQ=255)
              aCGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTa                                                                                    <  2:477968/100‑1 (MQ=255)
                gCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTAtt                                                                                  >  1:2014016/1‑100 (MQ=255)
                gCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTAtt                                                                                  <  2:65448/100‑1 (MQ=255)
                 cTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTAtt                                                                                  >  2:3088932/1‑99 (MQ=255)
                   ggCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTac                                                                               <  1:2526052/100‑1 (MQ=255)
                   ggCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTac                                                                               >  1:653106/1‑100 (MQ=255)
                   ggCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTac                                                                               <  2:2516440/100‑1 (MQ=255)
                   ggCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTac                                                                               >  2:96218/1‑100 (MQ=255)
                   ggCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTac                                                                               <  1:2336994/100‑1 (MQ=255)
                     cgcgTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTacac                                                                             >  1:298771/1‑100 (MQ=255)
                      gcgTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTAcaca                                                                            <  2:792557/100‑1 (MQ=255)
                           ttATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACt                                                                       >  1:1515067/1‑100 (MQ=255)
                             aTCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTcc                                                                     <  1:1919295/100‑1 (MQ=255)
                              tCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTccc                                                                    <  1:944775/100‑1 (MQ=255)
                              tCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTccc                                                                    <  2:2841144/100‑1 (MQ=255)
                                 gACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGc                                                                 >  1:370339/1‑100 (MQ=255)
                                  aCCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCg                                                                <  2:320936/100‑1 (MQ=255)
                                   ccTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGt                                                               <  1:2998792/100‑1 (MQ=255)
                                    cTACAAAGTTATGAAAATTCTTTGACGAGTATGTTATATGTAGTTTTGAGATTTGTAATGAATTAGGCGTTGTTTGTATTGACACAGTACTCCCttc                                                                 >  2:256918/1‑95 (MQ=255)
                                     tACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCg                                                                <  1:2286742/97‑1 (MQ=255)
                                     tACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGtag                                                             >  2:2998763/1‑98 (MQ=255)
                                     tACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTga                                                             <  2:1439838/100‑1 (MQ=255)
                                     tACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTga                                                             >  1:2212621/1‑100 (MQ=255)
                                     tACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCCATTTACACAGTACTCCCTGCGTg                                                              <  1:1303256/99‑1 (MQ=255)
                                      aCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTgag                                                            <  2:2278603/100‑1 (MQ=255)
                                       cAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTgaga                                                           >  1:1929927/1‑100 (MQ=255)
                                       cAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTgaga                                                           >  2:1759087/1‑100 (MQ=255)
                                        aaaGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGAt                                                          <  1:1587731/100‑1 (MQ=255)
                                          aGTTATGAAAATAAGATGTATAGTAGGTTATTTGTAGGCCTGACAAGCGTAGCGCATCATACGATTTTGCTAGTTACACATTGCTCCCTTCGTGAGAt                                                          <  2:2155507/98‑1 (MQ=25)
                                              aTGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAAt                                                    <  2:2377417/100‑1 (MQ=255)
                                               tGAAAATTCGATGAATAGTATGTTATTTTTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAAt                                                    <  1:1812292/99‑1 (MQ=255)
                                               tGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAAtt                                                   >  1:2418615/1‑100 (MQ=255)
                                                gAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTa                                                  >  1:2446215/1‑100 (MQ=255)
                                                gAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTa                                                  <  2:83358/100‑1 (MQ=255)
                                                  aaaTTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATc                                                >  1:1163162/1‑100 (MQ=255)
                                                   aaTTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATcg                                               <  1:721359/100‑1 (MQ=255)
                                                   aaTTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATcg                                               <  1:2170557/100‑1 (MQ=255)
                                                   aaTTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATcg                                               <  1:488759/100‑1 (MQ=255)
                                                   aaTTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATcg                                               <  1:982406/100‑1 (MQ=255)
                                                     ttCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATcgcg                                             <  1:2843481/100‑1 (MQ=255)
                                                        gATGAATAGTATGTTATGTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTcc                                          >  2:3032829/1‑100 (MQ=255)
                                                          tGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAg                                        <  1:1560090/100‑1 (MQ=255)
                                                          tGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAg                                        <  1:1559834/100‑1 (MQ=255)
                                                          tGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAg                                        >  1:273521/1‑100 (MQ=255)
                                                            aaTAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCa                                      >  1:147811/1‑100 (MQ=255)
                                                               aGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtcaggcctacaaataacatactattcatcgaattttcataactttgtaggtcggataagacgcgc                                   <  1:733642‑M2/100‑66 (MQ=255)
                                                               aGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATgg                                   <  2:1856343/100‑1 (MQ=255)
                                                                   tGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTa                               <  2:2781817/100‑1 (MQ=255)
                                                                   tGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTa                               <  1:2139398/100‑1 (MQ=255)
                                                                    gctATTTGTAGGCCTGACAGGCGTAGCGCATGAAGCGATTTTGGTATTTACACAGTACTCCCTGCGTGAGCTTCCAATTATCGAATCCAGCATGGTGTa                               >  2:171748/3‑99 (MQ=255)
                                                                    gTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTAt                              >  1:1476925/1‑100 (MQ=255)
                                                                      tATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCa                            >  2:167504/1‑100 (MQ=255)
                                                                       aTTTGTAGGCCTGACAGGCGTAGCGCAtcaggcctacaaataacatactattcatcgaattttcataactttgtaggtcggataagacgcgccagcgtcg                           <  1:683260‑M2/100‑74 (MQ=255)
                                                                         ttGTAGGCCTGACAGGCGTAGCGCAtcaggcctacaaataacatactattcatcgaattctcataactttgtaggtcggataagacgcgccagcgtcgc                          <  2:2918853‑M2/99‑75 (MQ=255)
                                                                           gTAGGCCTGACAGGCGTAGCGCAtcaggcctacaaataacatactattcatcgaattttcataactttgtaggtcggataagacgcgccagcgtcgcatc                       <  2:2720164‑M2/100‑78 (MQ=255)
                                                                           gTAGGCCTGACAGGCGTAGCGCAtcaggcctacaaataacatactattcatcgaattttcataactttgtaggtcggataagacgcgccagcgtcgcatc                       <  1:2800204‑M2/100‑78 (MQ=255)
                                                                           gTAGGCCTGACAGGCGTAGCGCAtcaggcctacaaataacataatattcatcgaattttcataactttgtaggccggataagacgcgcaagcgtcgcatc                       <  1:545120‑M2/100‑78 (MQ=255)
                                                                           gTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAg                       >  1:432180/1‑100 (MQ=255)
                                                                            tAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAgc                      <  1:1961618/100‑1 (MQ=255)
                                                                             aGGCCTGACAGGCGTAGCGCAtcaggcctacaaataacatactattcatcgaattttcataactttgtaggtcggataagacgcgccagcgtcgcatccg                     <  1:1082804‑M2/100‑80 (MQ=255)
                                                                             aGGCCTGACAGGCGTAGCGCAtcaggcctacaaataacatactattcatcgaattttcataactttgtaggtcggataagacgcgccagcgtcgcatccg                     <  1:869908‑M2/100‑80 (MQ=255)
                                                                             aGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAgct                     >  2:1286216/1‑100 (MQ=255)
                                                                              ggCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAgctg                    >  1:594786/1‑100 (MQ=255)
                                                                              ggCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAgctg                    <  1:679249/100‑1 (MQ=255)
                                                                               gCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAgctgc                   <  1:2963264/100‑1 (MQ=255)
                                                                                ccTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAgctgct                  >  1:1095016/1‑100 (MQ=255)
                                                                                ccTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAgctgct                  >  2:112817/1‑100 (MQ=255)
                                                                                 cTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCtt                 <  2:2688645/100‑1 (MQ=255)
                                                                                 cTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCtt                 <  2:2207375/100‑1 (MQ=255)
                                                                                  tGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTa                >  2:1023503/1‑100 (MQ=255)
                                                                                  tGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTa                >  1:364297/1‑100 (MQ=255)
                                                                                   gACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAg               <  2:2011822/100‑1 (MQ=255)
                                                                                   gACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAg               <  1:2930642/100‑1 (MQ=255)
                                                                                    aCAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCCGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAg               <  1:2318597/99‑1 (MQ=255)
                                                                                           tAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGTTATCAGc       <  2:2165586/100‑1 (MQ=255)
                                                                                            aGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGTTATCAGCg      >  1:2132974/1‑100 (MQ=255)
                                                                                            aGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGTTATCAGCg      <  1:591216/100‑1 (MQ=255)
                                                                                            aGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGTTATCAGCg      >  1:2987521/1‑100 (MQ=255)
                                                                                               gcATCAGGCGATTGTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGTTATCAGCGATa   >  1:2090097/1‑100 (MQ=255)
                                                                                                 |                                                                                                  
TTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGTTATCAGCGATAC  >  NC_000913/3650708‑3650903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.