BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3910443 =	NA (NA)	5 (0.050)	5/168	NT	NA	noncoding (1/35 nt)	REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	3910474 =	NA (NA)	5 (0.050)	5/168	NT	NA	noncoding (32/35 nt)	REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 134 total aligned reads displayed.

AAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCGT  >  NC_000913/3910376‑3910573

ttcgcgctgcgtggaagaccaatattaaagacagtagcggtaagccgctgtactaataaaactccagGCCGGATGCGGCGTAAAACACCGTACCCGGCCt                                                                                                    >  2:2542321‑M1/68‑100 (MQ=255)

 aaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTg                                                                                                   >  2:30669/1‑100 (MQ=255)

   gcgctgcgtggaagaccaatattaaagacaggagcggtaagccgctgtactaataaaactccagGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGa                                                                                                 >  1:1414215‑M1/65‑100 (MQ=255)

      ggCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGtt                                                                                              >  1:983334/1‑100 (MQ=255)

      ggCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGtt                                                                                              >  1:352057/1‑100 (MQ=255)

        cTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACACGTTTACAAAGTCATTTAGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGtttt                                                                                            >  1:215048/1‑100 (MQ=255)

          tGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttat                                                                                          <  2:302862/100‑1 (MQ=255)

           ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         <  2:232697/100‑1 (MQ=255)

           ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         >  1:1706305/1‑100 (MQ=255)

            gTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatta                                                                                        >  2:686220/1‑100 (MQ=255)

            gTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatta                                                                                        >  2:1266240/1‑100 (MQ=255)

            gTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatta                                                                                        <  1:81058/100‑1 (MQ=255)

            gTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatta                                                                                        <  1:3025928/100‑1 (MQ=255)

              tGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGt                                                                                      >  1:1115300/1‑100 (MQ=255)

              tGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGt                                                                                      <  2:78634/100‑1 (MQ=255)

                cAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTAc                                                                                    <  2:1584729/100‑1 (MQ=255)

                cAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTAc                                                                                    >  1:2957743/1‑100 (MQ=255)

                 aGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCTGCGTAAAACGCCGTACTCGGCCTGGAGTTTTATTAGTACa                                                                                   <  2:1493710/100‑1 (MQ=255)

                  gCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAg                                                                                  >  1:2127109/1‑100 (MQ=255)

                   ccATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGc                                                                                 >  2:557806/1‑100 (MQ=255)

                    cATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACTCGGCCTGGAGTTTTATTAGTACAGCg                                                                                <  1:1893439/100‑1 (MQ=255)

                      tAAGTTACTCTTCAGTTAAACGCGTTTACAAAGACATTTTGTAATGCAGGATGCGGCGTAAAACAGCGTACCCGGCCGGGCGTTTTATTAGTACAg                                                                                  >  2:1862697/1‑96 (MQ=255)

                        aGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCtt                                                                            >  1:1575816/1‑100 (MQ=255)

                           tACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTAcc                                                                         <  1:1711963/100‑1 (MQ=255)

                           tACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTAcc                                                                         >  2:715359/1‑100 (MQ=255)

                             ctctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGc                                                                       <  1:1446079/100‑1 (MQ=255)

                               ctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTa                                                                     <  2:2922802/100‑1 (MQ=255)

                               ctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTa                                                                     >  1:2904032/1‑100 (MQ=255)

                               ctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTa                                                                     >  1:3085990/1‑100 (MQ=255)

                                ttCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTAc                                                                    <  1:2833301/100‑1 (MQ=255)

                                ttCAGTTAAACGCGTTTACAAAGTCATTTCGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTAc                                                                    <  2:1872627/100‑1 (MQ=255)

                                 tCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACt                                                                   <  2:2610507/100‑1 (MQ=255)

                                  cAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTg                                                                  >  1:262818/1‑100 (MQ=255)

                                  cAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTg                                                                  <  1:1668644/100‑1 (MQ=255)

                                    gTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTc                                                                <  1:2571198/100‑1 (MQ=255)

                                    gTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTc                                                                >  1:625105/1‑100 (MQ=255)

                                      tAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCtt                                                              <  2:1452583/100‑1 (MQ=255)

                                       aaaCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCttt                                                             <  1:2712255/100‑1 (MQ=255)

                                         aCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTaa                                                           <  1:648773/100‑1 (MQ=255)

                                          cgcgTTTACAAAGTCATTTTGTAATGCCGGATGCGTCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAat                                                          <  2:910816/100‑1 (MQ=255)

                                          cgcgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAat                                                          <  1:1517089/100‑1 (MQ=255)

                                             gTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTATTGTCTTTAATAtt                                                       <  2:1927844/100‑1 (MQ=255)

                                             gTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATAtt                                                       >  1:882/1‑100 (MQ=255)

                                             gTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATAtt                                                       <  1:1554397/100‑1 (MQ=255)

                                              tttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTg                                                      <  2:257549/100‑1 (MQ=255)

                                               ttACAAAGTCATTTTGTTATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTgg                                                     <  2:2360907/100‑1 (MQ=255)

                                               ttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTgg                                                     <  1:1992545/100‑1 (MQ=255)

                                               ttACAAAGTCATTTTGTAATGCCGGATGAGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTgg                                                     <  2:2030198/100‑1 (MQ=255)

                                                tACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGt                                                    >  2:3075849/1‑100 (MQ=255)

                                                 aCAAAGTCCTTTTGTAATGCCGTATGCGGCGTAAAACACCTTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAAGATTGGTc                                                   <  2:1008875/100‑1 (MQ=255)

                                                  cAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCt                                                  >  1:2991359/1‑100 (MQ=255)

                                                  cAAAGTCATTTTGTAATGCCGGATGCGGCATAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCt                                                  >  2:2177500/1‑100 (MQ=255)

                                                   actaataaaactccaggccgggtacggtggtttacgccgcatccggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCtt                                                 >  2:2463258‑M2/48‑100 (MQ=255)

                                                    aaGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTc                                                >  2:2089597/1‑100 (MQ=255)

                                                    aaGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTc                                                >  2:2867692/1‑100 (MQ=255)

                                                    aaGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGGTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGCTCTTc                                                >  2:1607743/1‑100 (MQ=255)

                                                     aGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTcc                                               <  2:1994239/100‑1 (MQ=255)

                                                      gTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCa                                              >  2:290027/1‑100 (MQ=255)

                                                      gTCATTTTGAAAGGCCGGATGCGGCGTAAAGCACCGTACCCGGCCTCGAGTTTTATTGGTACGGCGGCTTACCGCTACTGTCTTTAATATTgg                                                     <  2:2763289/93‑1 (MQ=255)

                                                         agttggTAATGCGGGATGCGGCGTAAGACACCGTGCCCGTCGTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGc                                           <  1:2128169/95‑1 (MQ=255)

                                                         aTTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGc                                           >  1:1071615/1‑100 (MQ=255)

                                                         aTTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGc                                           >  1:1659621/1‑100 (MQ=255)

                                                           tttGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAg                                         >  2:188542/1‑100 (MQ=255)

                                                            ttGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAgc                                        <  2:1530301/100‑1 (MQ=255)

                                                              tccaggccgggtacggtgttttacgccgcatccggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTCCTGTCTTTAATATTGGTCTTCCACGCAgcgc                                      >  1:1414215‑M2/37‑100 (MQ=255)

                                                              gTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAgcgc                                      <  1:1183976/100‑1 (MQ=255)

                                                                aaTGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGcgcg                                     >  2:1224581/1‑99 (MQ=255)

                                                                   gccgggtacggtgttttacgccgcatccggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAAcc                                 >  1:299876‑M2/32‑100 (MQ=255)

                                                                     CGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTg                               >  1:3072467‑M1/1‑100 (MQ=255)

                                                                     CGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTg                               >  1:543019‑M1/1‑100 (MQ=255)

                                                                      tcttGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGt                              <  1:2212674/97‑1 (MQ=255)

                                                                      GGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGt                              <  1:1830790‑M1/100‑1 (MQ=255)

                                                                        aTGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTc                            <  1:1600229/100‑1 (MQ=255)

                                                                        aTGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTc                            <  2:1354898/100‑1 (MQ=255)

                                                                        aTGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTc                            <  2:2558/100‑1 (MQ=255)

                                                                         tGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGtaga                           >  2:2212654/1‑97 (MQ=255)

                                                                         tGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCa                           <  1:2487610/100‑1 (MQ=255)

                                                                          gcggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGACCCTGTTCaa                          >  2:1845644/1‑100 (MQ=255)

                                                                            ggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACt                        <  2:2265773/100‑1 (MQ=255)

                                                                             gcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTa                       >  2:1633972/1‑100 (MQ=255)

                                                                             gcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTa                       >  2:2809151/1‑100 (MQ=255)

                                                                              cgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTac                      <  1:1674240/100‑1 (MQ=255)

                                                                              cgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTac                      <  2:352055/100‑1 (MQ=255)

                                                                                tAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTacac                    <  1:2616022/100‑1 (MQ=255)

                                                                                 aaaaCACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACt                   >  1:2442513/1‑100 (MQ=255)

                                                                                  aaaCACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTa                  >  2:1356655/1‑100 (MQ=255)

                                                                                       ccGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCgg             >  1:1279438/1‑100 (MQ=255)

                                                                                       ccGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCgg             >  2:2516334/1‑100 (MQ=255)

                                                                                       ccGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCgg             >  2:854964/1‑100 (MQ=255)

                                                                                        cGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGc            <  2:427957/100‑1 (MQ=255)

                                                                                        cGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGc            <  1:1505196/100‑1 (MQ=255)

                                                                                         gttcccGGTCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCa           <  2:1892032/97‑1 (MQ=255)

                                                                                         gTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCa           <  1:2549193/100‑1 (MQ=255)

                                                                                          tACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGCTCAACTACACTATCCGGCAg          >  2:2387847/1‑100 (MQ=255)

                                                                                            cccGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGc        <  1:2655568/100‑1 (MQ=255)

                                                                                             ccggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCt       >  2:844283‑M2/6‑100 (MQ=255)

                                                                                               ggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTCTCCGGCAGgcttg     <  1:2110503‑M2/97‑3 (MQ=255)

                                                                                               ggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTgg     <  1:2169239‑M2/97‑1 (MQ=255)

                                                                                                 cCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCg   <  1:2667469‑M2/99‑1 (MQ=255)

                                                                                                 cCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCg   <  1:1732759‑M2/99‑1 (MQ=255)

AAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCGT  >  NC_000913/3910376‑3910573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.