| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3941643 | 111 (1.020) | 21 (0.210) | 10/166 | NT | 15.8% | intergenic (‑316/‑165) | yieP/rrsC | putative transcriptional regulator/16S ribosomal RNA of rrnC operon |
| ? | NC_000913 | = 3941655 | 120 (1.180) | intergenic (‑328/‑153) | yieP/rrsC | putative transcriptional regulator/16S ribosomal RNA of rrnC operon | |||||
Only 100 of 160 total aligned reads displayed.
GGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGTCTC > NC_000913/3941556‑3941753 | ggTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAa < 2:1890830‑M2/100‑2 (MQ=255) tctcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAagcg < 2:2015303‑M2/100‑5 (MQ=255) ctcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAagcgg < 2:475893‑M2/100‑6 (MQ=255) tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAagcggc > 2:2113958‑M2/1‑94 (MQ=255) tGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACt > 1:251639/1‑100 (MQ=38) agaACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGc < 1:332573/100‑1 (MQ=38) cTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCtt > 1:890704/1‑100 (MQ=38) tCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCttt < 1:1749568/100‑1 (MQ=38) ccGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTa < 2:2717367/100‑1 (MQ=38) ccGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTa > 1:2300237/1‑100 (MQ=38) ccGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTa > 1:1941818/1‑100 (MQ=35) ggCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAAc > 1:78031/1‑100 (MQ=38) agagAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGAAAAGAAAAAAAAAAGCAAAGCGGCACTGCTCTTTAACaa < 2:462374/99‑1 (MQ=11) agagAAAGAAAAAATAAATGCTTGCCTCTGTAGCAGGAAAGCGTATTATGCACACCCCGCGTCGCTGTGAAAAAGCAAAGCGGCACTGCTCttt < 2:1033539/94‑1 (MQ=11) aaagaAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAAt < 2:2923821/98‑1 (MQ=38) gagaaaagcaaagaaatgcttgactcTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAagcggcgcggggtgtgcataatac < 1:51730‑M2/91‑25 (MQ=255) agaAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAAttt < 1:1081989/100‑1 (MQ=38) agaAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAAttt < 1:421755/100‑1 (MQ=38) gaAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTa < 1:773618/100‑1 (MQ=38) gaAAGCAAAAATAAATGCTTGACTCTATAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTCACAATTTa > 2:2499200/1‑100 (MQ=255) aaGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATc < 2:890701/100‑1 (MQ=38) aaGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATc < 1:2174091/100‑1 (MQ=38) aaGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATc < 1:2124542/100‑1 (MQ=38) aaGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATc < 1:824224/100‑1 (MQ=38) aGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCa > 2:1955501/1‑100 (MQ=38) gCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGAGAAACTGAAAAAAAGCAAAGCGGCACGGCTCTTTAACAATTTATCAg < 2:1900834/100‑1 (MQ=11) cAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGa > 1:1778246/1‑100 (MQ=35) cAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGa > 2:2796272/1‑100 (MQ=38) cAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGa > 1:2798962/1‑100 (MQ=38) aaaaaTAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGAc > 1:1049910/1‑100 (MQ=35) aaaaTAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACa < 1:2377368/100‑1 (MQ=38) aatGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCtgt < 2:839066/100‑1 (MQ=38) gCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCtgtgtg < 2:1578168/100‑1 (MQ=38) cTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGTCACTCCGCTTTAACAATGTATCAGACAATCtgtgtg > 2:1811759/1‑99 (MQ=11) cTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTgg < 2:2019900/100‑1 (MQ=38) cTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTgg > 1:2321528/1‑100 (MQ=38) ttGACTCTGTAGCGGGAAAGCGTATTATTCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTggg < 2:3091359/100‑1 (MQ=38) ttGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTggg > 1:1971585/1‑100 (MQ=38) tGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGc > 2:2632405/1‑100 (MQ=38) tGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGc < 1:1658951/100‑1 (MQ=38) tGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCAAAAAAAAAAAAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTggg < 2:986673/99‑1 (MQ=11) tctGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTc > 1:1413509/1‑100 (MQ=38) ctGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCg > 1:992628/1‑100 (MQ=38) ctGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCg < 1:2465109/100‑1 (MQ=38) gTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGaa < 1:396278/100‑1 (MQ=38) gTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGaa > 2:2791853/1‑100 (MQ=35) gTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGaa > 2:394067/1‑100 (MQ=38) tAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAg < 2:2270320/100‑1 (MQ=38) aGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACACTTTATCAGACAATCTGTGTGGGCACTCGAAGa > 2:1060960/1‑100 (MQ=38) aGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGa < 2:2373414/100‑1 (MQ=38) ggAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACg > 1:306645/1‑100 (MQ=38) aaGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAagcggcgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgct < 1:282566‑M2/100‑61 (MQ=255) aGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAagcggcgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctt < 1:1181889‑M2/100‑62 (MQ=255) gCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTc > 1:1599419/1‑100 (MQ=33) gCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTc > 1:2866832/1‑100 (MQ=33) cGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCt < 2:815093/100‑1 (MQ=33) cGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCt < 2:935291/100‑1 (MQ=33) gTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCtt < 1:1907868/100‑1 (MQ=33) tattatGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTa > 2:1725070/1‑100 (MQ=33) ttatGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAAc < 1:1997371/100‑1 (MQ=33) ttatGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAAc < 2:1599405/100‑1 (MQ=33) tGCACACCCCGCGCCGCTGAGAAAAAGCGAagcggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccg < 1:1439295‑M2/100‑71 (MQ=255) tGCACACCCCGCGCCGCTGAGAAAAAGCAAagcggcgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccg > 2:1181882‑M2/1‑30 (MQ=255) tGCACACCCCGCGCCGCTGAGAAAAAGCAAagcggcacggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccg < 2:2150963‑M2/100‑71 (MQ=255) cacaCCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGc > 1:1146432/1‑100 (MQ=33) cacaCCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGc > 1:1347973/1‑100 (MQ=33) cacaCCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTCAACGTCGc > 1:1185364/1‑100 (MQ=17) acacCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCa < 1:2709040/100‑1 (MQ=33) cacCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCaa > 2:1530634/1‑100 (MQ=33) ncccgCGCCGCTGAGAAAAAGCGAagcggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctcttccggagttc < 2:2336368‑M2/99‑77 (MQ=255) ccccGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGa > 2:2969697/1‑100 (MQ=33) ccccGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGa > 1:514052/1‑100 (MQ=33) ccccGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGa > 1:671695/1‑100 (MQ=33) cccGCGCCGCTGAGAAAAAGCAAagcggcgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttct < 1:2687440‑M2/100‑78 (MQ=255) cccGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGAc < 1:2392073/100‑1 (MQ=33) cccGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGAc < 2:2876148/100‑1 (MQ=33) ccGCGCCGCTGAGAAAAAGCGAagcggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctc < 1:147883‑M2/100‑79 (MQ=255) ccGCGCCGCTGAGAAAAAGCAAagcggcgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctc < 1:2427076‑M2/100‑79 (MQ=255) ccGCGCCGCTGAGAAAAAGCAAagcggcgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctc < 1:1845758‑M2/100‑79 (MQ=255) ccGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACg < 2:1252378/100‑1 (MQ=33) cgcgCCGCTGAGAAAAAGCGAagcggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctca < 2:679980‑M2/100‑80 (MQ=255) cgcgCCGCTGAGAAAAAGCAAagcggcgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctca < 1:638757‑M2/100‑80 (MQ=255) gccgcTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGaaaa < 2:117967/100‑1 (MQ=33) cgcTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAAt > 1:1750904/1‑100 (MQ=33) gcTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATg > 1:691775/1‑100 (MQ=33) tGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGaa > 1:1022761/1‑100 (MQ=33) tGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGaa > 1:1578736/1‑100 (MQ=33) agaAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATa > 2:420079/1‑100 (MQ=33) agaAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATa < 1:452221/100‑1 (MQ=33) gaAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCCCTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATAc > 2:1848043/1‑100 (MQ=18) gaAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATAc > 1:1330773/1‑100 (MQ=33) aaaaaGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATAcc < 2:1634431/100‑1 (MQ=33) aaaaaGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATAcc > 2:2911999/1‑100 (MQ=33) aaaaGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCa > 1:2196155/1‑100 (MQ=33) aaaaGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGAAAAAAAAAAAAAAATGAATACCa < 2:2731016/100‑1 (MQ=11) aagcaaagcGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAg < 1:1774898/100‑1 (MQ=33) caaagcGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGtct > 1:2932550/1‑100 (MQ=31) aaagcGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGtctc > 2:294957/1‑100 (MQ=11) aaagcGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGtctc > 1:1085238/1‑100 (MQ=11) aaagcGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGtctc < 2:258751/100‑1 (MQ=11) | GGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGTCTC > NC_000913/3941556‑3941753 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |