New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4607047127 (1.170)9 (0.090) 8/168 NT 7.4% coding (654/1032 nt) rsmC 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent
?NC_000913 = 4607088 106 (1.030)coding (613/1032 nt) rsmC 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent
Rejected: Frequency below cutoff threshold.

Only 100 of 135 total aligned reads displayed.

CGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACGCCAGGCA  >  NC_000913/4606989‑4607186
                                                                                                   |                                                                                                  
cgcgGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCcaca                                                                                                    <  2:2986835/100‑1 (MQ=255)
    gctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccg                                                                                                >  2:2102576‑M2/1‑96 (MQ=255)
    gctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccg                                                                                                >  1:2149035‑M2/1‑96 (MQ=255)
     ctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccga                                                                                               >  2:1306505‑M2/1‑95 (MQ=255)
       ggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACa                                                                                             <  1:2440000/100‑1 (MQ=255)
         ctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACAt                                                                                            >  1:1850585/1‑99 (MQ=255)
         ctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATc                                                                                           >  1:1176016/1‑100 (MQ=255)
         ctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATc                                                                                           >  2:2250170/1‑100 (MQ=255)
          ttCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATcc                                                                                          <  2:2047851/100‑1 (MQ=255)
          ttCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATcc                                                                                          <  2:1249607/100‑1 (MQ=255)
           tCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCa                                                                                         <  1:115673/100‑1 (MQ=255)
            cTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAg                                                                                        <  2:2005848/100‑1 (MQ=255)
             tACCGCCGGGGCAGAGCCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGc                                                                                       >  1:1218817/1‑100 (MQ=255)
             tACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGc                                                                                       <  1:2165278/100‑1 (MQ=255)
              aCCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCa                                                                                      >  2:2504288/1‑100 (MQ=255)
              aCCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCa                                                                                      >  2:3084934/1‑100 (MQ=255)
               ccgccgGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGAAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATACAGCAc                                                                                     >  2:2980067/1‑100 (MQ=255)
                cgccgGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACt                                                                                    >  1:899576/1‑100 (MQ=255)
                  ccgGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACttt                                                                                  >  1:2928342/1‑100 (MQ=255)
                  ccgGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACttt                                                                                  <  2:1840927/100‑1 (MQ=255)
                  ccgGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACttt                                                                                  <  2:1186385/100‑1 (MQ=255)
                     gggCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGCCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTAcc                                                                               <  2:1384192/100‑1 (MQ=255)
                      ggCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCt                                                                              >  2:2871536/1‑100 (MQ=255)
                       gCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCtt                                                                             <  1:828517/100‑1 (MQ=255)
                       gCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCtt                                                                             >  2:959473/1‑100 (MQ=255)
                        cAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCttt                                                                            >  2:2370575/1‑100 (MQ=255)
                        cAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCttt                                                                            >  1:315833/1‑100 (MQ=255)
                          gagaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcg                                                                          <  1:1172681‑M2/100‑27 (MQ=255)
                          gagaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCg                                                                          >  2:866390/1‑100 (MQ=255)
                           agaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgt                                                                         <  2:2199450/100‑1 (MQ=255)
                            gaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgtg                                                                        <  2:1517821/100‑1 (MQ=255)
                            gaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgtg                                                                        <  1:2337073/100‑1 (MQ=255)
                              cATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGtgtg                                                                      >  1:1954954/1‑100 (MQ=255)
                              cATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGtgtg                                                                      <  1:460702/100‑1 (MQ=255)
                               aTCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGc                                                                     <  2:2750976/100‑1 (MQ=255)
                                 cGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCgg                                                                   >  1:1070409/1‑100 (MQ=255)
                                 cGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCAATTTACCTTTCCTGTGCgg                                                                   >  2:1216891/1‑100 (MQ=255)
                                    acaAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGCGt                                                                >  1:1321477/1‑100 (MQ=255)
                                     caAGGTGAGACGAATTTTCGGCGAATTGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGt                                                                <  1:1575284/99‑1 (MQ=255)
                                       ttccgatctgAATTTTCGGCGAATGGCGCGCAAAGGCAACTGACAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTaa                                                             <  2:1993234/91‑1 (MQ=255)
                                        ggTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAAc                                                            <  1:1056121/100‑1 (MQ=255)
                                        ggTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAAc                                                            >  1:1551724/1‑100 (MQ=255)
                                        ggTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAAc                                                            >  2:2668706/1‑100 (MQ=255)
                                          tGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGt                                                          >  2:326368/1‑100 (MQ=255)
                                          tGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGt                                                          >  2:2081354/1‑100 (MQ=255)
                                           gagaCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTc                                                         <  1:933051/100‑1 (MQ=255)
                                           gagaCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTc                                                         <  1:1107300/100‑1 (MQ=255)
                                           gagaCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTc                                                         <  1:2429061/100‑1 (MQ=255)
                                             gaCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCga                                                       >  1:2649734/1‑100 (MQ=255)
                                              aCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCgag                                                      <  2:212966/100‑1 (MQ=255)
                                               cGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCgaga                                                     >  1:1996665/1‑100 (MQ=255)
                                               cGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCgaga                                                     <  1:2673312/100‑1 (MQ=255)
                                                gAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtaga                                                    <  1:1492695‑M2/100‑49 (MQ=255)
                                                gAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGagag                                                    <  2:2753675/100‑1 (MQ=255)
                                                 aaTTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaa                                                   <  1:20609‑M2/100‑50 (MQ=255)
                                                 aaTTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagc                                                   <  2:2414332/100‑1 (MQ=255)
                                                  aTTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaag                                                  <  1:1582814‑M2/100‑51 (MQ=255)
                                                  aTTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagca                                                  <  2:2778100/100‑1 (MQ=255)
                                                   ttttCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagcag                                                 >  1:64907/1‑100 (MQ=255)
                                                    tttCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagcagc                                                <  1:866392/100‑1 (MQ=255)
                                                      tCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCaa                                              <  1:728382/100‑1 (MQ=255)
                                                        ggCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagccagcc                                            <  2:2402918‑M2/100‑57 (MQ=255)
                                                        ggCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttatgcgatgtctctgccccggcggtagaagccagcc                                            <  2:1639558‑M2/100‑57 (MQ=255)
                                                        ggCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACt                                            >  2:2405132/1‑100 (MQ=255)
                                                        ggCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACt                                            >  1:3103134/1‑100 (MQ=255)
                                                          cGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTgg                                          <  1:2965383/100‑1 (MQ=255)
                                                             aTGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTa                                       >  2:406378/1‑100 (MQ=255)
                                                                  gcgcAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCg                                    <  2:169516/98‑1 (MQ=255)
                                                                     cAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATc                               >  1:2383729/1‑100 (MQ=255)
                                                                      aaaGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATcc                              <  1:407254/100‑1 (MQ=255)
                                                                           cAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCGACCGACATCCAGAcc                         >  1:3062604/1‑100 (MQ=255)
                                                                             aCTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAATTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGt                       >  2:2178369/1‑100 (MQ=255)
                                                                              cTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTc                      <  1:326370/100‑1 (MQ=255)
                                                                                gAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTcgc                    >  1:188494/1‑100 (MQ=255)
                                                                                 aaaGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTcgcg                   <  1:856760/100‑1 (MQ=255)
                                                                                  aaGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCgg                  <  1:2773767/100‑1 (MQ=255)
                                                                                   aGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGc                 <  1:1365901/100‑1 (MQ=255)
                                                                                   aGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGc                 <  2:2296534/100‑1 (MQ=255)
                                                                                   aGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGc                 <  1:959477/100‑1 (MQ=255)
                                                                                   aGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGc                 >  1:229156/1‑100 (MQ=255)
                                                                                   aGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGc                 >  2:1159760/1‑100 (MQ=255)
                                                                                   aGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGc                 <  1:157109/100‑1 (MQ=255)
                                                                                     cACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTa               >  2:2033649/1‑100 (MQ=255)
                                                                                       ngCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTaaa             >  1:628711/2‑100 (MQ=255)
                                                                                       cGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTaaa             >  2:1229287/1‑100 (MQ=255)
                                                                                       cGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTaa              <  2:158859/99‑1 (MQ=255)
                                                                                         cccTCGCCACAGCCGACATCCCGCACCTTACCTTTCGTGCGCGCAGTTAACGTCGAGAGCAGCAACTATCTACCGACATCCAGACCGTCGCGGCAAAaca           >  2:2253968/1‑100 (MQ=255)
                                                                                         cccGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAaca           >  2:420714/1‑100 (MQ=255)
                                                                                         cccGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAaca           >  2:2905653/1‑100 (MQ=255)
                                                                                         cccGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAaca           >  1:1625058/1‑100 (MQ=255)
                                                                                           cgcgCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACg         <  1:2673581/100‑1 (MQ=255)
                                                                                             cgcCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACGcc       <  1:537775/100‑1 (MQ=255)
                                                                                              gcCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagccagccgcgcaacacttgcggccaacggtgttgaaggtgaagtc      >  2:1172674‑M2/1‑6 (MQ=255)
                                                                                               ccACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGCGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACGCCAg     <  2:1490382/100‑1 (MQ=255)
                                                                                               ccACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACGCCAg     <  1:248677/100‑1 (MQ=255)
                                                                                               ccACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGACTACCGACATCCAGACCGTCGCGGCTAAACACGCCa      <  1:2190457/99‑1 (MQ=255)
                                                                                                 acaGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACGCCAGGc   >  2:1289511/1‑100 (MQ=255)
                                                                                                 acaGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACGCCAGGc   >  1:3105738/1‑100 (MQ=255)
                                                                                                  caGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACGCCAGGCa  >  2:289880/1‑100 (MQ=255)
                                                                                                  caGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACGCCAGGCa  >  2:2507019/1‑100 (MQ=255)
                                                                                                   |                                                                                                  
CGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACGCCAGGCA  >  NC_000913/4606989‑4607186

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.