New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4636368100 (0.920)5 (0.050) 3/166 NT 4.9% coding (362/690 nt) creB response regulator in two‑component regulatory system with CreC
?NC_000913 = 4636382 100 (0.980)coding (376/690 nt) creB response regulator in two‑component regulatory system with CreC
Rejected: Frequency below cutoff threshold.

Only 100 of 131 total aligned reads displayed.

GGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATG  >  NC_000913/4636284‑4636481
                                                                                                  |                                                                                                   
ggCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTc                                                                                                    <  2:3107642‑M2/100‑2 (MQ=255)
 gCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTcg                                                                                                   >  2:2474496‑M2/1‑98 (MQ=255)
 gCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTcg                                                                                                   <  1:2618457‑M2/100‑3 (MQ=255)
  cTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTcga                                                                                                  <  2:641973‑M2/100‑4 (MQ=255)
  cTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTcga                                                                                                  <  2:462962‑M2/100‑4 (MQ=255)
   tGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTcgac                                                                                                 >  1:1427485‑M2/1‑96 (MQ=255)
   tGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTcgac                                                                                                 <  1:952853‑M2/100‑5 (MQ=255)
     gAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTcgacgc                                                                                               <  2:1748829‑M2/100‑7 (MQ=255)
       aaTTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCg                                                                                             >  2:2309917/1‑100 (MQ=255)
         ttGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGtc                                                                                           >  1:3030083/1‑100 (MQ=255)
             tGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTccc                                                                                       <  1:1266026/100‑1 (MQ=255)
              gCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCg                                                                                      <  2:1610316/100‑1 (MQ=255)
               cTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGt                                                                                     <  2:2701815/100‑1 (MQ=255)
               cTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGt                                                                                     <  1:970537/100‑1 (MQ=255)
                tGACGACGACGTGGCTAAACCGGTGTCGCCCCGCGAAGTTTGCGCCAGGGTGCGCACCTGTGTGCGGCGCGTGAAGCATTTCGCGACGCCGTCTCCCg                                                                                      >  2:1694159/1‑98 (MQ=255)
                 gacgacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCa                                                                                   >  1:1309187/1‑100 (MQ=255)
                  acgacTACGTGGCTAAACCTTTTGCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGGTCTCGTCGCCGTCTCCCGTCAt                                                                                  <  2:604765/100‑1 (MQ=255)
                   cgacTACGTGGCTAAACCGTTTTGACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATc                                                                                 >  2:1841500/1‑100 (MQ=255)
                      cTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGt                                                                              >  2:1557683/1‑100 (MQ=255)
                      cTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGt                                                                              >  1:2749945/1‑100 (MQ=255)
                       tACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTa                                                                             <  1:2651433/100‑1 (MQ=255)
                        aCGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTAt                                                                            >  1:2145103/1‑100 (MQ=255)
                         cGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTAtt                                                                           >  2:1114518/1‑100 (MQ=255)
                         cGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTAt                                                                            <  2:329183/99‑1 (MQ=255)
                          gTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTg                                                                          <  1:1889164/100‑1 (MQ=255)
                            ggCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGa                                                                        >  1:909700/1‑100 (MQ=255)
                              cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa                                                                      >  1:798728/1‑100 (MQ=255)
                              cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa                                                                      <  2:304372/100‑1 (MQ=255)
                               tAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGGCGCCGTCTCCCGTCATCCGTATTGGACAt                                                                     >  2:2922461/1‑100 (MQ=255)
                                aaaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAtt                                                                    >  1:1963267/1‑100 (MQ=255)
                                   ccGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttg                                                                 >  1:1214859/1‑100 (MQ=255)
                                   ccGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttg                                                                 <  1:42594/100‑1 (MQ=255)
                                   ccGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttg                                                                 >  1:2755559/1‑100 (MQ=255)
                                     gTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaa                                                               >  1:1977882/1‑100 (MQ=255)
                                      ttttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaat                                                              >  2:1007693/1‑100 (MQ=255)
                                       tttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaatt                                                             >  2:2482202/1‑100 (MQ=255)
                                        ttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaattg                                                            <  1:1922020/100‑1 (MQ=255)
                                        ttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttg                                                                 <  2:2894367/95‑1 (MQ=255)
                                        atctccccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaattg                                                            <  2:3048885/96‑1 (MQ=255)
                                         gatctccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaattga                                                           <  1:2880389/95‑1 (MQ=255)
                                          cACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaattgaa                                                          <  1:2446829/100‑1 (MQ=255)
                                           aCCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTtgaattgaat                                                         <  1:148862/100‑1 (MQ=255)
                                           aCCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTtgaattgaat                                                         >  1:2826041/1‑100 (MQ=255)
                                           aCCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTtgaattgaat                                                         >  1:1290462/1‑100 (MQ=255)
                                           aCCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTtgaattgaat                                                         >  1:3060901/1‑100 (MQ=255)
                                           aCCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTtgaattgaat                                                         <  1:562398/100‑1 (MQ=255)
                                            ccccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGCCGCCGTCTGCCGTCATCCGTATTGGACATTTtgaattgaat                                                         <  2:282233/99‑1 (MQ=255)
                                            ccccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatg                                                        >  2:189629/1‑100 (MQ=255)
                                             cccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatga                                                       >  1:666287/1‑100 (MQ=255)
                                             cccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatga                                                       >  1:558633/1‑100 (MQ=255)
                                              ccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatgaa                                                      >  1:639703/1‑100 (MQ=255)
                                              ccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatgaa                                                      <  2:2265939/100‑1 (MQ=255)
                                               cgcgAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAAc                                                     >  1:485644/1‑100 (MQ=255)
                                                gcgAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAAcc                                                    <  2:2119669/100‑1 (MQ=255)
                                                   aaGGGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCcgc                                                 <  1:1464277/100‑1 (MQ=255)
                                                      tgtgCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCgcggc                                              <  1:3091018/100‑1 (MQ=255)
                                                      tgtgCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCgcggc                                              >  2:1326936/1‑100 (MQ=255)
                                                       gtgCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCgcggcg                                             >  1:2149635/1‑100 (MQ=255)
                                                          cgcCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAg                                          >  1:1849457/1‑100 (MQ=255)
                                                             cAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATc                                       <  2:1214851/100‑1 (MQ=255)
                                                              aGGGTGCGCACCTTACTGCCTCGGGTGAAGAAGTTCTCGGCGTCGTCTCCCGTCATCGGTATTTGGTTTTTGGGATTGAATGAACCCGCGGCGCAGATCa                                      <  1:1419348/100‑1 (MQ=255)
                                                                ggTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGc                                    <  1:2419647/100‑1 (MQ=255)
                                                                ggTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGc                                    <  2:2022282/100‑1 (MQ=255)
                                                                 gTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCt                                   <  1:465849/100‑1 (MQ=255)
                                                                   gcgcACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTgg                                 >  2:2204511/1‑100 (MQ=255)
                                                                   gcgcACCTTACTGCGTCGGGTGAAGAAGTTCACGACGCCGTCTCCCGTCATCCGTATTGGACAGTATGAATTGAATGAACCCTCGGCGCAGATCAACTgg                                 >  2:1032796/1‑100 (MQ=255)
                                                                    cgcACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTgg                                 <  2:2907798/99‑1 (MQ=255)
                                                                     gcACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAGTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGtt                               <  2:67361/100‑1 (MQ=255)
                                                                      cACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGttt                              <  1:2391929/100‑1 (MQ=255)
                                                                      cACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGttt                              <  2:3044962/100‑1 (MQ=255)
                                                                      cACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGttt                              <  1:1614213/100‑1 (MQ=255)
                                                                      cACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGttt                              >  2:2748772/1‑100 (MQ=255)
                                                                       aCCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTg                             <  2:166940/100‑1 (MQ=255)
                                                                        ccTTACTGCGTCGGGTGAAGAAGTTCTcgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaaacggtttagccacgtagtcgtcagcac                            <  1:1179794‑M2/100‑74 (MQ=255)
                                                                         cTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGac                           <  2:2154871/100‑1 (MQ=255)
                                                                            aCTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAAGCCGCGGCGCAGATCAGATGGTTTGACACg                        >  2:1360478/1‑100 (MQ=255)
                                                                             cTGCGTCGGGTGAAGAAGTTCTcgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaaacggtttagccacgtagtcgtcagcaccaatt                       <  1:1462470‑M2/100‑79 (MQ=255)
                                                                             cTGCGTCGGGTGAAGAAGTTCTcgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaaacggtttagccacgtagtcgtcagcaccaatt                       <  1:2768294‑M2/100‑79 (MQ=255)
                                                                             cTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGc                       >  1:1030334/1‑100 (MQ=255)
                                                                              tGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGcc                      >  1:266925/1‑100 (MQ=255)
                                                                               gCGTCGGGTGAAGAAGTTCTcgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaaacggtttagccacgtagtcgtcagcaccaatttc                     <  1:655781‑M2/100‑81 (MQ=255)
                                                                                     ggTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAgcg               >  1:561779/1‑100 (MQ=255)
                                                                                      gTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAgcgc              >  1:146460/1‑100 (MQ=255)
                                                                                        gaagaaGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTg            >  2:1336584/1‑100 (MQ=255)
                                                                                        gaagaaGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTg            >  1:738689/1‑100 (MQ=255)
                                                                                        gaagaaGTTCTCGACGCCGTCTCCCGTCATCCGTATTGAACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGGTTGACACGCCATTAGCGCTg            >  2:1918098/1‑100 (MQ=255)
                                                                                        gaagaaGTTCTCGACGCCGTCTCCCGTCATCCGAATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGGTCAGCTGGTTTGACACGCCATTAGCGCTg            >  2:1874466/1‑100 (MQ=255)
                                                                                          agaagTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCt             <  2:1611110/97‑1 (MQ=255)
                                                                                          agaagTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGAc          >  2:110814/1‑100 (MQ=255)
                                                                                            aagTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTc        <  1:2762480/100‑1 (MQ=255)
                                                                                            aagTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTc        <  1:2139190/100‑1 (MQ=255)
                                                                                             acttCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCg       <  2:1881433/98‑1 (MQ=255)
                                                                                              gTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCgg      >  1:286977/1‑100 (MQ=255)
                                                                                                tctcGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTa    <  1:388051/100‑1 (MQ=255)
                                                                                                tctcGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTa    <  1:2765022/100‑1 (MQ=255)
                                                                                                tctcGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTa    >  1:1709350/1‑100 (MQ=255)
                                                                                                tctcGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTa    >  1:1202966/1‑100 (MQ=255)
                                                                                                 ctcGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTAt   >  1:2805209/1‑100 (MQ=255)
                                                                                                  tcGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATg  <  1:30744/100‑1 (MQ=255)
                                                                                                  tcGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATg  <  2:2826012/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
GGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATG  >  NC_000913/4636284‑4636481

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.