New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 734801NA (NA)5 (0.050) 4/168 NT NA pseudogene (669/1521 nt) rhsO pseudogene, Rhs family
?NC_000913 = 734817 NA (NA)pseudogene (685/1521 nt) rhsO pseudogene, Rhs family

Only 100 of 114 total aligned reads displayed.

TGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCG  >  NC_000913/734734‑734915
                                                                                   |                                                                                                  
 gCTGGTGCCGATGCGCGACCGGCTGGAAAGTGTAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAg                                                                                   <  2:69074/100‑1 (MQ=255)
 gCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGTCCTGACGGTGGAg                                                                                   <  2:1925166/100‑1 (MQ=14)
 gCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAg                                                                                   <  2:1535744/100‑1 (MQ=31)
  cTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGc                                                                                  >  2:738837/1‑100 (MQ=32)
   tGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCa                                                                                 <  1:1784735/100‑1 (MQ=32)
    ggTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAg                                                                                >  2:1000952/1‑100 (MQ=32)
    ggTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAg                                                                                <  2:2218869/100‑1 (MQ=32)
    ggTGCAGATGCTCAACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGGGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAg                                                                                >  2:1923095/1‑100 (MQ=12)
     gTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTTGAGCAGa                                                                               <  2:246033/100‑1 (MQ=17)
      tGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGAt                                                                              >  1:402066/1‑100 (MQ=33)
      tGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGAt                                                                              <  1:20073/100‑1 (MQ=33)
      tGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGAt                                                                              <  1:1064644/100‑1 (MQ=33)
      tGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGAt                                                                              >  2:1458682/1‑100 (MQ=32)
       gCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGAGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGa                                                                               >  1:1921744/1‑98 (MQ=17)
         aGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGTCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCa                                                                           <  2:454855/100‑1 (MQ=17)
         aGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCa                                                                           <  2:2985952/100‑1 (MQ=32)
         aGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCa                                                                           >  2:292460/1‑100 (MQ=32)
          gATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCaa                                                                          >  1:171676/1‑100 (MQ=32)
           aTGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCaaa                                                                         <  1:1622691/100‑1 (MQ=33)
             gCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAAc                                                                       >  2:2066085/1‑100 (MQ=33)
               tCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCa                                                                     <  2:1547498/100‑1 (MQ=33)
                cGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAg                                                                    >  2:2282409/1‑100 (MQ=33)
                   acGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCAGCTGGCTGGCAAGGAGCGGCATGACGGTGGAGCAGATGCAAAACCAg                                                                    >  2:2646425/2‑97 (MQ=11)
                    cGGCTGGAAAGTGAAATCCTGGCTGACCGGGGGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATgg                                                                >  1:2172868/1‑100 (MQ=18)
                        tGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGAcc                                                             <  1:518605/99‑1 (MQ=32)
                         ggAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCg                                                           >  2:1295573/1‑100 (MQ=33)
                         ggAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCg                                                           >  1:2183105/1‑100 (MQ=33)
                          gAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCgg                                                          <  2:654245/100‑1 (MQ=33)
                          gAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCgg                                                          <  1:1295582/100‑1 (MQ=33)
                           aaaGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGgt                                                         <  1:2998581/100‑1 (MQ=33)
                            aaGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGgtg                                                        <  2:2986015/100‑1 (MQ=33)
                              gTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTa                                                      >  2:1953667/1‑100 (MQ=33)
                              gTGAAATCCTGGCTGACCGGGTGAGAGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTa                                                      >  2:1935574/1‑100 (MQ=18)
                                gAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTaca                                                    >  2:2578552/1‑100 (MQ=33)
                                gAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTaca                                                    >  2:1888649/1‑100 (MQ=33)
                                gAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTaca                                                    >  1:995657/1‑100 (MQ=33)
                                gAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTaca                                                    <  1:137270/100‑1 (MQ=33)
                                  aaTCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACg                                                  <  2:159870/100‑1 (MQ=32)
                                    tCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGcc                                                <  1:2373006/100‑1 (MQ=33)
                                    atcTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGcc                                                <  1:849910/98‑1 (MQ=18)
                                      cTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCgg                                              >  1:2455714/1‑100 (MQ=33)
                                        ggCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGccagat                                            >  2:849909/1‑96 (MQ=18)
                                        ggCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGgcg                                            >  1:1285441/1‑100 (MQ=33)
                                        ggCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGgcg                                            <  2:775159/100‑1 (MQ=32)
                                         gCTGACCGGGTGAGTGAGGAAAGCCGTCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGgcgc                                           <  1:710178/100‑1 (MQ=18)
                                          cTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGcgcg                                          <  2:2082733/100‑1 (MQ=32)
                                            gACCGGGGGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGaa                                        <  2:1681018/100‑1 (MQ=17)
                                             aCCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGTCATCGTCCGGCATGACGGTGGAGCAGATGCAAAACCAGATGGAGCCGGCGTGTACACCGgctccacc                                       <  2:2183085/100‑7 (MQ=11)
                                             aCCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGaaa                                       >  1:1673797/1‑100 (MQ=33)
                                             aCCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGaaa                                       <  2:1471725/100‑1 (MQ=33)
                                             aCCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGaaa                                       >  1:1427153/1‑100 (MQ=32)
                                              ccGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGaaa                                       >  2:3074452/1‑99 (MQ=32)
                                               cGGGTGCGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGaaaaa                                     >  2:1017467/1‑100 (MQ=17)
                                               cGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGaaaaa                                     >  1:534189/1‑100 (MQ=33)
                                                gggTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAt                                    <  1:2335492/100‑1 (MQ=32)
                                                gggTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAt                                    <  1:1060967/100‑1 (MQ=33)
                                                 ggTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATc                                   >  1:3023364/1‑100 (MQ=33)
                                                  gtgagtgaGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATcc                                  >  1:682540/1‑100 (MQ=33)
                                                    gagtgagGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCAc                                <  1:2968477/100‑1 (MQ=33)
                                                     agtgagGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCAcc                               <  1:1888664/100‑1 (MQ=33)
                                                     agtgagGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCAcc                               >  1:1112143/1‑100 (MQ=33)
                                                     agtgagGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCAcc                               <  2:2256344/100‑1 (MQ=33)
                                                     agtgagGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCAcc                               <  2:826389/100‑1 (MQ=32)
                                                        gagGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGt                            >  2:502016/1‑100 (MQ=32)
                                                        gagGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGt                            >  1:839786/1‑100 (MQ=33)
                                                        gagGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGt                            >  1:782110/1‑100 (MQ=33)
                                                         agGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTa                           >  1:1032517/1‑100 (MQ=33)
                                                         agGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTa                           >  1:7534/1‑100 (MQ=33)
                                                          ggAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTg                             >  2:2383550/1‑97 (MQ=33)
                                                          ggAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTAc                          >  1:1495003/1‑100 (MQ=33)
                                                          ggAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTAc                          >  1:379480/1‑100 (MQ=33)
                                                          ggAAAGCCGCCGCTGGCTGGCAACGTGCGGCCTGACGGTGGAGCTGATGCAAAACCATATTGACCCGGGTTGCACTCTGGCGCGAAAAGTCCACCTTTAc                          >  2:1811155/1‑100 (MQ=11)
                                                           gAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTAcc                         <  1:12114/100‑1 (MQ=32)
                                                           gAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTAcc                         >  2:2758549/1‑100 (MQ=33)
                                                           gAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTAcc                         <  1:3077260/100‑1 (MQ=33)
                                                            aaaGCTGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCa                        >  2:1492478/1‑100 (MQ=17)
                                                             ttccgatctctggctggCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCAc                       <  1:1393301/91‑1 (MQ=255)
                                                             aaGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCAc                       >  1:1195375/1‑100 (MQ=33)
                                                               gccgccGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTg                     >  1:413309/1‑100 (MQ=33)
                                                               gccgccGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTg                     >  1:536280/1‑100 (MQ=33)
                                                               gccgccGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTg                     >  1:878254/1‑100 (MQ=33)
                                                               gccgccGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTg                     >  2:413955/1‑100 (MQ=33)
                                                                ccgccgCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTg                     >  2:2495913/1‑99 (MQ=33)
                                                                ccgccgCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGc                    >  1:1672311/1‑100 (MQ=33)
                                                                ccgccgCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGc                    >  1:1376594/1‑100 (MQ=33)
                                                                   ccgcTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGAc                 <  1:2758577/100‑1 (MQ=33)
                                                                   ccgcTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGAc                 <  2:1195368/100‑1 (MQ=33)
                                                                   ccgcTGGCAGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACAAAAAAAAAAAAAAAATCCACCTGTACCACTGCGAc                 <  2:2398972/100‑1 (MQ=11)
                                                                    cgcTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGCCCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGAcc                <  2:2171316/100‑1 (MQ=17)
                                                                    cgcTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGAcc                >  1:2695447/1‑100 (MQ=33)
                                                                      ctggctggCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCAcagatcggaa              >  2:1393292/1‑91 (MQ=255)
                                                                          ctggcATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATcgcg          >  2:423535/1‑100 (MQ=33)
                                                                          ctggcATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATcgcg          >  2:1206317/1‑100 (MQ=33)
                                                                           tggcATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCgg         <  1:896953/100‑1 (MQ=33)
                                                                            ggcATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGc        >  1:2083406/1‑100 (MQ=33)
                                                                             gcATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGcc       <  2:1469027/100‑1 (MQ=32)
                                                                             gcATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGcc       <  1:1926890/100‑1 (MQ=33)
                                                                              cATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCt      >  1:2746546/1‑100 (MQ=33)
                                                                                  gTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCg  >  1:2508331/1‑100 (MQ=33)
                                                                                  gTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCg  >  1:1056354/1‑100 (MQ=33)
                                                                                   |                                                                                                  
TGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCG  >  NC_000913/734734‑734915

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.