New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 900799NA (NA)7 (0.070) 6/164 NT NA noncoding (51/87 nt) REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 900831 NA (NA)noncoding (83/87 nt) REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 141 total aligned reads displayed.

AAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTCAGCAGGC  >  NC_000913/900732‑900930
                                                                                                   |                                                                                                   
aaGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAC                                                                                                     >  2:2689548‑M2/1‑100 (MQ=255)
aaGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAC                                                                                                     <  1:2880809‑M2/100‑1 (MQ=255)
 aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAcc                                                                                                    >  2:698647/1‑100 (MQ=255)
 aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAcc                                                                                                    <  2:376253/100‑1 (MQ=255)
 aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAcc                                                                                                    >  1:3020924/1‑100 (MQ=255)
    aTTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTAc                                                                                                 <  1:2009278/100‑1 (MQ=255)
    aTTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTAc                                                                                                 >  2:1347714/1‑100 (MQ=255)
    aTTTATGCACTATGTAGCCGGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTGATCAGACCTa                                                                                                  <  2:408443/99‑1 (MQ=255)
      ttATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACaa                                                                                               >  1:1046136/1‑100 (MQ=255)
       tATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACaaa                                                                                              <  2:321909/100‑1 (MQ=255)
       tATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACaaa                                                                                              >  2:2195078/1‑100 (MQ=255)
         tGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc                                                                                            <  1:1099021/100‑1 (MQ=255)
         tGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc                                                                                            >  1:2242249/1‑100 (MQ=255)
         tGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc                                                                                            <  1:2579670/100‑1 (MQ=255)
           naCTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccc                                                                                          >  2:1522957/2‑100 (MQ=255)
            aCTATGTAGTCCGGATAAGGCGTCCCCGCCGCATCAGGCACAGGCACCATGCTTATGTCTGATGCGACGCTGGCCCGTCTTATCAGACCTACAAAAc                                                                                            >  2:209113/1‑97 (MQ=37)
                 gTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGc                                                                                    <  1:1270247/100‑1 (MQ=255)
                  tAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCg                                                                                   >  1:2657778/1‑100 (MQ=255)
                    ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa                                                                                 <  1:923675/100‑1 (MQ=255)
                    ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa                                                                                 <  2:865687/100‑1 (MQ=255)
                    ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa                                                                                 <  1:1409260/100‑1 (MQ=255)
                     gccggatgcggcggggacgccttatccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGACGAAt                                                                                >  1:378925‑M2/31‑100 (MQ=255)
                      CCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATg                                                                               <  2:404504‑M1/100‑1 (MQ=255)
                      CCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATg                                                                               >  2:49989‑M1/1‑100 (MQ=255)
                       CGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGt                                                                              <  2:441263‑M1/100‑1 (MQ=255)
                          aTAAGGCGTCCCCGCCGCATCCGGCACAGGAACAGTGTTGATGTCTGATGCGACGCTGGTGCGTCTTCTCAGTCTTACAACACCCCCCGGCGAATGTACg                                                                           <  2:1812629/100‑1 (MQ=37)
                          ATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACg                                                                           <  2:1048592‑M1/100‑1 (MQ=255)
                            aaGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCa                                                                         <  2:1251481/100‑1 (MQ=255)
                             aGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAg                                                                        <  1:581885/100‑1 (MQ=255)
                                cGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCca                                                                     >  1:2027877/1‑100 (MQ=255)
                                cGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCca                                                                     <  2:2902474/100‑1 (MQ=255)
                                  tCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCcaca                                                                   <  1:288424/100‑1 (MQ=255)
                                   ccccGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACAt                                                                  >  1:171350/1‑100 (MQ=255)
                                   ccacgccgcATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACAt                                                                  >  2:458386/4‑100 (MQ=255)
                                    agcgtcgcATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTGTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACAtt                                                                 >  2:3054068/6‑100 (MQ=255)
                                           cATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCg                                                          <  2:834446/100‑1 (MQ=255)
                                           cATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCg                                                          <  2:1706045/100‑1 (MQ=255)
                                            atccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCg                                                          <  2:1529353‑M2/92‑1 (MQ=255)
                                              ccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCg                                                       >  2:1275556‑M2/6‑100 (MQ=255)
                                                  cACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCg                                                   <  2:2668171‑M2/99‑1 (MQ=255)
                                                    caGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGaa                                                 >  2:2791311/1‑100 (MQ=255)
                                                      ggCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacata                                               <  1:381158‑M2/100‑55 (MQ=255)
                                                      ggCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATg                                               >  2:1336936/1‑100 (MQ=255)
                                                          ccGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAg                                           <  1:2200905/100‑1 (MQ=255)
                                                          ccGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAg                                           <  1:1621086/100‑1 (MQ=255)
                                                            gTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACatcagcacggtgcctgtgccggatgcggaggggacgccttatccggcctacatagtgcat                                         <  2:2952056‑M2/100‑61 (MQ=255)
                                                              gCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCt                                       >  2:2551544/1‑100 (MQ=255)
                                                              gCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCt                                       >  2:1152938/1‑100 (MQ=255)
                                                              gCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCt                                       >  2:1836900/1‑100 (MQ=255)
                                                               cTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCtt                                      <  1:296848/100‑1 (MQ=255)
                                                                taaaatctgatGCGACGCTGGCGCGTCTTATCAGACatcagcacggtgcctgtgggggatgcggcggggaggccttatccggcctacatagttaataaa                                      <  2:727862‑M2/94‑64 (MQ=255)
                                                                tGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaat                                     <  2:1603678‑M2/100‑65 (MQ=255)
                                                                 gATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTg                                    >  1:2531023/1‑100 (MQ=255)
                                                                 gATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTg                                    >  1:2877224/1‑100 (MQ=255)
                                                                  aTGTCTGATGCGACGCTGGCGCGTCTTATCAGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaattc                                   <  1:757857‑M2/100‑67 (MQ=255)
                                                                  aTGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTgc                                   <  1:2134040/100‑1 (MQ=255)
                                                                   tGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTgcg                                  <  2:1668136/100‑1 (MQ=255)
                                                                   tGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTgcg                                  <  1:2840529/100‑1 (MQ=255)
                                                                    gTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTgcgc                                 >  2:1260826/1‑100 (MQ=255)
                                                                    gTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTgcgc                                 <  2:2498892/100‑1 (MQ=255)
                                                                     tCTGATGCGACGCTGGCGCGTC‑‑‑‑‑AGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaattcttataatg                           <  1:2632012‑M2/100‑75 (MQ=255)
                                                                      cTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTc                               >  2:3054473/1‑100 (MQ=255)
                                                                       tGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCg                              <  2:2300944/100‑1 (MQ=255)
                                                                        gATGCGACGCTGGCGCGTCTTATCAGACCTACAAAATCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGa                             >  1:2198487/1‑100 (MQ=255)
                                                                        gATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGa                             >  1:739497/1‑100 (MQ=255)
                                                                        gATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGa                             <  1:416139/100‑1 (MQ=255)
                                                                         aTGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGAt                            <  1:1454006/100‑1 (MQ=255)
                                                                          tGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATc                           <  1:1984436/100‑1 (MQ=255)
                                                                           gCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCa                          >  1:2671953/1‑100 (MQ=255)
                                                                            cGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAg                         <  1:902463/100‑1 (MQ=255)
                                                                            cGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCGTTGCGCTCGATCAg                         >  1:1397585/1‑100 (MQ=255)
                                                                              aCGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGAc                       <  2:1998671/100‑1 (MQ=255)
                                                                               cGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACg                      <  2:245859/100‑1 (MQ=255)
                                                                                 cTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGca                    <  2:1591894/100‑1 (MQ=255)
                                                                                   ggCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGcatc                  <  2:2333856/100‑1 (MQ=255)
                                                                                    gcgcGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGcatca                 <  1:1243246/100‑1 (MQ=255)
                                                                                       cgTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCAtcatca              <  1:1152944/100‑1 (MQ=255)
                                                                                          cTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCGCATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCg           <  2:1148322/100‑1 (MQ=255)
                                                                                           ttATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGt          >  2:2213337/1‑100 (MQ=255)
                                                                                           ttATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGt          >  1:1553305/1‑100 (MQ=255)
                                                                                           ttATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGt          >  1:978696/1‑100 (MQ=255)
                                                                                            tATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTc         >  2:558198/1‑100 (MQ=255)
                                                                                            tATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTc         <  1:3090030/100‑1 (MQ=255)
                                                                                             aTCAGACatcagcacggtgcctgtgccggatccggcggggacgccttatccggcctacatactgcataaattctactaatgaagacggacaacccac           <  2:712492‑M2/97‑91 (MQ=255)
                                                                                              tCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTcag       <  1:1394352/100‑1 (MQ=255)
                                                                                               cAGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaattcttataatgaagacggacaacccactaagt      >  1:1445386‑M2/1‑5 (MQ=255)
                                                                                               cAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTcagc      <  1:510137/100‑1 (MQ=255)
                                                                                               cAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTcagc      >  1:970393/1‑100 (MQ=255)
                                                                                                aGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTcagca     <  1:2721010/100‑1 (MQ=255)
                                                                                                 gACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaattcttataatgaagacggacaacccactaagttg    >  2:1614908‑M2/1‑3 (MQ=255)
                                                                                                 gACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaattcttataatgaagacggacaacccactaagttg    <  1:2489845‑M2/100‑98 (MQ=255)
                                                                                                 gACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTcagcag    >  1:486858/1‑100 (MQ=255)
                                                                                                 gACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTcagcag    >  2:799032/1‑100 (MQ=255)
                                                                                                  aCCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTCAGCAgg   <  1:594785/100‑1 (MQ=255)
                                                                                                   ccTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTCAGCAGGc  >  2:2236384/1‑100 (MQ=255)
                                                                                                   ccTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTCAGCAGGc  >  1:198802/1‑100 (MQ=255)
                                                                                                   ccTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTCAGCAGGc  >  2:1593097/1‑100 (MQ=255)
                                                                                                   ccTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTCAGCAGGc  >  1:2669564/1‑100 (MQ=255)
                                                                                                   ccTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTCAGCAGGc  <  1:2352397/100‑1 (MQ=255)
                                                                                                   catcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaattcttataatgaagacggacaacccactaagttgtc  <  1:842472‑M2/100‑100 (MQ=255)
                                                                                                   |                                                                                                   
AAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTCAGCAGGC  >  NC_000913/900732‑900930

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.