New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1534883 =NA (NA)7 (0.070) 6/162 NT NA noncoding (1/75 nt) REP118 (repetitive extragenic palindromic) element; contains 2 REP sequences REP118 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 1534913 = NA (NA)noncoding (31/75 nt) REP118 (repetitive extragenic palindromic) element; contains 2 REP sequences REP118 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 142 total aligned reads displayed.

ATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCACCGCTGT  >  NC_000913/1534814‑1535009
                                                                                                   |                                                                                                
gggcaattgaactctgaaaccgttgtctgatgcgcttcgcctgtcaggtctacaaccgggctaatgtatGCCGGATGCGGCGTAAACGCCTTATCCGGCa                                                                                                  >  1:1264888‑M1/70‑100 (MQ=255)
 tGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCAt                                                                                                 >  1:11643/1‑100 (MQ=255)
 ggcaattgaactctgaaaccgttgtctgatgcgcttcgcctggcaggtctacaaccgggctaatgtatGCCGGATGCGGCGTAAACGCCTTATCCGGCAt                                                                                                 >  2:890686‑M1/69‑100 (MQ=255)
  gAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATAAGGCGTTTACGCCGCATCCGGCaac                                                                                                <  1:1117386/100‑3 (MQ=25)
   aGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATAc                                                                                               <  2:1188796/100‑1 (MQ=255)
   aGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATAc                                                                                               >  1:2638758/1‑100 (MQ=255)
    gTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGTGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACa                                                                                              >  1:2647781/1‑100 (MQ=255)
    gTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACa                                                                                              >  1:810619/1‑100 (MQ=255)
    gTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGGTGACGGATGAGGCGTAAACGCCTTATGCGGCATa                                                                                                >  1:2960832/1‑98 (MQ=39)
        gcgcTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTan                                                                                          <  2:228442/100‑2 (MQ=255)
        gcgcTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAg                                                                                          <  1:2168129/100‑1 (MQ=255)
          gcTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTACACGCCTTATCCGGCATACATTAGcc                                                                                        >  2:1614400/1‑100 (MQ=255)
                gATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCCGGTTGCCGGGTGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTg                                                                                  <  2:2166839/100‑1 (MQ=255)
                 aTGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGt                                                                                 >  1:2352606/1‑100 (MQ=255)
                  tGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTa                                                                                <  1:3023440/100‑1 (MQ=255)
                   ggcggcGTTTGATACGCACCCGGATGCGGGAAAATAATTTATGTCAGGTCGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAg                                                                               <  2:2886295/100‑1 (MQ=255)
                   ggcggcGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAg                                                                               <  2:701937/100‑1 (MQ=255)
                    gcggcgTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAg                                                                               <  2:1504753/99‑1 (MQ=255)
                    gcggcgTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGa                                                                              >  1:321793/1‑100 (MQ=255)
                     cggcgTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGAc                                                                             >  2:2557832/1‑100 (MQ=255)
                     cggcgTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGAc                                                                             >  1:2792799/1‑100 (MQ=255)
                      ggctTTTGATACGCACCCGGAGGAGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGAcc                                                                            <  2:528451/100‑1 (MQ=255)
                      ggcgTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGAcc                                                                            <  2:2470716/100‑1 (MQ=255)
                       gcgTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCt                                                                           >  2:852754/1‑100 (MQ=255)
                             gATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAgg                                                                     <  2:500876/100‑1 (MQ=255)
                              aTACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGc                                                                    <  2:2675641/100‑1 (MQ=255)
                               tACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCg                                                                   <  2:2994336/100‑1 (MQ=255)
                                aCGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCg                                                                   <  2:2994231/99‑1 (MQ=255)
                                aCGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGa                                                                  <  1:1684893/100‑1 (MQ=255)
                                 cGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCgta                                                                 >  1:80558/1‑98 (MQ=255)
                                  gCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAg                                                                <  2:2372318/100‑1 (MQ=255)
                                      ccGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGACCGGTTGTCGAACTGAAAGGAGAAggcca                                                            >  1:2822663/1‑96 (MQ=37)
                                       cGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCAt                                                           <  2:2026270/100‑1 (MQ=255)
                                        ggAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAg                                                                <  2:80556/94‑1 (MQ=255)
                                        ggAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATc                                                          <  2:10215/100‑1 (MQ=255)
                                        ggAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATc                                                          >  1:2263419/1‑100 (MQ=255)
                                        ggAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGATGTAGACCTGACAGGCGAAGCGCATc                                                          >  1:2268036/1‑100 (MQ=255)
                                            gCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGAc                                                      <  2:3092012/100‑1 (MQ=255)
                                            gCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGAc                                                      <  1:517301/100‑1 (MQ=255)
                                                gAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACg                                                  >  2:2608597/1‑100 (MQ=255)
                                                gAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACg                                                  >  1:2428769/1‑100 (MQ=255)
                                                  aaaTAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACgg                                                 >  2:2141555/1‑99 (MQ=255)
                                                  aaaTAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGt                                                >  1:1365682/1‑100 (MQ=255)
                                                  aaaTAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGt                                                <  1:1729753/100‑1 (MQ=255)
                                                  aaaTAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGt                                                <  1:682155/100‑1 (MQ=255)
                                                   aataatTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGtt                                               >  2:1807613/1‑100 (MQ=255)
                                                    ataatTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGttt                                              <  2:2647753/100‑1 (MQ=255)
                                                    ataatTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGttt                                              <  1:1390177/100‑1 (MQ=255)
                                                     taatTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTc                                             <  2:703111/100‑1 (MQ=255)
                                                      aatTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCa                                            <  1:2404129/100‑1 (MQ=255)
                                                       atTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCag                                           <  1:2805308/100‑1 (MQ=255)
                                                       atTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCag                                           <  1:2608623/100‑1 (MQ=255)
                                                         ttATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCagan                                         <  1:2649180/100‑2 (MQ=255)
                                                            tGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTc                                      <  2:1192957/100‑1 (MQ=255)
                                                             gTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCa                                     >  2:1254697/1‑100 (MQ=255)
                                                              aatgtatgccggataaggcgtttacgccgcatccggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCaa                                    >  2:200914‑M2/38‑100 (MQ=255)
                                                               cAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAAt                                   <  2:1360514/100‑1 (MQ=255)
                                                                aGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAAtt                                  >  1:1600813/1‑100 (MQ=255)
                                                                 ggTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTg                                 <  1:1030574/100‑1 (MQ=255)
                                                                  gTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATATATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAAtt                                  >  2:622120/1‑98 (MQ=255)
                                                                  gTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGc                                <  1:545575/100‑1 (MQ=255)
                                                                   ttGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGcc                               <  1:1130945/100‑1 (MQ=255)
                                                                   ttGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGcc                               <  2:2567891/100‑1 (MQ=255)
                                                                   atgccggataaggcgtttacgccgcatccggcATACATTAGCCCGGTTGTAGACCTGCCAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGcc                               >  2:890686‑M2/33‑100 (MQ=255)
                                                                    tgccggataaggcgtttacgccgcatccggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGccc                              >  1:1264888‑M2/32‑100 (MQ=255)
                                                                     GCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCa                             <  1:2253430‑M1/100‑1 (MQ=255)
                                                                     GCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCa                             >  2:3073177‑M1/1‑100 (MQ=255)
                                                                     GCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCa                             <  1:145936‑M1/100‑1 (MQ=255)
                                                                       cggataaggcgtttacgccacatccggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCAtt                           >  1:390091‑M2/29‑100 (MQ=255)
                                                                        ggataaggcgtttacgccgcatccggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTc                          >  1:1729807‑M2/28‑100 (MQ=255)
                                                                         GATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCg                         >  2:321791‑M1/1‑100 (MQ=255)
                                                                          ATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCgg                        >  1:2003936‑M1/1‑100 (MQ=255)
                                                                           TGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGc                       >  1:1715432‑M1/1‑100 (MQ=255)
                                                                            aaggcgtttacgccgcatccggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCa                      <  2:1729792‑M2/77‑1 (MQ=255)
                                                                             cggcgTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACACCGGTTTCAGAGTTCAATTGCCCATTCGGCAt                     >  2:2477277/1‑100 (MQ=255)
                                                                             cggcgTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCAt                     <  2:1008089/100‑1 (MQ=255)
                                                                             cggcgTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCAt                     >  2:1046099/1‑100 (MQ=255)
                                                                             cggcgTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCAt                     >  2:287732/1‑100 (MQ=255)
                                                                               gcgTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGa                   >  2:1087630/1‑100 (MQ=255)
                                                                                cgTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGaa                  >  1:1783145/1‑100 (MQ=255)
                                                                                   aaaCGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACa               >  1:1321003/1‑100 (MQ=255)
                                                                                    aaCGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACaa              >  2:2447986/1‑100 (MQ=255)
                                                                                     aCGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACaaa             <  1:2157983/100‑1 (MQ=255)
                                                                                     aCGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACaa              >  2:1724400/1‑99 (MQ=255)
                                                                                      cGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACaaaa            >  1:495608/1‑100 (MQ=255)
                                                                                       gCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACaaaa            <  2:2760490/99‑1 (MQ=255)
                                                                                       gCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAAt           <  1:706251/100‑1 (MQ=255)
                                                                                        ccTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATc          >  2:682514/1‑100 (MQ=255)
                                                                                        ccTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATc          >  1:1343911/1‑100 (MQ=255)
                                                                                        ccTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATc          >  1:1220658/1‑100 (MQ=255)
                                                                                          ttATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCa         >  2:512370/1‑99 (MQ=255)
                                                                                          ttATCCGGAATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTGTCAGAGTTCAATTGCGCAATCGGCATGAAACaaaa            <  2:1433186/96‑1 (MQ=255)
                                                                                           tATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCAcc       <  1:2050620/100‑1 (MQ=255)
                                                                                             tccggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCCCAGTTCAATTGCCCATTCGGCATGAAACAAAATCACCGc     >  2:2483364‑M2/7‑100 (MQ=255)
                                                                                              ccggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCACCGCt    >  1:2748979‑M2/6‑100 (MQ=255)
                                                                                              ccggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCACCGCt    <  2:2402012‑M2/95‑1 (MQ=255)
                                                                                              ccggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTATCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCACCGCt    >  2:1070986‑M2/6‑100 (MQ=255)
                                                                                               cggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCACCGCtg   >  1:1646611‑M2/5‑100 (MQ=255)
                                                                                               cggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCACCGCtg   <  1:1254706‑M2/96‑1 (MQ=255)
                                                                                                ggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCACCGCtgt  >  1:2851634‑M2/4‑100 (MQ=255)
                                                                                                   |                                                                                                
ATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCACCGCTGT  >  NC_000913/1534814‑1535009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.