| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,705,970 | G→A | 20.3% | intergenic (‑180/+128) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,705,970 | 0 | G | A | 20.3% | 351.0 / 72.4 | 147 | intergenic (‑180/+128) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base G (59/58); new base A (28/2); total (87/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.00e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.96e-01 | |||||||||||
Only 100 of 155 total aligned reads displayed.
CAGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCC > NC_000913/3705871‑3706069 | cAGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATg > 1:446122/1‑100 (MQ=255)cAGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATg > 1:3006212/1‑100 (MQ=255) nggAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcg > 1:1755343/2‑100 (MQ=255) ggAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcgg < 2:2688047/100‑1 (MQ=255) aTGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGt < 2:2853235/100‑1 (MQ=255) tGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGtt > 1:415494/1‑100 (MQ=255) tGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGtt > 1:733137/1‑100 (MQ=255) aGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAAc < 1:2370357/100‑1 (MQ=255) aGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAAc > 2:2911423/1‑100 (MQ=255) aGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAAc > 1:388361/1‑100 (MQ=255) gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa < 1:1498460/100‑1 (MQ=255) gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa < 2:2825340/100‑1 (MQ=255) tgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATc > 1:696283/1‑100 (MQ=255) tgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATc < 2:566474/100‑1 (MQ=255) tgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATc > 2:115415/1‑100 (MQ=255) tgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATc > 2:2136119/1‑100 (MQ=255) cGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCgg < 1:766363/100‑1 (MQ=255) ggATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGc < 1:2622439/100‑1 (MQ=255) aTGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCt < 2:2245566/100‑1 (MQ=255) aTGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGcat < 1:491928/100‑3 (MQ=37) gcgcTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑a > 1:926053/1‑100 (MQ=255) gcTTCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGAATGCGGCGTTAACGCCTTATCCGGCCTAC‑aaa < 2:724490/100‑1 (MQ=255) cTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑aaaa > 1:2132347/1‑100 (MQ=255) tGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAAt < 2:1324200/100‑1 (MQ=255) gCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATc > 1:1004754/1‑100 (MQ=255) cGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTg > 2:1457113/1‑100 (MQ=255) cGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTg > 1:550044/1‑100 (MQ=255) cGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTg > 2:1334618/1‑100 (MQ=255) gCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGTCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGc < 2:1370391/100‑1 (MQ=255) agGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAAt < 1:2757140/100‑1 (MQ=255) ggCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAAtt > 1:1995156/1‑100 (MQ=255) gCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTc < 1:2828116/100‑1 (MQ=255) cacaGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCa > 1:556115/1‑100 (MQ=255) cacaGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCa > 2:2913057/1‑100 (MQ=255) gcaGCGCCATCCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCa < 2:2222331/99‑1 (MQ=255) caGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAAt > 1:1326615/1‑100 (MQ=255) aGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATa < 2:93137/100‑1 (MQ=255) gcgcCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATa < 2:781815/99‑1 (MQ=255) gcgcCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATAc > 1:2709870/1‑100 (MQ=255) gcCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCGTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACAt > 2:2413418/1‑100 (MQ=255) ccA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACAtt < 1:147234/100‑1 (MQ=255) cA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTg < 1:672864/100‑1 (MQ=255) ccGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCa < 2:550042/100‑1 (MQ=255) cGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑g > 1:2685563/1‑100 (MQ=255) gggTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑Ga < 2:3058533/100‑1 (MQ=255) gggTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑Ga < 1:1142772/100‑1 (MQ=255) gTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑At < 2:2373464/100‑1 (MQ=255) aCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTc < 2:1673182/100‑1 (MQ=255) aGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGt > 2:829813/1‑100 (MQ=255) gATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTa < 1:1548094/100‑1 (MQ=255) gATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTa < 1:2061772/100‑1 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑At‑tt > 2:2555142/1‑91 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGcc > 2:882370/1‑100 (MQ=255) tgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCGTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCt > 2:767657/1‑99 (MQ=255) tgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTg > 2:1876444/1‑100 (MQ=255) tgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTg > 1:2236491/1‑100 (MQ=255) tgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCGTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GT‑AT‑TTTCGTAGGCCt > 2:1258312/1‑99 (MQ=255) gccAAAGTGCGCTTCGTTTATGCCGGATGCGGAGTTAACGCCTTATCGGGCCCGC‑AAAATCGTGCCAGTTCCTTCCATTGCA‑GC‑CT‑TTTCATCGGcc > 2:2754636/3‑97 (MQ=9) aCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGAt > 2:1932048/1‑100 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATa < 1:2084976/100‑1 (MQ=255) aaGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAg > 1:791691/1‑100 (MQ=255) aGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGc < 2:2667032/100‑1 (MQ=255) tGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCgg < 1:2861921/100‑1 (MQ=255) cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAg > 2:2482128/1‑100 (MQ=255) cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAg < 1:2396036/100‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAgcg < 2:116488/100‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAgcg > 2:2401238/1‑100 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAgcg < 2:658154/100‑1 (MQ=255) cttttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑TCACGTAGGCCTGATAAGCGTAgcgc > 1:701714/10‑100 (MQ=17) tttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑TCACGTAGGCCTGATAAGCGTAGCGCAt > 1:114102/8‑100 (MQ=17) cttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCATAC‑AAGTTCGTGCAAATTCAATAAATTGCA‑‑A‑TA‑TGACGTAGGCCTGATAAGCGTAGCGCATc > 1:471439/8‑100 (MQ=18) ttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GA‑ATCCCTTGTAGGCCTGATAAGCGTAGCGCATCa > 1:703553/7‑100 (MQ=18) ttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GG‑AC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATc > 1:596718/7‑100 (MQ=18) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATc < 2:2253477/100‑1 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAg < 1:895449/100‑1 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAg < 2:2419844/100‑1 (MQ=255) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GT‑TT‑ATTGGTAGGCCTGATAAGCGCAGCGCATCAg > 1:538435/5‑100 (MQ=21) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCA‑GG‑AG‑CTGCGTAGGCCTGATAAGCGTAGCGCATCAg > 1:1050866/5‑100 (MQ=17) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACCTGCAAATTCAATATATTGCA‑GG‑AT‑ACGTGTAGGCCTGATAAGCGTAGCGCATCAg > 1:1975596/5‑100 (MQ=18) gtaggCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAg > 2:705336/5‑100 (MQ=18) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCGTGCAAATTCAATACATTGCA‑TG‑GG‑CCATGTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:1996690/3‑100 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑CCTCGTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:3028515/3‑100 (MQ=21) aggCCGGATAAGGCGTTAACGCCGCATCCGGCATAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCAGAACGCATCa > 1:1765018/3‑97 (MQ=17) aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGc < 1:2919397/100‑1 (MQ=255) tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCa < 1:2658495/100‑1 (MQ=255) tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGACTGATAAGCGGAGCGCATCAAGCa > 2:1884736/1‑100 (MQ=255) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑TCACGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:50535/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCATGAAAATTCAATACATTGCA‑AG‑AT‑TTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:833803/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGCA‑AT‑CT‑CCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:2478660/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGCAGGG‑AC‑TAT‑GTAGGCCTGATAAGCATAGCGCATCAGGCa > 1:2474904/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGCA‑GAGAT‑TAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:1845318/2‑100 (MQ=17) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 2:62791/1‑100 (MQ=255) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 2:1271822/1‑100 (MQ=255) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑TCACGTAGGCCTGATAAGCGTAGCGCATCAGGCag > 2:536358/1‑99 (MQ=17) gCCGGATAAGGCGTTCACTCCGCATCCGGCCTAC‑AAAAGCACGCAAATTCAATATATTGCA‑GA‑GA‑TTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 2:2520172/1‑99 (MQ=14) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GG‑AC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag > 1:1727568/1‑99 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GT‑TT‑ATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCaa > 1:1248746/1‑99 (MQ=25) ccGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGccta < 2:503303/100‑4 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:1431348/100‑1 (MQ=255) gcggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc < 1:3106281/100‑1 (MQ=255) | CAGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCC > NC_000913/3705871‑3706069 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |