| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,705,985 | T→C | 25.6% | intergenic (‑195/+113) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,705,985 | 0 | T | C | 25.6% | 324.3 / 116.8 | 168 | intergenic (‑195/+113) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base T (62/63); new base C (41/2); total (103/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.35e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.59e-01 | |||||||||||
Only 100 of 169 total aligned reads displayed.
GCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTT > NC_000913/3705887‑3706084 | gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa > 2:2002788/1‑100 (MQ=255)gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa < 1:1498460/100‑1 (MQ=255) tgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATc > 2:2136119/1‑100 (MQ=255) tgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATc > 1:696283/1‑100 (MQ=255) tgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATc < 2:566474/100‑1 (MQ=255) ccGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCg < 1:2852104/100‑1 (MQ=255) cGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCgg < 1:766363/100‑1 (MQ=255) ggATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGc < 1:2622439/100‑1 (MQ=255) gATGGCGCTGCACGCAGAGGCACAGCGTCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGcc < 2:2517275/100‑1 (MQ=255) gATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGcc < 2:180362/100‑1 (MQ=255) gATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGca < 1:999751/100‑2 (MQ=37) aTGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCt < 2:2245566/100‑1 (MQ=255) gcgcTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑a < 1:496771/100‑1 (MQ=255) cgcTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑aa > 1:273572/1‑100 (MQ=255) gcTTCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGAATGCGGCGTTAACGCCTTATCCGGCCTAC‑aaa < 2:724490/100‑1 (MQ=255) gcTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑aaa > 2:1431338/1‑100 (MQ=255) cTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑aaaa > 1:2132347/1‑100 (MQ=255) gCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATc > 1:1004754/1‑100 (MQ=255) cGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTg > 1:550044/1‑100 (MQ=255) cGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTg > 2:1334618/1‑100 (MQ=255) gCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGTCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGc < 2:1370391/100‑1 (MQ=255) gagGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCaaa > 1:40829/1‑100 (MQ=255) gagGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCGTTGTTTATGCCGGATACGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCaaa > 2:2998643/1‑100 (MQ=255) ggCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAAtt > 1:1995156/1‑100 (MQ=255) gCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTc < 1:2828116/100‑1 (MQ=255) cacaGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCa > 2:269383/1‑100 (MQ=255) cacaGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCa > 2:2913057/1‑100 (MQ=255) gcaGCGCCATCCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCa < 2:2222331/99‑1 (MQ=255) aGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATa < 2:93137/100‑1 (MQ=255) gcgcCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATAc < 1:2661750/100‑1 (MQ=255) gcgcCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATAc > 1:2709870/1‑100 (MQ=255) gcgcCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATAc > 1:2862786/1‑100 (MQ=255) gcCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCGTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACAt > 2:2413418/1‑100 (MQ=255) ccA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACAtt < 1:147234/100‑1 (MQ=255) cA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTg < 1:672864/100‑1 (MQ=255) cGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑g > 1:2685563/1‑100 (MQ=255) gggTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑Ga < 2:3058533/100‑1 (MQ=255) gTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑At < 2:2373464/100‑1 (MQ=255) tataCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑At‑t > 1:1843147/1‑100 (MQ=255) aGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGt > 2:829813/1‑100 (MQ=255) gATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTa < 1:2061772/100‑1 (MQ=255) ttgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GC‑AT‑TTTTGTAgg > 1:1179582/1‑100 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑At‑tt > 2:2555142/1‑91 (MQ=255) tgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCGTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCt > 2:767657/1‑99 (MQ=255) tgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTg > 2:1876444/1‑100 (MQ=255) tgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTg > 1:2236491/1‑100 (MQ=255) tgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCGTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GT‑AT‑TTTCGTAGGCCt > 2:1258312/1‑99 (MQ=255) gccAAAGTGCGCTTCGTTTATGCCGGATGCGGAGTTAACGCCTTATCGGGCCCGC‑AAAATCGTGCCAGTTCCTTCCATTGCA‑GC‑CT‑TTTCATCGGcc > 2:2754636/3‑97 (MQ=9) aCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGAt > 2:1932048/1‑100 (MQ=255) cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAg < 1:2396036/100‑1 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAgc < 2:791689/100‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAgcg < 2:116488/100‑1 (MQ=255) tttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAgcgc > 2:566416/1‑100 (MQ=255) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCa < 1:2076635/100‑1 (MQ=255) tttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑TCACGTAGGCCTGATAAGCGTAGCGCAt > 1:114102/8‑100 (MQ=17) cttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCATAC‑AAGTTCGTGCAAATTCAATAAATTGCA‑‑A‑TA‑TGACGTAGGCCTGATAAGCGTAGCGCATc > 1:471439/8‑100 (MQ=18) ttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GA‑ATCCCTTGTAGGCCTGATAAGCGTAGCGCATCa > 1:703553/7‑100 (MQ=18) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATc < 2:2253477/100‑1 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAg < 2:2419844/100‑1 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAg < 1:895449/100‑1 (MQ=255) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GT‑TT‑ATTGGTAGGCCTGATAAGCGCAGCGCATCAg > 1:538435/5‑100 (MQ=21) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑CCTCGTAGGCCTGATAAGCGTAGCGCATCAg > 2:2800360/5‑100 (MQ=21) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCA‑GG‑AG‑CTGCGTAGGCCTGATAAGCGTAGCGCATCAg > 1:1050866/5‑100 (MQ=17) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACCTGCAAATTCAATATATTGCA‑GG‑AT‑ACGTGTAGGCCTGATAAGCGTAGCGCATCAg > 1:1975596/5‑100 (MQ=18) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGCA‑GA‑GA‑TTATGTAGGCCTGATAAGCGTAGCGCATCAg > 2:1903096/5‑100 (MQ=17) gtaggCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAg > 2:705336/5‑100 (MQ=18) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAgg > 2:322928/1‑100 (MQ=255) aggCCGGATAAGGCGTTAACGCCGCATCCGGCATAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCAGAACGCATCa > 1:1765018/3‑97 (MQ=17) aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGc > 1:702360/1‑100 (MQ=255) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑TCACGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:50535/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCATGAAAATTCAATACATTGCA‑AG‑AT‑TTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:833803/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGCA‑AT‑CT‑CCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:2478660/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGCAGGG‑AC‑TAT‑GTAGGCCTGATAAGCATAGCGCATCAGGCa > 1:2474904/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGCA‑GAGAT‑TAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:1845318/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCA‑GG‑AG‑TTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAt > 1:2289011/2‑100 (MQ=21) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 2:62791/1‑100 (MQ=255) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 2:1271822/1‑100 (MQ=255) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:1588256/1‑100 (MQ=255) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑TCACGTAGGCCTGATAAGCGTAGCGCATCAGGCag > 2:536358/1‑99 (MQ=17) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GT‑TT‑ATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCaa > 1:1248746/1‑99 (MQ=25) ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑CCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCaat > 2:1002304/9‑98 (MQ=21) ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAGCACGCAAACTCAATATATTGCA‑GAGAT‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaat > 2:2864190/9‑98 (MQ=17) ccGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGccta < 2:503303/100‑4 (MQ=255) ggataaggcgTTTACGCCGCATCCGGCCTAC‑ACATTC‑TGCAAATTCAACAAATTGC‑‑GA‑ATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAtttgc > 1:2944336/7‑98 (MQ=18) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAACAGTGCAAATTCAATATATTGCA‑AT‑CT‑TCTGGTAGGCCTGATAAGCATCGCGCATCAGGCaagct > 2:2666410/7‑96 (MQ=21) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:1431348/100‑1 (MQ=255) taaggcgTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GG‑AC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAGTtttgc > 1:1566176/4‑100 (MQ=18) taaggcgTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GT‑TT‑ATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCaatcttac > 2:1281967/4‑93 (MQ=25) tGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgc > 1:571194/1‑100 (MQ=255) gcggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc > 1:818485/1‑100 (MQ=255) cggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct > 2:2467307/1‑100 (MQ=255) aggcgTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGCA‑GG‑GA‑CTATGTAGGCCTGATAAGCATAGCGCATCAGGCagctttacgt > 1:1349939/2‑91 (MQ=21) cgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttn < 2:1755328/100‑2 (MQ=255) cgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg < 1:570961/100‑1 (MQ=255) gTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgc < 1:322930/100‑1 (MQ=255) cGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGTCTTTGCCATc > 2:2061358/1‑99 (MQ=255) gCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg > 2:89427/1‑100 (MQ=255) ccTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCAtagat > 1:3072196/1‑96 (MQ=255) cTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTc < 2:1476792/100‑1 (MQ=255) tATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCtt < 1:2946207/100‑1 (MQ=255) | GCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCA‑CCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTT > NC_000913/3705887‑3706084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |