| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,248,432 | (G)5→6 | coding (660/663 nt) | yqjA → | general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,248,427 | 1 | . | G | 99.3% | 531.4 / ‑2.8 | 143 | coding (655/663 nt) | yqjA | general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base G (85/57); total (85/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
Only 100 of 153 total aligned reads displayed.
GACCAGCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTG > NC_000913/3248328‑3248521 | gACCAGCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATc < 1:235193/100‑1 (MQ=255) aCCAGCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑g > 2:3016546/1‑100 (MQ=255) aacTGATGTCATGACTGATGCTGCTCCCGGTAGTGCTGCTGGGGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gggg > 1:2610326/3‑100 (MQ=255) aGCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gggg < 1:1536499/100‑1 (MQ=255) aGCTGATGTCATGCCTGATGCAGCTCCCGGTGGTGCTGCTGGTGGTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gggg < 1:178967/100‑1 (MQ=255) gCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATAGGGAAATC‑ggggg < 1:2535088/100‑1 (MQ=255) gTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGACTGGCAGGTTCTCTGGTCGTGTTATGAAAAAAGAAATATGGAAATCGGGGGGTAAgg < 2:112407/100‑1 (MQ=255) tCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAggg < 1:1338336/100‑1 (MQ=255) tCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAggg > 2:272544/1‑100 (MQ=255) cATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGa > 2:3786163/1‑100 (MQ=255) cATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGa > 2:119558/1‑100 (MQ=255) aTGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTGTGGCCTGGCAGGTGCTCTGGTCGTGTTATTGAAAAAGAAATATGGAAATCGGGGGGTAAggg < 2:949291/98‑1 (MQ=255) tGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATg < 2:2450754/100‑1 (MQ=255) gCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGc > 1:435569/1‑100 (MQ=255) ccTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCa > 2:2854496/1‑100 (MQ=255) ccTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCa < 1:74422/100‑1 (MQ=255) ccTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCa > 2:958990/1‑100 (MQ=255) tGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCaaa > 2:3841376/1‑100 (MQ=255) gATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAAt > 2:983025/1‑100 (MQ=255) aTGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATa < 1:3787276/100‑1 (MQ=255) gctgctCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATAcc < 1:3301606/100‑1 (MQ=255) tgctCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTc > 1:697404/1‑100 (MQ=255) gtcacagtggtgCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGc > 1:3689042/7‑100 (MQ=255) ctCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATTCAAATACCTCGc < 1:2547301/100‑1 (MQ=255) ctCCCGGTGGTGATGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTCTGGCAAAAGAAATATGGCAATCGGGGGGTAAGGGATGCAAATACCTCGc > 2:1735084/1‑100 (MQ=255) tCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGACGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCa < 2:2722366/100‑1 (MQ=255) ccGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATg > 2:569908/1‑100 (MQ=255) ggtggtGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTc > 2:1625310/1‑100 (MQ=255) ggtggtGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTc > 1:1180759/1‑100 (MQ=255) gtggtgCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCg < 1:3007967/100‑1 (MQ=255) tggtgCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGc < 1:133211/100‑1 (MQ=255) tgctgcTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCagatcggaag > 2:510681/1‑91 (MQ=255) gctgctGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCg > 2:3090416/1‑100 (MQ=255) tgctgGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGcc > 2:3502448/1‑100 (MQ=255) tgattgtgtTTGTACTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCg < 2:203129/93‑1 (MQ=255) gctgGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGcc > 2:1069102/1‑99 (MQ=255) gctgGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCa < 1:3500910/100‑1 (MQ=255) gctgGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCa > 1:711969/1‑100 (MQ=255) gctgGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCa < 2:1529153/100‑1 (MQ=255) tgGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGc < 1:2880109/100‑1 (MQ=255) ggTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCt > 1:2832689/1‑100 (MQ=255) gtgtTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTa < 1:857337/100‑1 (MQ=255) tgtTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAg > 1:526131/1‑100 (MQ=255) gtTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGc > 1:2219578/1‑100 (MQ=255) gtTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGc > 1:2473071/1‑100 (MQ=255) gtTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGc > 2:3313849/1‑100 (MQ=255) gtTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGc > 2:2224752/1‑100 (MQ=255) ttGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTACCCt < 1:694966/100‑1 (MQ=255) tGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTg > 2:2903845/1‑100 (MQ=255) ggCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTgg > 1:3159067/1‑100 (MQ=255) ccTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTc > 1:398238/1‑100 (MQ=255) ccTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTc > 2:1175131/1‑100 (MQ=255) cTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTcc > 1:2593644/1‑100 (MQ=255) cTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTc < 2:503955/99‑1 (MQ=255) tGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCg > 1:336670/1‑100 (MQ=255) gCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGgc > 1:2494532/1‑100 (MQ=255) gCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGgc < 1:2500545/100‑1 (MQ=255) aGGTTCTCTGGGCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGgc < 2:3291197/98‑1 (MQ=255) aGGTGCTCTGGTCGTGTTATGGGAAAAGAAATATGGAACTCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGgc < 2:3291059/98‑1 (MQ=255) ggTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCt > 1:2044052/1‑100 (MQ=255) gTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTg < 2:2189901/100‑1 (MQ=255) ctctGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGttt < 2:398237/100‑1 (MQ=255) ctctGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGttt < 1:2321013/100‑1 (MQ=255) ctctGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGt > 2:1101902/1‑98 (MQ=255) tctGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGtttt > 1:2019856/1‑100 (MQ=255) ctGGTCGTGTTGTGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTa > 1:3684211/1‑100 (MQ=255) ctGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTa > 2:749405/1‑100 (MQ=255) ggTCGTGTGATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACt > 2:1417208/1‑100 (MQ=255) gTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACtt > 1:2686863/1‑100 (MQ=255) gTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACtt < 2:2686848/100‑1 (MQ=255) gtgtTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTg < 1:1940649/100‑1 (MQ=255) tgtTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTgg > 1:1675325/1‑100 (MQ=255) tgtTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTgg > 2:2469424/1‑100 (MQ=255) gtTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGt > 2:236806/1‑100 (MQ=255) gtTATGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGt > 2:1760500/1‑100 (MQ=255) aTGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCgg < 2:2017658/100‑1 (MQ=255) aTGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCgg < 2:697403/100‑1 (MQ=255) aTGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCgg < 1:2392699/100‑1 (MQ=255) tGGAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGc > 1:2466188/1‑100 (MQ=255) ggAAAAAGAAATATGGCAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTTGTCGGCa < 2:2645577/100‑1 (MQ=255) ggAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCg > 2:3394564/1‑97 (MQ=255) ggAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCa > 1:2197574/1‑100 (MQ=255) ggAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCa > 2:1504790/1‑100 (MQ=255) gAAAAAGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCAc > 1:548770/1‑100 (MQ=255) aaaaGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGc > 2:3038337/1‑100 (MQ=255) aaaGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCt < 1:1488114/100‑1 (MQ=255) aGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGt > 2:3404620/1‑100 (MQ=255) aGAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGt > 2:1040001/1‑100 (MQ=255) gAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGtt < 1:1043748/100‑1 (MQ=255) gAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGtt > 1:2881482/1‑100 (MQ=255) gAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGtt < 1:2903860/100‑1 (MQ=255) gAAATATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGtt > 2:2551931/1‑100 (MQ=255) aaaTATGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTg < 1:3175083/100‑1 (MQ=255) tatGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTg < 1:3797952/100‑1 (MQ=255) atGGAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCTAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTgg > 2:255954/1‑100 (MQ=255) ggAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGcc > 2:589754/1‑100 (MQ=255) gAAATCGGGGGGTAAGGGATGCAAATATCTCGCATGTCTCGTCGCGAGCGAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCt > 2:318717/1‑100 (MQ=255) gAAATCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCt > 1:898333/1‑100 (MQ=255) aaaTCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTg > 1:1805568/1‑100 (MQ=255) aaaTCGGGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTg > 2:1057190/1‑100 (MQ=255) | GACCAGCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGGGTAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTG > NC_000913/3248328‑3248521 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |