New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2316985NA (NA)5 (0.050)
+AAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAA
4/118 17.3 5.6% noncoding (152/197 nt) RIP162 (repetitive extragenic palindromic) element; contains 5 REP sequences and 1 IHF site RIP162 (repetitive extragenic palindromic) element; contains 5 REP sequences and 1 IHF site
?NC_000913 = 4549883 142 (0.920)intergenic (+173/+70) fimH/gntP minor component of type 1 fimbriae/fructuronate transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 162 total aligned reads displayed.

GGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATC  >  NC_000913/2316886‑2317084
                                                                                                   |                                                                                                   
gtaTGCGGCGTAATCGCCTTATCCGGCCTACGATTCCCATTAGTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCAt                                                                                                     >  1:2616989/3‑100 (MQ=255)
 gATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCAtt                                                                                                    <  1:1813236/100‑1 (MQ=255)
     cggcgTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCa                                                                                                <  1:1471838/100‑1 (MQ=255)
      ggcgTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTCAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCa                                                                                                >  2:1052363/1‑99 (MQ=255)
      ggcgTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCAc                                                                                               >  1:1192843/1‑100 (MQ=255)
      ggcgTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCAc                                                                                               >  1:1489591/1‑100 (MQ=255)
       gcgTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACt                                                                                              <  2:2616976/100‑1 (MQ=255)
       gcgTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACt                                                                                              <  1:1275783/100‑1 (MQ=255)
        cgTAAACGCCTTATCCGGCCTACGATTCCCATTATTCCAACCAATTACATTAAAGTAGGCCAGATATGACGCGTCAGCGTCGCATCTGGCATTTGCACt                                                                                              <  1:3670036/99‑1 (MQ=255)
         gTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGa                                                                                            <  2:3266991/100‑1 (MQ=255)
          tAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCCGGCAttcagtgcaaa                                                                                           >  1:3743219/1‑91 (MQ=38)
           aaaCGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAAt                                                                                          <  1:1757764/100‑1 (MQ=255)
           aaaCGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATGACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAAt                                                                                          <  2:2717292/100‑1 (MQ=255)
            aaCGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATg                                                                                         >  1:892748/1‑100 (MQ=255)
            aaCGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATg                                                                                         >  1:1118530/1‑100 (MQ=255)
             aCGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGc                                                                                        >  2:2173633/1‑100 (MQ=255)
               gccgcaTCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCg                                                                                      <  2:1372299/95‑1 (MQ=255)
               gCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCg                                                                                      >  2:765578/1‑100 (MQ=255)
               gCCTTATCCGGCCTACGATTCCCATTATTTAAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCg                                                                                      <  1:2503823/100‑1 (MQ=255)
                ccTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCgg                                                                                     >  2:60056/1‑100 (MQ=255)
                 cTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGa                                                                                    <  1:3165619/100‑1 (MQ=255)
                   tATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATg                                                                                  >  2:1227359/1‑100 (MQ=255)
                      ccGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATgcgg                                                                               <  2:2317999/100‑1 (MQ=255)
                      ccGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATgcgg                                                                               <  1:3351172/100‑1 (MQ=255)
                       cGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATgcggc                                                                              <  2:3006763/100‑1 (MQ=255)
                       cGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATgcggc                                                                              <  1:117687/100‑1 (MQ=255)
                       cGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATgcgg                                                                               <  2:3793109/99‑1 (MQ=255)
                        ggCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATgcggcg                                                                             <  1:3767090/100‑1 (MQ=255)
                        ggCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATgcggcg                                                                             >  2:892768/1‑100 (MQ=255)
                        ggCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATgcggcg                                                                             <  1:2639826/100‑1 (MQ=255)
                         gCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGt                                                                            >  1:3016437/1‑100 (MQ=255)
                         gCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGt                                                                            >  1:3837251/1‑100 (MQ=255)
                         gCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGt                                                                            >  1:2545827/1‑100 (MQ=255)
                          ccTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCGTTTGCACTGAATGCCGGATGCGGCGTa                                                                           >  2:1415898/1‑100 (MQ=255)
                          ccTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTa                                                                           <  1:3752743/100‑1 (MQ=255)
                           cTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGAtagatcggaa                                                                          >  1:917858/1‑91 (MQ=255)
                           cTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTaa                                                                          >  2:3641935/1‑100 (MQ=255)
                            tACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTaaa                                                                         >  1:2651510/1‑100 (MQ=255)
                            tACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTaaa                                                                         >  1:3461034/1‑100 (MQ=255)
                            tACGATTCCCATTATTTCAACAAATTACATTAAAATAGGCCAGATAAGACGCATCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTaaa                                                                         >  2:14892/1‑100 (MQ=255)
                                aTTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGcc                                                                     <  1:325126/100‑1 (MQ=255)
                                  tCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCtt                                                                   >  2:687554/1‑100 (MQ=255)
                                   cccATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTa                                                                  <  2:213317/100‑1 (MQ=255)
                                    ccATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTAt                                                                 >  2:1328335/1‑100 (MQ=255)
                                     cATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATc                                                                >  2:3595382/1‑100 (MQ=255)
                                     cATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATc                                                                >  2:3514163/1‑100 (MQ=255)
                                     cATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATc                                                                <  1:1199091/100‑1 (MQ=255)
                                         attTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTc                                                            <  2:1185292/100‑1 (MQ=255)
                                          tttCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTcc                                                           <  1:836106/100‑1 (MQ=255)
                                            tCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTa                                                         >  1:305288/1‑100 (MQ=255)
                                              aacaaATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACg                                                       <  2:426164/100‑1 (MQ=255)
                                              aacaaATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGACGGATGCGGCGTAAACGCCTTATCCGTCCTACg                                                       >  1:409438/1‑100 (MQ=255)
                                                   aTTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATcc                                                  <  1:165977/100‑1 (MQ=255)
                                                     tACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCcg                                                >  1:2697613/1‑100 (MQ=255)
                                                      aCATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGCTGCGGCGTAAACGCCTTATCCGTCCTACGAATCCcgc                                               <  2:2069085/100‑1 (MQ=255)
                                                       cATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCcgcg                                              <  2:2860539/100‑1 (MQ=255)
                                                         ttAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGAt                                            >  1:2684102/1‑100 (MQ=255)
                                                          tAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGAtt                                           >  1:303749/1‑100 (MQ=255)
                                                           aaaGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGAttt                                          >  2:168433/1‑100 (MQ=255)
                                                           aaaGTAGGCCAGATAAGACGCGTCAGCGTCGCAGCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAAACCCGCGAttt                                          >  2:2537647/1‑100 (MQ=255)
                                                            aaGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTc                                         <  1:1344393/100‑1 (MQ=255)
                                                             aGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTcc                                        <  1:1388016/100‑1 (MQ=255)
                                                               tAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTg                                      <  2:642846/100‑1 (MQ=255)
                                                                acgCCAGATCTGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGAt                                            <  2:3152173/91‑1 (MQ=255)
                                                                 ggCCCGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCCGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTCCGCGATTTCCTGa                                     >  2:2394354/1‑99 (MQ=255)
                                                                 ggCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGAc                                    >  1:208142/1‑100 (MQ=255)
                                                                 ggCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGAc                                    >  2:219025/1‑100 (MQ=255)
                                                                 ggCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGAc                                    >  1:2164364/1‑100 (MQ=255)
                                                                 ggCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGAc                                    >  1:1258174/1‑100 (MQ=255)
                                                                  gCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGAcc                                   >  1:3333427/1‑100 (MQ=255)
                                                                   ccAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCTGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGAccc                                  >  1:1084424/1‑100 (MQ=255)
                                                                   ccAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGAccc                                  <  1:687555/100‑1 (MQ=255)
                                                                     aGATAAGACGCGTCAGCGTCTCATCTGGCATTGGCACTGAATGCCGGATGCGGCGTAAACGCCGTATCCGTCCTACGAATCCCGCGATTTCCTGAc                                    <  2:3275265/96‑1 (MQ=255)
                                                                      gATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCctct                               >  2:2732538/1‑100 (MQ=255)
                                                                       aTAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCtctc                              <  2:2909529/100‑1 (MQ=255)
                                                                        naaGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCg                             >  2:1495787/2‑100 (MQ=255)
                                                                          aGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGc                           <  2:3071153/100‑1 (MQ=255)
                                                                           gACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCa                          >  1:1596831/1‑100 (MQ=255)
                                                                                gTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATaa                     >  1:2301011/1‑100 (MQ=255)
                                                                                gTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATaa                     <  1:3514180/100‑1 (MQ=255)
                                                                                  cAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATCTCCTGACCCTCTCGGCATATAACg                   >  2:3056801/1‑100 (MQ=255)
                                                                                   aGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGt                  <  1:1052366/100‑1 (MQ=255)
                                                                                    gCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTc                 >  1:531729/1‑100 (MQ=255)
                                                                                    gCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTc                 <  1:373193/100‑1 (MQ=255)
                                                                                         gCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGt            >  1:2976797/1‑100 (MQ=255)
                                                                                             cTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGt        >  2:1799560/1‑100 (MQ=255)
                                                                                              tGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGtt       >  2:3372186/1‑100 (MQ=255)
                                                                                              tGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGtt       <  2:2450252/100‑1 (MQ=255)
                                                                                              tGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGtn       <  2:1832997/100‑2 (MQ=255)
                                                                                              tGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCCGACCCTCTCGGCATATAACGTCAGCGTCTGtt       >  1:2088034/1‑100 (MQ=255)
                                                                                              tGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGtt       >  2:3383077/1‑100 (MQ=255)
                                                                                               ggCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGttt      >  2:153217/1‑100 (MQ=255)
                                                                                                gCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGtttt     <  2:3428323/100‑1 (MQ=255)
                                                                                                 cATTTGCACTGAATGCCGGATGCGGCTTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTa    <  1:2303537/100‑1 (MQ=255)
                                                                                                 cATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTa    >  1:1827630/1‑100 (MQ=255)
                                                                                                  aTTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTAt   <  1:1213667/100‑1 (MQ=255)
                                                                                                  aTTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTAt   <  2:2006829/100‑1 (MQ=255)
                                                                                                  aTTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTAt   <  1:3383094/100‑1 (MQ=255)
                                                                                                   tttGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATc  <  2:2475916/100‑1 (MQ=255)
                                                                                                   tttGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATc  >  2:83272/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATC  >  NC_000913/2316886‑2317084

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.