| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4235376 = | NA (NA) | 10 (0.090) | 10/156 | NT | NA | coding (1619/1650 nt) | pgi | glucosephosphate isomerase |
| ? | NC_000913 | 4235411 = | NA (NA) | intergenic (+4/‑495) | pgi/yjbE | glucosephosphate isomerase/extracellular polysaccharide production threonine‑rich protein | |||||
GACGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4235484‑4235376‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCG > NC_000913/4235411‑4235509 ctCGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGC < 1:3597440/98‑1GACGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGC < 2:900073/100‑1GACGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGC > 2:869857/1‑100GACGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGC > 2:2924833/1‑100GACGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGC > 2:193463/1‑100GACGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGC > 1:895582/1‑100GACGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGC > 1:2987992/1‑100GACGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAG > 2:12881/1‑99 ACGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 2:1880860/100‑1 ACGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:2574867/100‑1 ACGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGC < 1:1716404/99‑1 CGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCag > 2:3597468/1‑98 CGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGG < 1:1027346/100‑1 CGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGG < 2:3598980/100‑1 CGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGG < 1:410129/100‑1 CGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGG < 1:1026948/100‑1 CGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGG < 1:1497791/100‑1 GCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGT > 1:86959/1‑100 CGACCGCGTCGCATCAGGCATCGGTTGCCGGCTGCGGCGTGAACGCCTTATCAGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTT > 2:274015/1‑100 CGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCTTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTT > 2:2780009/1‑100 CGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTT < 2:3034793/100‑1 CGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTT > 1:1776454/1‑100 CGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTACCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTT < 1:778548/100‑1 GACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTA < 1:1579869/100‑1 GACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTT < 1:778335/99‑1 ACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA > 1:2951937/1‑100 CCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAAT > 1:34314/1‑100 CCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAAT > 2:2629995/1‑100 CGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATC < 2:603978/100‑1 CGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATC < 2:3631174/100‑1 GCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCA < 2:1140514/100‑1 GCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCA < 2:3489668/100‑1 ATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGG < 1:1131608/99‑1 ATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGA > 1:1337315/1‑100 ACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCG > 2:1937212/1‑100 CGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGA > 2:331818/1‑100 ATGATTAACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACG > 2:1486344/1‑100 TGATTAACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGC > 1:153380/1‑100 ATTAACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:1734082/1‑100 AACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCG > 2:1586060/1‑100 ACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCG > 1:948150/1‑99 CTTTATAGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGG < 2:3243176/100‑1 GCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAG < 2:2465642/100‑1 CGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGG < 2:2342377/100‑1 CGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGG < 2:259829/100‑1 CGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGG < 1:3699040/100‑1 CGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCCCGTCTTATCAGGCCTACAGG < 1:2263351/100‑1 GGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACTGGT > 2:286444/1‑100 GGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGT < 1:9238/100‑1 AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGAT > 2:1381428/1‑100 ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATG > 2:3140688/1‑100 ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATG > 2:2026668/1‑100 ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATG > 2:3454374/1‑100 ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATG > 1:3025609/1‑100 TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGC < 2:2864547/100‑1 TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGC < 2:2001668/100‑1 TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGC < 2:1910274/100‑1 CATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGATGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCC > 1:1047478/1‑100 CATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCC < 1:1483820/100‑1 CATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCC < 1:331818/100‑1 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCG < 2:2997067/100‑1 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCG > 1:2162670/1‑100 GACGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4235484‑4235376‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCG > NC_000913/4235411‑4235509 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |