New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3620569 =	NA (NA)	24 (0.200)	7/166	NT	100%	coding (1378/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	3620582 =	0 (0.000)					coding (1391/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

ATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAA  >  NC_000913/3620531‑3620643                                       |                                                                            aTGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCC               >  2:2913620‑M2/1‑100 (MQ=255) aTGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCC               >  2:1949643‑M2/1‑100 (MQ=255) aTGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCC               >  2:1905956‑M2/1‑100 (MQ=255) aTGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCC               >  2:1103908‑M2/1‑100 (MQ=255) aTGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCC               >  2:1596043‑M2/1‑100 (MQ=255) aTGTGGTGACGGGCCTCATCACGCGCATAACCACCCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCC               >  1:2547771‑M2/1‑100 (MQ=255)   gtggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTG             <  2:3618695‑M2/100‑1 (MQ=255)    tggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGA            >  1:1627266‑M2/1‑100 (MQ=255)     ggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTTCTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGAC           <  1:2371006‑M2/100‑1 (MQ=255)     ggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACACCCAGTTAACGTCAGCCACCGG‑GCCTGAC           <  1:2202233‑M2/100‑1 (MQ=255)     ggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGAC           <  2:1371655‑M2/100‑1 (MQ=255)     ggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGAC           <  2:481845‑M2/100‑1 (MQ=255)     ggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGAC           >  2:363202‑M2/1‑100 (MQ=255)     ggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTG             <  1:1722839‑M2/98‑1 (MQ=255)      gtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACG          <  2:2291701‑M2/100‑1 (MQ=255)      gtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACG          >  1:2454749‑M2/1‑100 (MQ=255)        gACGGGGCTCATCACGCGCATAACCACCCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTATCGTCAGGCCCCGT‑GGCTGACGtt        >  1:1607232‑M2/1‑98 (MQ=255)           gggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCCCAACCAGTTAACGTCAGGCCCGGT‑GGCTGACGttaac     >  2:467304‑M2/1‑95 (MQ=255)           gggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaac     >  2:1131095‑M2/1‑95 (MQ=255)           gggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaac     >  1:3410053‑M2/1‑95 (MQ=255)            ggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGT‑GGCTGACGttaact    >  2:3209610‑M2/1‑94 (MQ=255)            ggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaact    >  2:1501080‑M2/1‑94 (MQ=255)            ggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaact    >  2:1057192‑M2/1‑94 (MQ=255)            ggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaact    >  2:2414459‑M2/1‑94 (MQ=255)            ggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaact    >  1:3175581‑M2/1‑94 (MQ=255)              ccTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGT‑GGCTGACGttaac     >  1:1454060‑M2/1‑92 (MQ=255)              ccTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaactgg  >  2:3241944‑M2/1‑92 (MQ=255)                                       |                                                                            ATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAA  >  NC_000913/3620531‑3620643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.