New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4386017NA (NA)12 (0.100) 10/164 NT NA coding (314/315 nt) yjeO inner membrane protein
?NC_000913 = 4386039 NA (NA)intergenic (+21/+8) yjeO/mscM inner membrane protein/mechanosensitive channel protein, miniconductance

Only 100 of 201 total aligned reads displayed.

TGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAGG  >  NC_000913/4385918‑4386116
                                                                                                   |                                                                                                   
  tgGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAg                                                                                                   <  2:3657579/100‑1 (MQ=255)
   ggCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGc                                                                                                  >  2:1253327/1‑100 (MQ=255)
   ggCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGc                                                                                                  >  2:2871656/1‑100 (MQ=255)
   ggCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGc                                                                                                  >  1:933972/1‑100 (MQ=255)
     cGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCg                                                                                                <  2:413225/100‑1 (MQ=255)
     cGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCg                                                                                                >  2:2767381/1‑100 (MQ=255)
         aaaaaCGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGAtt                                                                                            >  1:1002361/1‑100 (MQ=255)
           aaaCGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTgg                                                                                          >  2:2933085/1‑100 (MQ=255)
            aaCGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGt                                                                                         >  1:1390121/1‑100 (MQ=255)
            aaCGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGt                                                                                         <  2:2899810/100‑1 (MQ=255)
             aCGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGtt                                                                                        <  2:670696/100‑1 (MQ=255)
             aCGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGtt                                                                                        <  1:2389393/100‑1 (MQ=255)
              cgcgTCTGGTTTATGTACGGCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTTAGCCGGATTgg                                                                                          <  1:3201108/97‑1 (MQ=255)
              cgcgGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGtgccggatgaacca                                                                                       >  2:1762985‑M1/1‑86 (MQ=255)
                cgGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCAt                                                                                     >  2:2028389/1‑100 (MQ=255)
                 ggCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTTTTTTTTTTCAATTTTGTTTGTGAGCCGGATTGtttttt                                                                                     >  1:722081/1‑96 (MQ=255)
                 ggCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATc                                                                                    >  2:1879899/1‑100 (MQ=255)
                 ggCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATc                                                                                    >  1:1776837/1‑100 (MQ=255)
                  gCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGAtagatcggaag                                                                                   >  1:2556502/1‑90 (MQ=255)
                  gCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATcc                                                                                   >  2:842944/1‑100 (MQ=255)
                  gCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATcc                                                                                   <  2:1537352/100‑1 (MQ=255)
                    tGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCgg                                                                                 >  2:878209/1‑100 (MQ=255)
                     ggTATATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTGCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCgg                                                                                 >  1:2790353/1‑99 (MQ=255)
                      gTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGca                                                                               <  2:2463152/100‑1 (MQ=255)
                      gTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGc                                                                                <  2:3533411/99‑1 (MQ=255)
                       tttATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCAc                                                                              <  2:17438‑M2/100‑2 (MQ=255)
                        ttATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGagccggatgaaccaatccggctc                                                                              <  2:2754723‑M1/99‑24 (MQ=255)
                         tATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCGGTTTTTTCTGCGCTATCCTTTTTGTTTGTGAGCCGGATTGGTTCATCCGTCActc                                                                            <  1:2209472‑M2/100‑4 (MQ=255)
                         tATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGtgccggatgaaccaatccggctcac                                                                            <  2:3419660‑M1/100‑26 (MQ=255)
                           tGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGtgccggatgaaccaatccggctcacaa                                                                          <  1:5328‑M1/100‑28 (MQ=255)
                           tGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCAcacaa                                                                          <  1:1115042‑M2/100‑6 (MQ=255)
                           tGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCAcacaa                                                                          <  2:827994‑M2/100‑6 (MQ=255)
                            gTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCAcacaaa                                                                         <  2:1010360‑M2/100‑7 (MQ=255)
                            gTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCAcacaaa                                                                         <  2:699117‑M2/100‑7 (MQ=255)
                             tACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCAcacaaac                                                                        >  2:1920979‑M2/1‑93 (MQ=255)
                              aCGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaact                                                                       >  2:2124981/1‑100 (MQ=255)
                               cGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGtgccggatgaaccaatccggctcacaaacaa                                                                      <  1:1762977‑M1/100‑32 (MQ=255)
                                gccgccGCGCTGGCTATTTTCGGCTACTGGCTATGGCAGAATATTCTGCGCTATCAGTTTTTTTTGGAAGCCGGATGGGTTCATCCGGCacacacac                                                                        >  1:1168045/1‑97 (MQ=255)
                                 ccACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaacttac                                                                    >  1:1293678/1‑100 (MQ=255)
                                   aCCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGtgccggatgaaccaatccggctcacaaacaaaact                                                                  <  1:1039006‑M1/100‑36 (MQ=255)
                                   aCCGCGCTGGCTATTTTCGGCTACTGGCTGCGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaacttacaa                                                                  <  1:808031/100‑1 (MQ=255)
                                    ccGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCGGGATTGGTTCATCCGGCACacaaacttacaaa                                                                 >  1:3356182/1‑100 (MQ=255)
                                    ccGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaacttacaaa                                                                 <  2:3087179/100‑1 (MQ=255)
                                    ccGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaacttacaa                                                                  <  1:398251/99‑1 (MQ=255)
                                    ccGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTCTTCTGCGCTATCAGTTTTGTTTGTGtgccggatgaaccaatccggctcacaaacaaaact                                                                  <  1:2594284‑M1/99‑36 (MQ=255)
                                     cgcgCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaacttacaaac                                                                <  2:236844/100‑1 (MQ=255)
                                     cgcgCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaacttacaa                                                                  <  1:2881967/98‑1 (MQ=255)
                                      gcgcTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaacttacaaact                                                               <  2:1363386/100‑1 (MQ=255)
                                           ggCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCg                                                          >  2:1111992/1‑100 (MQ=255)
                                           ggCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCg                                                          <  2:1673330/100‑1 (MQ=255)
                                             cTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGcc                                                        <  2:1719107/100‑1 (MQ=255)
                                              tATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCt                                                       >  1:2208058/1‑100 (MQ=255)
                                               aTTTCCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTg                                                      <  2:1836011/100‑1 (MQ=255)
                                                ttttCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTga                                                     >  2:1916538/1‑100 (MQ=255)
                                                ttttCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTga                                                     >  2:852252/1‑100 (MQ=255)
                                                  ttCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTgacg                                                   >  2:3018674/1‑100 (MQ=255)
                                                  ttCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTgacg                                                   >  1:1681989/1‑100 (MQ=255)
                                                    cGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTgacgac                                                 <  1:1433064/100‑1 (MQ=255)
                                                     ggCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGAcc                                                >  1:3037589/1‑100 (MQ=255)
                                                       cTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCtt                                              <  1:1039361/100‑1 (MQ=255)
                                                        tACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCttt                                             >  1:2663569/1‑100 (MQ=255)
                                                        tACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCttt                                             >  2:785994/1‑100 (MQ=255)
                                                           tGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGcc                                          <  2:162407/100‑1 (MQ=255)
                                                           tGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGcc                                          <  2:3480266/100‑1 (MQ=255)
                                                           tGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGcc                                          <  1:3468001/100‑1 (MQ=255)
                                                           tGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGcc                                          >  2:3262667/1‑100 (MQ=255)
                                                               tgtgGCAGTTTTTTCTGCGCTATGAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAATCTTCCCGCCTGACGACCTTTg                                            <  1:3379113/94‑1 (MQ=255)
                                                                   gCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACg                                  >  2:2182056/1‑100 (MQ=255)
                                                                   gCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACg                                  >  1:3183195/1‑100 (MQ=255)
                                                                      gTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTc                                >  1:697487/1‑99 (MQ=255)
                                                                      gTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCa                               >  1:244855/1‑100 (MQ=255)
                                                                       ttttttCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAg                              <  1:457998/100‑1 (MQ=255)
                                                                         ttttCTGCGCTATCAGTTTTGTTTGTGCGCCGGATTGGTTCACCCGGCACACAAACTTACAACCTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCg                            <  1:1275271/100‑1 (MQ=255)
                                                                          tttCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGt                           <  1:3061443/100‑1 (MQ=255)
                                                                              ttccgatctaGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTtctc                       <  1:1566038/91‑1 (MQ=255)
                                                                               gcgcTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTcc                      <  2:3546644/100‑1 (MQ=255)
                                                                                cgcTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTccc                     <  1:3051247/100‑1 (MQ=255)
                                                                                  cTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTcccc                    >  1:3451638/1‑99 (MQ=255)
                                                                                  cTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCg                   >  2:2349325/1‑100 (MQ=255)
                                                                                   tATCAGTTTTGTTTGTTAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCgt                  <  2:2201776/100‑1 (MQ=255)
                                                                                    aTCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCgtt                 <  1:343121/100‑1 (MQ=255)
                                                                                      cAGTTTTGTTTGTGAGCCGGCTTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCgtttg               >  1:2262001/1‑100 (MQ=255)
                                                                                      cAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCgtttg               >  2:3425416/1‑100 (MQ=255)
                                                                                      cAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCgtttg               <  1:3682415/100‑1 (MQ=255)
                                                                                       aGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCgtttg               >  2:3248570/1‑99 (MQ=255)
                                                                                        gTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCAcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtg             <  2:962281‑M2/100‑67 (MQ=255)
                                                                                        gTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCgtttgtt             >  2:525860/1‑100 (MQ=255)
                                                                                        gTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCgtttgtt             <  2:2588908/100‑1 (MQ=255)
                                                                                          tttgtttgTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTa           <  2:1002367/100‑1 (MQ=255)
                                                                                           ttgtttgtGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTAc          <  2:3356207/100‑1 (MQ=255)
                                                                                             gtttgtGAGCCGGATTGGTTCATCCGGCTcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgta        <  2:3094691‑M2/100‑72 (MQ=255)
                                                                                              tttgtGtgccggatgaaccaatccggctcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgtac       <  1:2179455‑M1/100‑95 (MQ=255)
                                                                                              tttgtGtgccggatgaaccaatccggctcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgtac       <  1:2034815‑M1/100‑95 (MQ=255)
                                                                                              tttgtGtgccggatgaaccaatccggctcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgtac       <  2:39156‑M1/100‑95 (MQ=255)
                                                                                              tttgtGAGCCGGATTGGTTCATCCGGCAcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgtac       <  2:3667057‑M2/100‑73 (MQ=255)
                                                                                              tttgtGAGCCGGATTGGTTCATCCGGCAcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgtac       <  2:1265393‑M2/100‑73 (MQ=255)
                                                                                                 gtgtgccggatgaaccaatccggctcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgtacata    <  1:337827‑M1/100‑98 (MQ=255)
                                                                                                  tgtgccggatgaaccaatccggctcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccaccgcgctggctattttcn   <  2:1707357‑M1/100‑99 (MQ=255)
                                                                                                   gtgccggatgaaccaatccggctcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgtacataaa  >  1:17438‑M1/1‑1 (MQ=255)
                                                                                                   gtgccggatgaaccaatccggctcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgtacataaa  >  2:1569242‑M1/1‑1 (MQ=255)
                                                                                                   |                                                                                                   
TGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAGG  >  NC_000913/4385918‑4386116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.