New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3203112 =NA (NA)8 (0.070) 5/164 NT NA coding (1222/1239 nt) cca fused tRNA nucleotidyl transferase/2'3'‑cyclic phosphodiesterase/2'nucleotidase and phosphatase
?NC_000913 3203140 = NA (NA)intergenic (+11/+170) cca/bacA fused tRNA nucleotidyl transferase/2'3'‑cyclic phosphodiesterase/2'nucleotidase and phosphatase/undecaprenyl pyrophosphate phosphatase

Only 100 of 196 total aligned reads displayed.

ACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGC  >  NC_000913/3203013‑3203211
                                                                                                   |                                                                                                   
cggcaatcaacgcctgatgcgacgcttgcgcgtcttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaat                                                                                                     <  2:496530‑M1/1‑1 (MQ=255)
 ggcaatcaacgcctgatgcgacgcttgcgcgtcttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTg                                                                                                    >  2:3189334‑M1/99‑100 (MQ=255)
  gcaatcaacgcctgatgcgacgcttgcgcgtcttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGc                                                                                                   >  2:3446343‑M1/98‑100 (MQ=255)
   caatcaacgcctgatgcgacgcttgcgcgtcttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGcc                                                                                                  >  2:3206259‑M1/97‑100 (MQ=255)
   aaaGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCC                                                                                                  <  2:3335863‑M1/100‑1 (MQ=255)
    aatcaacgcctgatgcgacgcttgcgcgtcttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGccc                                                                                                 >  2:211091‑M1/96‑100 (MQ=255)
    aatcaacgcctgatgcgacgcttgcgcgtcttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGccc                                                                                                 >  2:2372564‑M1/96‑100 (MQ=255)
     atcaacgcctgatgcgacgcttgcgcgtcttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGCCCa                                                                                                >  2:113730‑M1/95‑100 (MQ=255)
     aGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCC                                                                                                 <  2:2765585‑M1/99‑1 (MQ=255)
      gCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAA                                                                                               >  2:754302‑M1/1‑100 (MQ=255)
      gCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCA                                                                                                <  1:1900507‑M1/99‑1 (MQ=255)
      gCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCCCGTGGAGCTGGCCCGACGGAGGATTACGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAA                                                                                               >  1:2048140‑M1/1‑100 (MQ=255)
        cgtcgtTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAg                                                                                             >  2:1858404/1‑100 (MQ=255)
        cgtcgtTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAg                                                                                             >  1:1843918/1‑100 (MQ=255)
          atcttGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGcc                                                                                           <  1:3272892/97‑1 (MQ=255)
           cgtTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCt                                                                                          <  1:624100/100‑1 (MQ=255)
            gtTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTg                                                                                         >  2:2689666/1‑100 (MQ=255)
              tGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGccagat                                                                                       >  2:3272917/1‑96 (MQ=255)
               gAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAAt                                                                                      <  2:1319656/100‑1 (MQ=255)
               gAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAAt                                                                                      >  2:3394876/1‑100 (MQ=255)
                aaGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATg                                                                                     <  1:3704961/100‑1 (MQ=255)
                  gCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACTGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAg                                                                                   <  1:2363878/100‑1 (MQ=255)
                  gCGGGATTGAAAGGTGTGGAGGTGCGCTAGGAGCTGAAACGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAg                                                                                   <  1:3386366/100‑1 (MQ=255)
                   cGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGt                                                                                  >  1:900150/1‑100 (MQ=255)
                   cGGGATTTAAAGGGGTGGAGATTCGCGAGGAGCTGACCCGACGGAGGATTGCGGCGGTAGCCAGCTGGAACGGACAACGTTGCCCAAAgagagaagg                                                                                     >  1:2795417/1‑89 (MQ=255)
                    gggATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTa                                                                                 >  2:3417375/1‑100 (MQ=255)
                    gggATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTa                                                                                 <  2:2979881/100‑1 (MQ=255)
                      gATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTAtt                                                                               <  1:1085601‑M2/100‑3 (MQ=255)
                       aTTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTAttg                                                                              <  1:3010392‑M2/100‑4 (MQ=255)
                        tttAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTAttgg                                                                             <  2:2994240‑M2/100‑5 (MQ=255)
                           aaaGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTAttgggca                                                                          <  1:1164174‑M2/100‑8 (MQ=255)
                            cgcgtcttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGCCCAAAGCCTGAATGAGTATTGGGCAt                                                                         >  1:3146587‑M1/72‑100 (MQ=255)
                            aaGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCAt                                                                         >  1:176202/1‑100 (MQ=255)
                             gcgtcttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGCCCAAAGCCTGAATGAGTATTGGGCAtt                                                                        >  1:245730‑M1/71‑100 (MQ=255)
                             gcgtcttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGCCCAAAGCCTGAATGAGTATTGGGCAtt                                                                        >  2:3613127‑M1/71‑100 (MQ=255)
                             aGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAtactcattcaggctttgggcaac                                                                        <  1:2045103‑M1/100‑24 (MQ=255)
                             aGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCAtt                                                                        <  2:1803976/100‑1 (MQ=255)
                              ggTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCAttt                                                                       >  1:2639602/1‑100 (MQ=255)
                                 gtgGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGc                                                                    >  2:2044782/1‑100 (MQ=255)
                                 gtgGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGc                                                                    >  2:2709412/1‑100 (MQ=255)
                                 gtgGAGATTCGCGAGGAGCTGACCCGACGGCGGATAGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCACAAAGCCTGAATGAGTATTGGGCATTTTGc                                                                    >  2:2202326/1‑100 (MQ=255)
                                 cttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGc                                                                    >  2:1529246‑M1/67‑100 (MQ=255)
                                 cttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGc                                                                    >  1:114766‑M1/67‑100 (MQ=255)
                                   ggAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGcc                                                                   <  2:488880/99‑1 (MQ=255)
                                   ggAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCg                                                                  <  1:1519899/100‑1 (MQ=255)
                                   ggAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATCGGGCATTTTGcag                                                                  <  2:2509838/100‑3 (MQ=255)
                                    gagaTTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCgg                                                                 <  2:1562893/100‑1 (MQ=255)
                                    gagaTTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCgg                                                                 <  1:101810/100‑1 (MQ=255)
                                    gagaTTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCg                                                                  <  1:927141/99‑1 (MQ=255)
                                       aTTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATg                                                              <  1:2905828/100‑1 (MQ=255)
                                        ttCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgc                                                             >  2:3091121/1‑100 (MQ=255)
                                         tCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAtactcattcaggctttgggcaacgttgttccttcc                                                            <  1:2724604‑M1/100‑36 (MQ=255)
                                          tcttccgatcTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgcgg                                                           <  2:1697153/91‑1 (MQ=255)
                                          cgcgAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgcgg                                                           >  1:3093821/1‑100 (MQ=255)
                                                 agCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAAc                                                    <  1:3244145/100‑1 (MQ=255)
                                                  gCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAAc                                                    >  2:2023905/1‑99 (MQ=255)
                                                  gCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACg                                                   <  1:2229724/100‑1 (MQ=255)
                                                    tcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGcc                                                 >  2:2604438‑M1/48‑100 (MQ=255)
                                                    tGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGcc                                                 <  2:407709/100‑1 (MQ=255)
                                                    tGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGcc                                                 <  2:1085607/100‑1 (MQ=255)
                                                     gACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGcca                                                >  1:2948305/1‑99 (MQ=255)
                                                     gACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCt                                                >  2:374539/1‑100 (MQ=255)
                                                     gACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCt                                                >  1:3406093/1‑100 (MQ=255)
                                                       cccGACGGCGGATTGCGGCGGTAGCCCGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCt                                                >  2:1221559/1‑98 (MQ=255)
                                                       cccGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTa                                              >  1:1478963/1‑100 (MQ=255)
                                                       cccGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTa                                              >  2:733900/1‑100 (MQ=255)
                                                       cccGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCATGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCtt                                               >  1:1693897/1‑99 (MQ=255)
                                                       ccagACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTTCCGGATGCGGCGTAAACGCCtt                                               >  1:1377906/4‑99 (MQ=255)
                                                        ccGACGGCGGATTGCGGCGGTAGCCAGCTGGACGGACCAACGTCGCCCAAAGCCTGAATGAGCATTGGGCATTTTGCCGGATGCGGCGTAACCGCCTTAt                                             >  1:3474027/1‑100 (MQ=38)
                                                        ccGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTAt                                             >  2:112505/1‑100 (MQ=255)
                                                          gACGTCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGGCCAAAGCCTGAATGAGTATTGCGCATTTTGCCGGATGCGGCTTAAACGCCTTATcc                                           <  1:938039/100‑1 (MQ=39)
                                                          gACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATcc                                           <  2:663785/100‑1 (MQ=255)
                                                              gcggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCAGTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCt                                       <  1:207587/100‑1 (MQ=255)
                                                               cggATTGCGGCAGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTa                                      >  1:2843416/1‑100 (MQ=255)
                                                                ggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTAc                                     <  1:2340264/100‑1 (MQ=255)
                                                                 gATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCACAAAGACTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTAc                                     <  1:2170548/99‑1 (MQ=255)
                                                                   ttGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATg                                  <  2:3317810/100‑1 (MQ=255)
                                                                   ttGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATg                                  >  1:2788408/1‑100 (MQ=255)
                                                                   ttGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATg                                  >  1:3372117/1‑100 (MQ=255)
                                                                        gcggTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAAc                             <  2:2946441/100‑1 (MQ=255)
                                                                         cggTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACg                            <  1:1583528/100‑1 (MQ=255)
                                                                          ggTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCCACg                            >  1:449155/1‑99 (MQ=255)
                                                                             aGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAg                        <  1:3249750/100‑1 (MQ=255)
                                                                              gCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGt                       >  2:144723/1‑100 (MQ=255)
                                                                                cAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGTGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTg                     <  1:3180929/100‑1 (MQ=255)
                                                                                cAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTg                     >  1:1675146/1‑100 (MQ=255)
                                                                                 aGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGt                    >  2:1681410/1‑100 (MQ=255)
                                                                                   cTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAg                  >  2:610931/1‑100 (MQ=255)
                                                                                    tGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAgg                 <  2:871634/100‑1 (MQ=255)
                                                                                     ggaaggaaCAACGTTGCCCAAAGCCTGAATGAGTAttgggcaacgttgttccttccagctggctaccgccgcaatccgccgtcgggtcagctcctcgcga                <  1:2724604‑M2/100‑66 (MQ=255)
                                                                                        aggaaCAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTg             >  2:916526/1‑100 (MQ=255)
                                                                                          gaaCTACGTTGCCCAAAGCCTGAATGGGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTCATGTCAATGACAGTTGTAGGCCTg             <  1:643333/98‑1 (MQ=38)
                                                                                          gaaCAACGTTGCCCAAAGCCTGAATGAGTAttgggcaacgttgttccttccagctggctaccgccgcaatccgccgtcgggtcagctcctcgcgaatctc           <  1:3221437‑M2/100‑71 (MQ=255)
                                                                                          gaaCAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGAt           <  1:755782/100‑1 (MQ=255)
                                                                                           aacaacGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATa          <  1:891472/100‑1 (MQ=255)
                                                                                              aacGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGa       >  1:809919/1‑100 (MQ=255)
                                                                                                cGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGAcg     >  1:2395727/1‑100 (MQ=255)
                                                                                                 gTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGAcgc    >  2:2291396/1‑100 (MQ=255)
                                                                                                  ttGCTCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCAGCGTAAACGCCTTATCTGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGAcgc    <  1:1564984/99‑1 (MQ=255)
                                                                                                   tGCCCAAtactcattcaggctttgggcaacgttgttccttccagctggctaccgccgcaatccgccgtcgggtcagctcctcgcgaatctccacaccttt  >  1:2071258‑M1/1‑7 (MQ=255)
                                                                                                   |                                                                                                   
ACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGC  >  NC_000913/3203013‑3203211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.