BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 50326	NA (NA)	6 (0.050)	6/164	NT	NA	intergenic (+24/+54)	folA/apaH	dihydrofolate reductase/diadenosine tetraphosphatase
*	?	NC_000913	= 50359	NA (NA)	6 (0.050)	6/164	NT	NA	noncoding (33/37 nt)	REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 170 total aligned reads displayed.

GGTATTCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGC  >  NC_000913/50227‑50425

ggTATTCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAgc                                                                                                     >  2:207532/1‑100 (MQ=255)

 gTATTCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCg                                                                                                    >  2:91857‑M1/1‑99 (MQ=255)

   aTTCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCgcc                                                                                                  <  2:2601722‑M1/100‑4 (MQ=255)

   aTTCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCgcc                                                                                                  <  1:3700071‑M1/100‑4 (MQ=255)

   aTTCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCgcc                                                                                                  <  2:2033407‑M1/100‑4 (MQ=255)

    ttCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCgccg                                                                                                 >  2:2969384‑M1/1‑96 (MQ=255)

     tCAGCGAATTCTACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCgccgg                                                                                                <  1:1708844‑M1/100‑6 (MQ=255)

     tCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCgccgg                                                                                                >  2:203563‑M1/1‑95 (MQ=255)

      nagCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCgccgga                                                                                               >  2:1395130‑M1/2‑94 (MQ=255)

      cAGCGAATTCCACGATGCCGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGACTAGCgc                                                                                                   >  2:223763‑M1/1‑94 (MQ=255)

       aGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCgccggat                                                                                              >  1:495361‑M1/1‑93 (MQ=255)

       aGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGAgccggat                                                                                              >  2:2939166‑M1/1‑93 (MQ=255)

        gCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATg                                                                                             >  2:3057791/1‑100 (MQ=255)

        gCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATg                                                                                             <  2:236022/100‑1 (MQ=255)

          gAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCg                                                                                           <  1:1113177/100‑1 (MQ=255)

          gAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCg                                                                                           <  1:7967/100‑1 (MQ=255)

           aaTTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGa                                                                                          <  2:1991448/100‑1 (MQ=255)

            aTTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGAc                                                                                         >  1:1701462/1‑100 (MQ=255)

              tacACGATGCTGAAGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGc                                                                                       >  2:2495119/3‑100 (MQ=255)

                cACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCg                                                                                     >  2:3684794/1‑100 (MQ=255)

                cACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCg                                                                                     <  1:2866294/100‑1 (MQ=255)

                 aCGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCgg                                                                                    <  1:292840/100‑1 (MQ=255)

                  cGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGt                                                                                   <  2:724328/100‑1 (MQ=255)

                    aTGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTcg                                                                                 <  1:3690374/100‑1 (MQ=255)

                     tGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTcgc                                                                                >  2:1848119/1‑100 (MQ=255)

                     tGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTcgc                                                                                >  2:3293971/1‑100 (MQ=255)

                         gATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCt                                                                            >  2:2669243/1‑100 (MQ=255)

                         gATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCt                                                                            <  1:3293946/100‑1 (MQ=255)

                          aTGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCtt                                                                           >  1:2141725/1‑100 (MQ=255)

                            gcgcAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCgccggacgcgaccggcgtcgcatccggc                                                                         <  1:1495058‑M1/100‑29 (MQ=255)

                            gcgcAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAAGTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTc                                                                             <  2:2592973/96‑1 (MQ=255)

                             ctccagaatctcAAAGCAATAGCTGTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATc                                                                        >  1:1149997/9‑100 (MQ=37)

                             cgcAGGACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATC                                                                        <  1:927017‑M2/100‑1 (MQ=255)

                             cgcAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATC                                                                        <  1:3157846‑M2/100‑1 (MQ=255)

                                 gAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGC                                                                    >  1:203563‑M2/1‑100 (MQ=255)

                                  aaCTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCgccggataagacgcgaccggcgtcgcatccggcg                                                                   <  1:9120‑M1/100‑35 (MQ=255)

                                    ctctCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCgccggataagacgcgaccggcgtcgcatccggcgct                                                                 <  1:91857‑M1/100‑37 (MQ=255)

                                     tctcACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTc                                                                <  1:1292138/100‑1 (MQ=255)

                                      ctcACAGCTATTGCTTTGAGATACTGGAGCGCCGGTAGTTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTcc                                                               <  1:2495105/100‑1 (MQ=255)

                                       tcACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCgccggataagacgcgaccggcgtcgcatccggcgctagc                                                              <  1:3048140‑M1/100‑40 (MQ=255)

                                            gCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATc                                                         >  2:2293680/1‑100 (MQ=255)

                                              tATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAg                                                       >  1:2022719/1‑100 (MQ=255)

                                                ttGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGc                                                     <  2:2683345/100‑1 (MQ=255)

                                                ttGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGc                                                     <  2:2322175/100‑1 (MQ=255)

                                                  gCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTCTATCAGGCtg                                                   >  1:2433757/1‑100 (MQ=255)

                                                  gCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCtg                                                   >  2:2121036/1‑100 (MQ=255)

                                                  gCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCtg                                                   >  2:225478/1‑100 (MQ=255)

                                                  gCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGACTAGCGCCGGATGAGACGCCGGTCGCGTCTTATCCAGCCTTACTATATCAgagtg                                                   >  2:158382/1‑96 (MQ=255)

                                                   cTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCtgt                                                  >  1:3129300/1‑100 (MQ=255)

                                                       gagaTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGttt                                              <  2:1940479/100‑1 (MQ=255)

                                                        agaTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTa                                             <  2:985386/100‑1 (MQ=255)

                                                         gaTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTaa                                            >  2:854796/1‑100 (MQ=255)

                                                         gaTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTaa                                            <  2:1589770/100‑1 (MQ=255)

                                                          aTTCTTGAGCGGCTGTAATTTTTTATAGAATTTACTGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGTCTTCCTATATCAGGCTGTGTTTaat                                           <  1:535783/100‑2 (MQ=255)

                                                          aTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAg                                           <  2:1358932/100‑1 (MQ=255)

                                                          aTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAg                                           >  2:419085/1‑100 (MQ=255)

                                                          aTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAg                                           <  2:1886696/100‑1 (MQ=255)

                                                          aTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTCCCTATATCAGGCTGTGTTTAAg                                           <  2:615607/100‑1 (MQ=255)

                                                           ttCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGa                                          >  2:566029/1‑100 (MQ=255)

                                                            tCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGAc                                         >  2:874071/1‑100 (MQ=255)

                                                            tCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGAc                                         >  1:3451151/1‑100 (MQ=255)

                                                              tGGAGCGGCGGTAATTTTGTATCTAATTTACGCCTAGCCCCAGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTCTTTAAg                                           <  1:3173621/96‑1 (MQ=38)

                                                                  gcggcgGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGAcgccgcc                                   <  1:2630280/100‑1 (MQ=255)

                                                                  gcggcgGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGCCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGAcgccgcc                                   <  2:3501935/100‑1 (MQ=255)

                                                                   cggcggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGAcgccgccg                                  <  1:566026/100‑1 (MQ=255)

                                                                    ggcggTAATTTTGTATAAAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGAcgccgccgc                                 <  1:1015716/100‑1 (MQ=255)

                                                                     gcggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCt                                >  1:1786640/1‑100 (MQ=255)

                                                                      cggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCtt                               >  1:163048/1‑100 (MQ=255)

                                                                        gTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCg                             >  2:3541856/1‑100 (MQ=255)

                                                                        gTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCg                             >  1:466853/1‑100 (MQ=255)

                                                                         tAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGc                            <  2:1150003/100‑1 (MQ=255)

                                                                         tAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGc                            <  2:3051778/100‑1 (MQ=255)

                                                                         tAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGc                            <  2:2312143/100‑1 (MQ=255)

                                                                          aaTTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGcc                           <  1:3360099/100‑1 (MQ=255)

                                                                           aTTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGccc                          >  1:159815/1‑100 (MQ=255)

                                                                           aTTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGccc                          <  1:1898704/100‑1 (MQ=255)

                                                                              ttGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCaaa                       <  2:1202333/100‑1 (MQ=255)

                                                                               tGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAAt                      <  2:2205418/100‑1 (MQ=255)

                                                                                gTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCTGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATc                     >  1:1099176/1‑100 (MQ=255)

                                                                                gTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATc                     >  2:3275800/1‑100 (MQ=255)

                                                                                  ataGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATcc                    >  1:3641617/1‑99 (MQ=255)

                                                                                  ataGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCt                   >  2:1785509/1‑100 (MQ=255)

                                                                                  ataGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCt                   <  2:2433770/100‑1 (MQ=255)

                                                                                  ataGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCt                   >  1:618581/1‑100 (MQ=255)

                                                                                   taGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCtt                  <  1:2216177/100‑1 (MQ=255)

                                                                                   taGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCtt                  <  1:364653/100‑1 (MQ=255)

                                                                                   taGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCtt                  >  2:3001065/1‑100 (MQ=255)

                                                                                   taGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCtt                  <  1:3057769/100‑1 (MQ=255)

                                                                                    cttccgatctgCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTa                 <  2:2895137/90‑1 (MQ=255)

                                                                                     gAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTAt                >  1:929359/1‑100 (MQ=255)

                                                                                     gAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTAt                <  1:1014547/100‑1 (MQ=255)

                                                                                      aaTTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATg               <  2:2459240/100‑1 (MQ=255)

                                                                                        tttACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGcc             <  2:535320/100‑1 (MQ=255)

                                                                                          tACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCgg           >  2:1692820/1‑100 (MQ=255)

                                                                                             ggCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTc        <  1:2468269/100‑1 (MQ=255)

                                                                                             ggCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTc        >  1:2990889/1‑100 (MQ=255)

                                                                                               cTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGa      >  2:3229590/1‑100 (MQ=255)

                                                                                                  gcgcCGGATGCGACGCCGGTCGCGTCTTATCCGGCgctagccgtaaattctatacaaaattaccgccggtccaaactctcaaagcaatagctgtgagag    <  1:3485748‑M2/99‑65 (MQ=255)

                                                                                                   cgcCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACggn  <  1:1395124/100‑2 (MQ=255)

                                                                                                   cgcCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGc  <  2:1574194/100‑1 (MQ=255)

GGTATTCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGC  >  NC_000913/50227‑50425

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.