BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3546222 =	NA (NA)	6 (0.050)	6/166	NT	NA	noncoding (1/36 nt)	REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	3546254 =	NA (NA)	6 (0.050)	6/166	NT	NA	noncoding (33/36 nt)	REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 194 total aligned reads displayed.

CGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCATAATTTAAATTT  >  NC_000913/3546155‑3546353

cgcgATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGcc                                                                                                     >  1:1512506/1‑100 (MQ=255)

cgcgATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGcc                                                                                                     <  2:1113695/100‑1 (MQ=255)

   gATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATACCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTAc                                                                                                  <  1:3167780/100‑1 (MQ=255)

     gaaacgaaccgaggatttgacaaagcaatgctgcgccaacgtctggcacatgttcaacgtagGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGt                                                                                                >  1:2103539‑M1/63‑100 (MQ=255)

      ctcACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGtt                                                                                               <  1:2571386/100‑1 (MQ=255)

      ctcACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGtt                                                                                               >  1:1718131/1‑100 (MQ=255)

      ctcACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGtt                                                                                               >  2:2332413/1‑100 (MQ=255)

       tcACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTg                                                                                              <  2:758874/100‑1 (MQ=255)

        cACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGa                                                                                             >  1:1503899/1‑100 (MQ=255)

         cgaaccgaggatttgacaaagcaatgctgcgccaacgtctggcacatgttcaacgtaggcccgaaatgacgctaaagcgtcatttcgggcCTACGTTGaa                                                                                            <  2:3584934‑M2/10‑1 (MQ=255)

         aCCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGaa                                                                                            <  2:1518213/100‑1 (MQ=255)

          ccGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAAc                                                                                           <  1:1094777/100‑1 (MQ=255)

          ccGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAAc                                                                                           <  2:2997153/100‑1 (MQ=255)

           tgAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACa                                                                                          <  1:802473/99‑1 (MQ=255)

              cgaggatttgacaaagcaatgctgcgccaacgtctggcacatgttcaacgtagGCACGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAtg                                                                                        >  1:749416‑M1/54‑99 (MQ=255)

                acCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGc                                                                                     >  2:412523/1‑100 (MQ=255)

                acCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGc                                                                                     <  2:976722/100‑1 (MQ=255)

                 ccAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGcc                                                                                    >  2:2796061/1‑100 (MQ=255)

                 ccAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGcc                                                                                    >  2:8366/1‑100 (MQ=255)

                  cAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCa                                                                                   >  2:1456725/1‑100 (MQ=255)

                   aGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGaaagatcggaag                                                                                  >  1:507865/1‑90 (MQ=255)

                   aGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAg                                                                                  >  1:2739466/1‑100 (MQ=255)

                   aGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAg                                                                                  >  1:1469174/1‑100 (MQ=255)

                     cgcgGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGAc                                                                                >  2:689877/1‑100 (MQ=255)

                         gcgAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTg                                                                            >  1:715925/1‑100 (MQ=255)

                          cgAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGatcggaa                                                                           >  2:2130521/1‑94 (MQ=255)

                          cgAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTgg                                                                           <  1:2120460/100‑1 (MQ=255)

                           gAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGgc                                                                          <  2:2933604/100‑1 (MQ=255)

                            aaCACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGgcg                                                                         >  2:1823578/1‑100 (MQ=255)

                             acacTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGgcgc                                                                        <  1:3353887/100‑1 (MQ=255)

                             acacTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGgc                                                                          <  1:1045074/98‑1 (MQ=255)

                               acTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCgcag                                                                      >  1:1121380/1‑100 (MQ=255)

                                cTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCgcagc                                                                     >  2:3633930/1‑100 (MQ=255)

                                cTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCgcagc                                                                     <  2:1852028/100‑1 (MQ=255)

                                  ccTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGTCGCAGCAt                                                                   >  1:1797891/1‑100 (MQ=255)

                                  ccTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCAt                                                                   >  2:470536/1‑100 (MQ=255)

                                  ccTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCAt                                                                   >  1:877119/1‑100 (MQ=255)

                                  ccTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCAt                                                                   >  2:2659739/1‑100 (MQ=255)

                                  ccTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCAt                                                                   <  2:2555752/100‑1 (MQ=255)

                                     actactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGc                                                                <  1:2721769/100‑1 (MQ=255)

                                      ctactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCt                                                               >  1:964598/1‑100 (MQ=255)

                                        actaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCttt                                                             >  1:1004551/1‑100 (MQ=255)

                                        actaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAACCCTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCttt                                                             >  1:3479995/1‑100 (MQ=255)

                                         ctaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCttt                                                             >  2:1083714/1‑99 (MQ=255)

                                           ccgatctCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTc                                                          <  2:3455945/94‑1 (MQ=255)

                                           aaGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTc                                                          <  2:2541312/100‑1 (MQ=255)

                                           aaGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTc                                                          <  2:3146616/100‑1 (MQ=255)

                                           aaGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTc                                                          >  2:3567656/1‑100 (MQ=255)

                                           aaGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTc                                                          >  2:2337431/1‑100 (MQ=255)

                                           aaGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTc                                                          >  2:107640/1‑100 (MQ=255)

                                            aGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCa                                                         <  2:3201850/100‑1 (MQ=255)

                                             tttATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCaa                                                        >  2:2407079/2‑100 (MQ=255)

                                                aTCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATc                                                     >  2:1666533/1‑100 (MQ=255)

                                                 tCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATcc                                                    <  2:1162576/100‑1 (MQ=255)

                                                  ccccTCTTTTGTCGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGACGCAGCATTGCTTTGTCAAATCCt                                                   >  1:704860/1‑100 (MQ=255)

                                                  ccccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAGATcgg                                                   >  1:3455918/1‑98 (MQ=255)

                                                    nctctTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCg                                                 >  2:3242123/2‑100 (MQ=255)

                                                    ccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCg                                                 >  2:2836787/1‑100 (MQ=255)

                                                    ccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCg                                                 >  2:1315115/1‑100 (MQ=255)

                                                     ctctTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCgg                                                <  1:2820548/100‑1 (MQ=255)

                                                     ctctTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCgg                                                >  1:3210031/1‑100 (MQ=255)

                                                       ctTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGtt                                              >  2:1170900/1‑100 (MQ=255)

                                                       ctTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGtt                                              >  2:3416054/1‑100 (MQ=255)

                                                        ttttGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTc                                             <  1:456388/100‑1 (MQ=255)

                                                           tGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGtt                                          >  2:1023181/1‑100 (MQ=255)

                                                           tGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGtt                                          >  2:509448/1‑100 (MQ=255)

                                                            gTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGttt                                         >  2:1298504/1‑100 (MQ=255)

                                                              aGATTGCCCGATGCGACGCTAAAGCGTCATTTCGCGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTcc                                       <  1:1943140/100‑1 (MQ=255)

                                                               gATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTccc                                      >  1:3335814/1‑100 (MQ=255)

                                                               gATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTccc                                      <  1:1298498/100‑1 (MQ=255)

                                                                 ttGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTcccc                                     <  2:2112771/99‑1 (MQ=255)

                                                                    CCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGTTTTGTCAAATCCTCGGTTCGTttctc                                      <  1:2149225‑M1/95‑3 (MQ=255)

                                                                     ccgaaatgacgctttagcgtcgcatcgggcCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGat                                >  1:976963‑M2/31‑100 (MQ=255)

                                                                     CCGGTGCGACGTTAACGCGTCATGTCGGGCCCACGTTGAACATGTGCCAGACGTTCGCTCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGat                                >  1:2866200‑M1/1‑100 (MQ=255)

                                                                     CCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGat                                >  2:1372402‑M1/1‑100 (MQ=255)

                                                                       GATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGataa                              >  2:2982434‑M1/1‑100 (MQ=255)

                                                                         tGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGataata                            >  2:2239636/1‑100 (MQ=255)

                                                                         tGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGataata                            >  2:3464453/1‑100 (MQ=255)

                                                                           cGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATg                          <  2:792939/100‑1 (MQ=255)

                                                                            gACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATg                          <  1:1307073/99‑1 (MQ=255)

                                                                            gACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGa                         <  2:2578861/100‑1 (MQ=255)

                                                                              cGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGAcc                       <  2:2213243/100‑1 (MQ=255)

                                                                                cTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCaa                     >  2:612676/1‑100 (MQ=255)

                                                                                cTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCaa                     >  2:3621632/1‑100 (MQ=255)

                                                                                 tAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAAc                    >  1:2462475/1‑100 (MQ=255)

                                                                                  aaaGCGTCATTTCGGTCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAAcc                   <  2:2387067/100‑1 (MQ=255)

                                                                                  aaaGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAAcc                   <  1:3385155/100‑1 (MQ=255)

                                                                                   aaGCGACAGTTCGGGCCTACGTTGAACATGTGCCAGACGTTTGCGCCGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGAc                        >  1:672883/1‑94 (MQ=255)

                                                                                    aGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACctc                 >  1:2534842/1‑100 (MQ=255)

                                                                                    aGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACctc                 >  1:3626747/1‑100 (MQ=255)

                                                                                      cGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCtctc               <  1:3040607/100‑1 (MQ=255)

                                                                                       gTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCa              <  1:3672833/100‑1 (MQ=255)

                                                                                          aTTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCAGTTCGTTTCCCCGCGATAATATGATCAACCTCTCATaa           <  1:2283503/100‑1 (MQ=255)

                                                                                            tttgggcCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCATAAtt         <  2:353556‑M2/93‑1 (MQ=255)

                                                                                            ttCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCATaatt         <  2:3179076/100‑1 (MQ=255)

                                                                                             tcgggcCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCATAAttt        <  2:880866‑M2/94‑1 (MQ=255)

                                                                                               gggcCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCATAATTTaa      >  2:2566733‑M2/5‑100 (MQ=255)

                                                                                                  ccTACGTTGAATATGTGCCAGACTTTGGCGCAGCACTGTTTAATCAAATACCCAGTATTATTCAACGCGATAATATGAACAATCTATCATaatttaaatt   <  1:2677962/100‑1 (MQ=255)

                                                                                                  cCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCATAATTTAAAtt   >  1:361262‑M2/2‑100 (MQ=255)

                                                                                                  cCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTACTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCATAATTTAAAtt   <  1:3606912‑M2/99‑1 (MQ=255)

CGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCATAATTTAAATTT  >  NC_000913/3546155‑3546353

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.