New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4000222NA (NA)10 (0.080) 5/164 NT NA noncoding (73/103 nt) RIP288 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP288 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 4000252 NA (NA)noncoding (103/103 nt) RIP288 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP288 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 177 total aligned reads displayed.

GGATGCGGTGCTGCGCACCTTATTTGGCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGATTG  >  NC_000913/4000153‑4000350
                                                                                                   |                                                                                                   
ggATGCGGTGCTGCGTACCTTATTTGGCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGC                                                                                                     >  1:2185726‑M2/1‑100 (MQ=255)
    gCGGTGCTGCGCACCTTATTTGGCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCt                                                                                                 <  2:1302909/100‑1 (MQ=255)
     cGGTGGTGCGCACCTTATTTGTCCTAAAAAATCCCTCAGGTTCAATTAATCGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTg                                                                                                <  1:3689971/100‑1 (MQ=25)
     cGGTGCTGCGCACCTTATTTGGCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTg                                                                                                >  2:3531943/1‑100 (MQ=255)
      ggTGCTGCGCACCTTATTTGGCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTgc                                                                                               >  1:2853649/1‑100 (MQ=255)
       gTGCTGCGCACCTTATTTGGCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCctacatg                                                                                              <  2:807197‑M2/100‑8 (MQ=255)
       gTGCTGCGCACCTTATTTGGCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTgcg                                                                                              <  2:2378853/100‑1 (MQ=255)
       gTGCTGCGCACCTTATTTGGCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTgcg                                                                                              >  1:1397837/1‑100 (MQ=255)
       gTGCTGCGCACCTTATTTGGCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTgcg                                                                                              <  1:3602858/100‑1 (MQ=255)
                aCCTTATTTGGCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCttta                                                                                     <  2:3430867/100‑3 (MQ=255)
                aCCTTATTTGGCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCa                                                                                     <  2:1511563/100‑1 (MQ=255)
                 ccTTATTTGGCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAg                                                                                    <  1:2375100/100‑1 (MQ=255)
                 ccTTATTTGGCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAg                                                                                    <  2:2901555/100‑1 (MQ=255)
                      tttGGCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCt                                                                               <  1:3478579/100‑1 (MQ=255)
                       ttGGCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTg                                                                              <  2:2072006/100‑1 (MQ=255)
                          gCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTg                                                                              >  2:3196942/1‑97 (MQ=255)
                          gCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGaca                                                                           >  2:2866796/1‑100 (MQ=255)
                           ccTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCCTCTGCGCCATCTTCAGTATCTGacac                                                                          >  2:2262770/1‑100 (MQ=255)
                           ccTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGacan                                                                          <  1:1496267/100‑2 (MQ=255)
                           ccTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGacac                                                                          <  1:644518/100‑1 (MQ=255)
                           ccTAAAAAATCATTCAGATTCAATAAATCGCAACGTCATGTAGGCCGGATAGGGCGTGTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGac                                                                            <  1:513012/98‑1 (MQ=255)
                            cTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCCTCTTCAGTATCTGAcaca                                                                         >  2:2031401/1‑100 (MQ=255)
                                aaaaTCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAAc                                                                     >  2:2438894/1‑100 (MQ=255)
                                aaaaTCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAAc                                                                     <  2:3069194/100‑1 (MQ=255)
                                 aaaTCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACt                                                                    >  2:3261905/1‑100 (MQ=255)
                                  aaTCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTa                                                                   >  1:2900033/1‑100 (MQ=255)
                                     cATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCg                                                                <  1:2658102/100‑1 (MQ=255)
                                     cATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCg                                                                <  1:1171193/100‑1 (MQ=255)
                                       ttCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGtt                                                              >  2:183906/1‑100 (MQ=255)
                                       ttCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGtt                                                              >  1:1138421/1‑100 (MQ=255)
                                        tCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGttt                                                             <  1:1301219/100‑1 (MQ=255)
                                        tCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGttt                                                             >  2:432095/1‑100 (MQ=255)
                                        tCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGttt                                                             <  2:1214623/100‑1 (MQ=255)
                                         cAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGtttt                                                            >  1:3390895/1‑100 (MQ=255)
                                          aGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTa                                                           <  1:2380783/100‑1 (MQ=255)
                                           gATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTaa                                                          >  2:3203312/1‑100 (MQ=255)
                                           gATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTaa                                                          <  2:2423624/100‑1 (MQ=255)
                                            aTTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAAc                                                         <  2:926842/100‑1 (MQ=255)
                                            aTTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAAc                                                         <  2:1258400/100‑1 (MQ=255)
                                            aTTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAAc                                                         <  2:1664518/100‑1 (MQ=255)
                                             ttcagttacttGCACCGTCATGTATGCCCCATAGGGCTCTTACGCCGCATCCGGCATCTGCGCCATCTTCCGTATCTGACACAAATCTATCGTTGTAAcc                                                        <  1:3415831/91‑1 (MQ=255)
                                             ttCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAAcc                                                        <  2:276434/100‑1 (MQ=255)
                                               cAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCtt                                                      >  2:1707227/1‑100 (MQ=255)
                                               cAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGAGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCt                                                       >  1:3163917/1‑99 (MQ=255)
                                                aaTAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCttt                                                     >  2:2176558/1‑100 (MQ=255)
                                                 aTAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTc                                                    <  1:792012/100‑1 (MQ=255)
                                                   aaaTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTcc                                                   <  2:2637146/99‑1 (MQ=255)
                                                    aaTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGc                                                 >  1:492620/1‑100 (MQ=255)
                                                       tGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCg                                              <  2:3076371/100‑1 (MQ=255)
                                                         cAACGTCATGTAGGCCGGGTAGGGCGGTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTCACCTTTCCGCTCGAc                                           >  1:2766131/1‑100 (MQ=255)
                                                         cAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGAc                                           <  1:1450868/100‑1 (MQ=255)
                                                         cAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGAc                                           <  1:3058812/100‑1 (MQ=255)
                                                           aCGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACgg                                         <  1:2059163/100‑1 (MQ=255)
                                                             gTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGaa                                       <  1:2331029/100‑1 (MQ=255)
                                                              tCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGaaa                                      >  2:1677305/1‑100 (MQ=255)
                                                               cctgcgcgacggatagggcGTTTACGCCGCATCCGGCctacatgacgttgcaatttattgaatctgaatgattttttaggccaaataaggtgcgcagcac                                      >  2:3285280‑M2/10‑37 (MQ=255)
                                                                aTGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATc                                    >  1:1846057/1‑100 (MQ=255)
                                                                 tGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGTCGAGCGGaaaggt                                   <  1:2948261/100‑4 (MQ=38)
                                                                  gTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCAt                                  >  1:3240941/1‑100 (MQ=255)
                                                                  gTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGTCGAGCGGaaaggtt                                  <  1:3019654/100‑5 (MQ=37)
                                                                   tAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGTCGAGCGGaaaggtta                                 <  2:849817/100‑6 (MQ=37)
                                                                   gatgCCGGATGCGGCGTAAACGCCCTATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATg                                 >  1:1368484/4‑100 (MQ=25)
                                                                    aGGCCGGATAGGGCGTTTACGCCGCATCCGGCctacatgacgttgcaatttattgaatctgaatgattttttaggccaaataaggtgcgcagcaccgcat                                 <  1:2830761‑M2/100‑69 (MQ=255)
                                                                    aGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATgg                                >  1:1746929/1‑100 (MQ=255)
                                                                    aGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATgg                                <  1:100171/100‑1 (MQ=255)
                                                                     ggCCGGATAGGGCGTTTACGCCGCATCCGGCctacatgacgttgcaatttattgaatctgaatgattttttaggccaaataaggtgcgcagcaccgcatc                                <  1:1034354‑M2/100‑70 (MQ=255)
                                                                     ggCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGt                               <  2:1686081/100‑1 (MQ=255)
                                                                     ggCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGt                               >  2:2795324/1‑100 (MQ=255)
                                                                       ccGGATAGGGCGTTTACGCCGCATCCGGCctacatgacgttgcaatttattgaatctgaatgattttttaggccaaataaggtgcgcagcaccgcatccg                              <  1:1069672‑M2/100‑72 (MQ=255)
                                                                       ccGGATAGGGCGTTTACGCCGCATCCGGCctacatgacgttgcaatttattgaatctgaatgattttttaggccaaataaggtgcgcagcaccgcatccg                              <  2:2851903‑M2/100‑72 (MQ=255)
                                                                        cGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGAc                            >  2:3206580/1‑100 (MQ=255)
                                                                        cGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGAc                            <  2:1394424/100‑1 (MQ=255)
                                                                        cGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGAc                            <  1:2471390/100‑1 (MQ=255)
                                                                        cGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGAc                            >  1:2983923/1‑100 (MQ=255)
                                                                        cGGATAGAGCGTTTACGCCGCATCCGTCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTg                              <  1:1289357/98‑1 (MQ=255)
                                                                         ggATAGGGCGTTTACGCCGCATCCGGCctacatgacgttgcaatttattgaatctgaatgattttttaggccaaataaggtgcgcagcaccgcatccggc                            <  1:1432385‑M2/100‑74 (MQ=255)
                                                                         ggATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACa                           >  1:428518/1‑100 (MQ=255)
                                                                         ggATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACa                           >  2:3649125/1‑100 (MQ=255)
                                                                          gATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACaa                          <  1:3261880/100‑1 (MQ=255)
                                                                              gggCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAgg                      >  2:231202/1‑100 (MQ=255)
                                                                              gggCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAgg                      >  1:242091/1‑100 (MQ=255)
                                                                              gggCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAg                       >  2:2978576/1‑99 (MQ=255)
                                                                              aggCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCAACGGAAATCATGGTGACaaaa                        >  1:3263482/2‑98 (MQ=255)
                                                                               ggCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGa                     >  2:533811/1‑100 (MQ=255)
                                                                                    ttACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGa                     >  1:2265256/1‑95 (MQ=255)
                                                                                    ttACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCg                <  2:2255301/100‑1 (MQ=255)
                                                                                      aCGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGtt              >  2:625069/1‑100 (MQ=255)
                                                                                       cgccgcATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTg             <  2:1448773/100‑1 (MQ=255)
                                                                                        gccgcATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGc            >  2:1935247/1‑100 (MQ=255)
                                                                                        gccgcATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGc            <  2:1602935/100‑1 (MQ=255)
                                                                                        gccgcATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGc            <  2:310596/100‑1 (MQ=255)
                                                                                         ccgcATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGcc           <  1:2764551/100‑1 (MQ=255)
                                                                                         ccgcATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGcc           >  1:1524745/1‑100 (MQ=255)
                                                                                            cATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACg        >  2:2254139/1‑100 (MQ=255)
                                                                                             aTCCGGCctacatgacgttgcaatttattgaatctgaatgattttttaggccaaataaggtgcgcagcaccgcatccggcaacgttacaccgactccagc        >  2:1536205‑M2/1‑7 (MQ=255)
                                                                                               ccGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGa     <  2:1057817/100‑1 (MQ=255)
                                                                                                 ggCctacatgacgttgcaatttattgaatctgaatgattttttaggccaaataaggtgcgcagcaccgcatccggcaacgttacaccgactccagccggg    >  2:3511738‑M2/1‑3 (MQ=255)
                                                                                                 ggCctacatgacgttgcaatttattgaatctgaatgattttttaggccaaataaggtgcgcagcaccgcatccggcaacgttacaccgactccagccggg    >  1:1674136‑M2/1‑3 (MQ=255)
                                                                                                  gCctacatgacgttgcaatttattgaatctgaatgattttttaggccaaataaggtgcgcagcaccgcatccggcaacgttacaccgactccagccgggc   <  1:373988‑M2/100‑99 (MQ=255)
                                                                                                  gCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGATTg  <  1:2176545/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGATGCGGTGCTGCGCACCTTATTTGGCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGATTG  >  NC_000913/4000153‑4000350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.