BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4332016 =	NA (NA)	6 (0.050)	4/160	NT	NA	noncoding (3/32 nt)	REP326 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP326 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	4332047 =	NA (NA)	6 (0.050)	4/160	NT	NA	intergenic (+43/‑69)	proP/pmrR	proline/glycine betaine transporter/putative membrane‑bound BasS regulator

Only 100 of 163 total aligned reads displayed.

ATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAAC  >  NC_000913/4331949‑4332144

aTTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAAt                                                                                                    <  2:1666802/100‑1 (MQ=255)

  ccctcctccgttaacctggaggagagtatgcgcgtcagagattaagtgaaccttaagagttcaatTGGCCTGATGTGACGCTGTCTTATCAGGCCAATTg                                                                                                  >  2:2921400‑M1/66‑100 (MQ=255)

     tcctccgttaacctggaggagagtatgcgcgtcagagattaagtgaaccttaagagttcaatTGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAAc                                                                                               >  1:399791‑M1/63‑100 (MQ=255)

     cAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAAc                                                                                               <  2:677620/100‑1 (MQ=255)

     cAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAAc                                                                                               <  1:2928521/100‑1 (MQ=255)

     cAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAAc                                                                                               <  2:2043172/100‑1 (MQ=255)

     cAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAAc                                                                                               <  2:3578468/100‑1 (MQ=255)

     cAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAAc                                                                                               <  1:3198702/100‑1 (MQ=255)

       ggCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActc                                                                                             <  1:510452/100‑1 (MQ=255)

       ggCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActc                                                                                             <  1:1407830/100‑1 (MQ=255)

       ggCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActc                                                                                             >  1:1627729/1‑100 (MQ=255)

        gCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActct                                                                                            >  2:624918/1‑100 (MQ=255)

            aaCGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAg                                                                                        <  1:2007167/100‑1 (MQ=255)

            aaCGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCAAATTGAACTCTTAAg                                                                                        >  2:3648731/1‑100 (MQ=255)

             aCGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAgg                                                                                       <  2:151415/100‑1 (MQ=255)

                tACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTc                                                                                    <  2:2726035/100‑1 (MQ=255)

                  cccGCCTGGTGCAGCAACATCCGCGAATTGATGAATCAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCCGGCCAATTGCACTCTTAAGGTTCAc                                                                                  >  1:1645478/1‑100 (MQ=255)

                  cccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCAc                                                                                  <  2:1835789/100‑1 (MQ=255)

                  cccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCAc                                                                                  >  2:1172508/1‑100 (MQ=255)

                  cccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCAc                                                                                  <  2:3165244/100‑1 (MQ=255)

                   ccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACt                                                                                 <  2:1299468/100‑1 (MQ=255)

                    cGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACtt                                                                                >  2:3595804/1‑100 (MQ=255)

                     gCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTa                                                                               <  1:2037243/100‑1 (MQ=255)

                      ccTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTaa                                                                              <  1:3508101/100‑1 (MQ=255)

                       cTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAt                                                                             <  2:2994872/100‑1 (MQ=255)

                        tGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAtc                                                                            <  1:1280122/100‑1 (MQ=255)

                        tGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAtc                                                                            <  1:1771799/100‑1 (MQ=255)

                         ggTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAtct                                                                           >  1:3132052/1‑100 (MQ=255)

                         ggTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAtct                                                                           >  2:2907027/1‑100 (MQ=255)

                         ggTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGCTCACTTAAtct                                                                           >  1:256142/1‑100 (MQ=255)

                          gTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAtc                                                                            <  1:2300997/98‑1 (MQ=255)

                            gcagcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTg                                                                        <  1:3015728/100‑1 (MQ=255)

                               gcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTACTCTCTGAc                                                                      >  1:3173055/1‑99 (MQ=255)

                                  aCATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACgcgc                                                                  <  1:3437017/100‑1 (MQ=255)

                                  aCATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACgcgc                                                                  >  2:2090222/1‑100 (MQ=255)

                                      ccGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATAc                                                              <  2:2698245/100‑1 (MQ=255)

                                         cgAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATActct                                                           <  2:2554889/100‑1 (MQ=255)

                                         cgAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATActct                                                           <  1:1281476/100‑1 (MQ=255)

                                           aaTTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTctcc                                                         >  2:3103968/1‑100 (MQ=255)

                                                atgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAg                                                    <  2:1722142/100‑1 (MQ=255)

                                                 tgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAgg                                                   >  2:578305/1‑100 (MQ=255)

                                                 tgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAgg                                                   >  2:2883135/1‑100 (MQ=255)

                                                   aaTAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGtt                                                 >  1:694859/1‑100 (MQ=255)

                                                    aTAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTa                                                >  2:2708638/1‑100 (MQ=255)

                                                    aTAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTATCCTCCAGGtt                                                 >  1:1891866/1‑99 (MQ=255)

                                                     tAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTaa                                               >  2:1058736/1‑100 (MQ=255)

                                                      aaGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAc                                              >  2:2876128/1‑100 (MQ=255)

                                                       atcTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTCAGGTTCACTTAATCTCTGACGCGCATACTCCCCTCCAGGTTAAC‑‑g                                           <  2:2134266/98‑1 (MQ=255)

                                                       aGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAcn                                             <  1:1027794/100‑2 (MQ=255)

                                                       aGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑g                                           >  2:2570090/1‑100 (MQ=255)

                                                       aGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑g                                           >  2:2054489/1‑100 (MQ=255)

                                                        gCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑gg                                          <  1:315679/100‑1 (MQ=255)

                                                        gCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑gg                                          >  1:3578576/1‑100 (MQ=255)

                                                         cTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑gga                                         >  2:3390755/1‑100 (MQ=255)

                                                          tGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggag                                        <  1:837873/100‑1 (MQ=255)

                                                           gAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggaag                                       >  2:3281039/1‑98 (MQ=255)

                                                           gAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCCCCTCCAGGTTAAC‑‑gagat                                       >  1:2134253/1‑96 (MQ=255)

                                                           gAAACGGATGGCCAGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggagg                                       >  1:2294345/1‑100 (MQ=255)

                                                            gttcaattggcctgataagacagcgtcacatcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggagga                                      >  2:695782‑M2/39‑100 (MQ=255)

                                                            aaaCGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCACACTCTCCTCCAGGTTAAC‑‑ggagga                                      <  1:3061324/100‑1 (MQ=255)

                                                                ggATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGt                                  >  2:3565643/1‑100 (MQ=255)

                                                                ggATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGt                                  >  2:434796/1‑100 (MQ=255)

                                                                 gATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTg                                 >  1:3592881/1‑100 (MQ=255)

                                                                 gATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCC‑‑GTTAACCTGGAGGAGAGt                                  <  1:378486/99‑1 (MQ=38)

                                                                  aTGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACGCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGc                                <  1:2502399/100‑1 (MQ=255)

                                                                   tggcctgataagacagcgtcacatcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCa                               >  2:2114842‑M2/32‑100 (MQ=255)

                                                                   tggcctgataagacagcgtcacatcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTACAGGTTAAC‑‑GGAGGAGAGTGCa                               >  1:2622595‑M2/32‑100 (MQ=255)

                                                                   tGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCC‑‑GTTAACCTGGAGGAGAGtatg                               <  2:1064900/100‑4 (MQ=37)

                                                                   TGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCa                               <  1:586480‑M1/100‑1 (MQ=255)

                                                                    GGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCaa                              >  2:2028144‑M1/1‑100 (MQ=255)

                                                                     gcctgataagacagcgtcacatcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAAt                             >  1:3255617‑M2/30‑100 (MQ=255)

                                                                     GCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAAt                             <  1:2748812‑M1/100‑1 (MQ=255)

                                                                     GCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAAt                             >  1:2717871‑M1/1‑100 (MQ=255)

                                                                     GCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAAt                             <  2:774723‑M1/100‑1 (MQ=255)

                                                                      ccTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCC‑‑GTTAACCTGGAGGAGAGtatgcgc                            <  2:149067/100‑7 (MQ=25)

                                                                      CCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑TGAGGAGAGTCCAAt                             <  1:436536‑M1/99‑1 (MQ=255)

                                                                      CCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATg                            <  2:2843644‑M1/100‑1 (MQ=255)

                                                                      CCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATg                            >  1:2523435‑M1/1‑100 (MQ=255)

                                                                          ATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGaaaa                        >  2:1949522‑M1/1‑100 (MQ=255)

                                                                          ATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGaaaa                        >  2:1797501‑M1/1‑100 (MQ=255)

                                                                           TGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGaaaaa                       <  1:2535959‑M1/100‑1 (MQ=255)

                                                                            gtgACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGaaaaa                       >  1:577241/1‑99 (MQ=255)

                                                                            gtgACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAAc                      <  2:1292613/100‑1 (MQ=255)

                                                                              gACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCg                    <  2:3449381/100‑1 (MQ=255)

                                                                              gACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCg                    >  2:1648901/1‑100 (MQ=255)

                                                                                 gCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCgtgt                 <  2:1627737/100‑1 (MQ=255)

                                                                                  cTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGtt                >  2:683145/1‑100 (MQ=255)

                                                                                    gTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTa              <  1:1887412/100‑1 (MQ=255)

                                                                                    gTCTCATCATTCCAATTGAACTCTTAAGGTTCTCTTAATCACTGACGCACATACTCTCCTCCAGGTTACC‑‑GGATGAGAGAAAAATAAAAAACCGTGTTTa              <  1:3601900/100‑1 (MQ=255)

                                                                                      cTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATg            >  2:2465779/1‑100 (MQ=255)

                                                                                      cTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATg            >  2:2020779/1‑100 (MQ=255)

                                                                                      cTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATg            <  2:1632985/100‑1 (MQ=255)

                                                                                      cTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATg            >  2:1593059/1‑100 (MQ=255)

                                                                                          tcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACTCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAg        <  2:753704‑M2/92‑1 (MQ=255)

                                                                                             ggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGttt     >  2:848560‑M2/6‑100 (MQ=255)

                                                                                             ggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGttt     >  2:1408088‑M2/6‑100 (MQ=255)

                                                                                             ggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGttt     >  1:1194865‑M2/6‑100 (MQ=255)

                                                                                             ggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTCATGAAAGttt     >  1:2421996‑M2/6‑100 (MQ=255)

                                                                                              gccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTa    <  1:3319509‑M2/96‑1 (MQ=255)

                                                                                                caATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAAc  >  2:3285385‑M2/3‑100 (MQ=255)

ATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAAC  >  NC_000913/4331949‑4332144

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.