New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4627204102 (0.770)3 (0.030) 3/162 NT 3.0% coding (1293/1383 nt) radA DNA repair protein
?NC_000913 = 4627223 102 (0.850)coding (1312/1383 nt) radA DNA repair protein
Rejected: Frequency below cutoff threshold.

Only 100 of 130 total aligned reads displayed.

GAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATGTCG  >  NC_000913/4627124‑4627320
                                                                                                   |                                                                                                 
gagaTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAg                                                                                                   <  1:269136/100‑1 (MQ=255)
   aTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgc                                                                                                <  2:2779578‑M2/100‑4 (MQ=255)
   aTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgc                                                                                                >  1:1454596‑M2/1‑97 (MQ=255)
   aTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcg                                                                                                 <  1:3458688‑M2/99‑3 (MQ=255)
    tacgcCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgcc                                                                                               <  2:2510905‑M2/98‑5 (MQ=255)
    tCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgcc                                                                                               <  2:827519‑M2/100‑5 (MQ=255)
    tCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgcc                                                                                               <  2:1887077‑M2/100‑5 (MQ=255)
     ccGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccg                                                                                              <  1:1061035‑M2/100‑6 (MQ=255)
      cGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGGGAAACACGGGTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccgg                                                                                             >  1:295377‑M2/1‑94 (MQ=255)
      cGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccgg                                                                                             >  1:1165522‑M2/1‑94 (MQ=255)
         ccGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAg                                                                                          >  2:532062/1‑100 (MQ=255)
           ggTGCCCAGCGGTCAGGAACGCATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAgg                                                                                         >  1:1144268/1‑99 (MQ=255)
           ggTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCAATGGTTCCGTCGGCTAACGTGCCAAAAAAAGCGCCGGAAggg                                                                                        >  1:2599151/1‑100 (MQ=255)
               cccAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGc                                                                                    <  2:1241623/100‑1 (MQ=255)
               cccAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGc                                                                                    >  1:1241617/1‑100 (MQ=255)
               cccAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGc                                                                                    <  2:3228398/100‑1 (MQ=255)
               cccAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCGAACGTGCCAAAAAAAGCGCCGGAAGGGATGc                                                                                    >  1:2490559/1‑100 (MQ=255)
                ncAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCa                                                                                   >  2:2256346/2‑100 (MQ=255)
                 cAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAg                                                                                  <  2:3246665/100‑1 (MQ=255)
                  aGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGAtagatc                                                                                 >  1:3388460/1‑95 (MQ=255)
                      gTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGAtttt                                                                             >  2:1756871/1‑100 (MQ=255)
                      gTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGAtttt                                                                             >  1:763478/1‑100 (MQ=255)
                      gTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTGCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGAtttt                                                                             <  1:1111799/100‑1 (MQ=255)
                      gTCAGGAACGAATCTCTGAAGCGGCGAAACAAGGTTTTCGCCGGGCGATTGTTCAGGCGGCTAAGGTGACGAAAAAAGCGCCGGAAGGGCTGCAGAtttt                                                                             >  1:2277108/1‑100 (MQ=255)
                        cAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTg                                                                           <  2:3393873/100‑1 (MQ=255)
                        cAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTg                                                                           <  1:471654/100‑1 (MQ=255)
                        cAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTg                                                                           <  2:367974/100‑1 (MQ=255)
                         aGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTgg                                                                          >  1:658040/1‑100 (MQ=255)
                          ggAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGc                                                                         >  2:3089908/1‑100 (MQ=255)
                            aaCGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCg                                                                        >  1:3671905/1‑99 (MQ=255)
                              cGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTa                                                                     <  2:684086/100‑1 (MQ=255)
                               gAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTaa                                                                    >  2:1453322/1‑100 (MQ=255)
                                aaTCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTaaa                                                                   >  2:815891/1‑100 (MQ=255)
                                aaTCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGACGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTaaa                                                                   <  1:2897621/100‑1 (MQ=255)
                                 aTCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTaaaa                                                                  >  1:2922442/1‑100 (MQ=255)
                                   ctctGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTaaaaaa                                                                >  1:2864018/1‑100 (MQ=255)
                                    tctGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAAc                                                               <  2:1950093/100‑1 (MQ=255)
                                    tctGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAAc                                                               >  1:1014840/1‑100 (MQ=255)
                                    tctGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAAc                                                               >  2:130574/1‑100 (MQ=255)
                                    tctGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAAc                                                               <  2:403306/100‑1 (MQ=255)
                                    tctGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAAc                                                               <  2:644612/100‑1 (MQ=255)
                                    tctGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAAc                                                               >  1:1611402/1‑100 (MQ=255)
                                     gtGAAGCGGCGAAACACGGTGTTCGCCGGGTGATTGTTACGGCGGCTAACGTTTCGACAAAAGCGCCGGAAGGTATGCATATTTTTGGCGTTaaaaaa                                                                >  1:2592634/2‑98 (MQ=255)
                                      tGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCGAAGGGGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAAc                                                               <  1:1075067/98‑1 (MQ=255)
                                       gAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAActct                                                            >  1:1809214/1‑100 (MQ=255)
                                         aGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTcc                                                          <  2:1367607/100‑1 (MQ=255)
                                            ggcgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAc                                                       >  2:2733684/1‑100 (MQ=255)
                                            ggcgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAc                                                       <  2:2930651/100‑1 (MQ=255)
                                             gcgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcg                                                      <  2:2058043/100‑1 (MQ=255)
                                             gcgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcg                                                      >  2:205278/1‑100 (MQ=255)
                                             gcgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcg                                                      <  1:605587/100‑1 (MQ=255)
                                              cgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcgc                                                     >  2:2621832/1‑100 (MQ=255)
                                               gAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcgcg                                                    >  1:383876/1‑100 (MQ=255)
                                                    acGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAg                                               <  2:1809225/100‑1 (MQ=255)
                                                     cGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGc                                              >  2:886917/1‑100 (MQ=255)
                                                     cGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGc                                              >  1:2192815/1‑100 (MQ=255)
                                                      ggTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAgtg                                             <  2:3428165/100‑3 (MQ=255)
                                                      ggTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCg                                             <  2:2193013/100‑1 (MQ=255)
                                                       gTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCgt                                            >  1:2395671/1‑100 (MQ=255)
                                                        ttttCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAACCTCTCCGACGCGCTTAGCgtg                                           <  1:1760149/100‑1 (MQ=255)
                                                          ttCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGtt                                         >  2:2740932/1‑100 (MQ=255)
                                                           tCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTc                                        <  2:2922463/100‑1 (MQ=255)
                                                            cGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcg                                       <  2:2966054/100‑1 (MQ=255)
                                                            cGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcg                                       <  2:3027002/100‑1 (MQ=255)
                                                             gCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcga                                      <  2:53260/100‑1 (MQ=255)
                                                             gCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcga                                      >  2:2411326/1‑100 (MQ=255)
                                                              ccGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgac                                     >  1:2974883/1‑100 (MQ=255)
                                                              ccGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgac                                     >  2:1639761/1‑100 (MQ=255)
                                                               cGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgacg                                    <  1:2374461/100‑1 (MQ=255)
                                                               cGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgacg                                    <  1:2870243/100‑1 (MQ=255)
                                                                  gCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACt                                 <  1:2646732/100‑1 (MQ=255)
                                                                   cGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACtt                                <  2:2718164/100‑1 (MQ=255)
                                                                    gATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACt                                 >  1:2237565/1‑98 (MQ=255)
                                                                    gATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTta                               <  2:2080231/100‑1 (MQ=255)
                                                                     aTTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTtat                              <  1:3204651/100‑1 (MQ=255)
                                                                      ttGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTtata                             >  2:3416530/1‑100 (MQ=255)
                                                                        gTTCCGGCGGCTAACGTGCCGAAAAAAGcgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcacc                             <  1:3071413‑M2/98‑71 (MQ=255)
                                                                        gTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAAt                           <  1:2748792/100‑1 (MQ=255)
                                                                         ttCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATg                          <  2:658045/100‑1 (MQ=255)
                                                                            cggcggCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATgaga                       >  2:1008764/1‑100 (MQ=255)
                                                                             ggcggcTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATga                         <  1:2935259/97‑1 (MQ=255)
                                                                                 gcTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATAc                  >  1:900785/1‑100 (MQ=255)
                                                                                  cTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATAc                  <  1:2889204/99‑1 (MQ=255)
                                                                                    aaCGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACgga               >  1:2107193/1‑100 (MQ=255)
                                                                                    aaCGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACgga               >  1:400547/1‑100 (MQ=255)
                                                                                    aaCGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACgga               >  2:3279185/1‑100 (MQ=255)
                                                                                        tGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACggagggg           <  1:2387122/100‑2 (MQ=255)
                                                                                          ccGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGgaga         >  2:2584389/1‑100 (MQ=255)
                                                                                           cGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGgaga         >  1:1007839/1‑99 (MQ=255)
                                                                                           cGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGat        <  1:2641596/100‑1 (MQ=255)
                                                                                           cGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGat        >  2:1182075/1‑100 (MQ=255)
                                                                                            gAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGata       <  1:633067/100‑1 (MQ=255)
                                                                                              aaataGCGCCGGAAGGGATACAGATTTTTTGCATTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGTCGACTTATAATGATATATACGGTGGgtgaca       >  1:847706/1‑96 (MQ=255)
                                                                                              aaaaaGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATg     <  2:2863337/100‑1 (MQ=255)
                                                                                                aaaGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATgtc   <  1:818908/100‑1 (MQ=255)
                                                                                                aaaGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATgtc   <  2:1613639/100‑1 (MQ=255)
                                                                                                 aaGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATgtcg  >  1:249284/1‑100 (MQ=255)
                                                                                                 aaGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATgtcg  <  2:1641768/100‑1 (MQ=255)
                                                                                                  ngcgcCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATgt    >  1:1253371/2‑97 (MQ=255)
                                                                                                  aGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATgtcg  <  2:2680652/99‑1 (MQ=255)
                                                                                                   |                                                                                                 
GAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATGTCG  >  NC_000913/4627124‑4627320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.