New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 277706NA (NA)12 (0.100) 6/164 NT NA noncoding (32/67 nt) REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 277737 NA (NA)noncoding (63/67 nt) REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 181 total aligned reads displayed.

GCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACG  >  NC_000913/277638‑277836
                                                                                                   |                                                                                                   
gcgAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGC                                                                                                     >  1:808884‑M2/1‑100 (MQ=255)
gcgAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGC                                                                                                     >  2:1909176‑M2/1‑100 (MQ=255)
gcgAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGC                                                                                                     >  1:1687081‑M2/1‑100 (MQ=255)
 cgAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGcc                                                                                                    <  1:504566/100‑1 (MQ=255)
 cgAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGcc                                                                                                    <  2:375954/100‑1 (MQ=255)
 cgAAGCTGAGGGTTTATCGGGTCTACATCGTGCATTGTAGGCCTGGTAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGcc                                                                                                    <  1:3281670/100‑1 (MQ=255)
  gAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCt                                                                                                   <  2:777231/100‑1 (MQ=255)
     gCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACa                                                                                                >  1:745924/1‑100 (MQ=255)
       tGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACaaa                                                                                              >  1:3024906/1‑100 (MQ=255)
         aGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAc                                                                                            <  2:3696178/100‑1 (MQ=255)
         aGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAc                                                                                            <  2:2458816/100‑1 (MQ=255)
         aGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAc                                                                                            <  1:3320632/100‑1 (MQ=255)
          ggggTTGTCGGGTCTACATCGGTCAGTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCAGATGGCGGCACAAGCGCGTTATCCGGCCTACAAAAcc                                                                                           <  1:2894172/100‑1 (MQ=37)
          gggTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAcc                                                                                           <  1:308719/100‑1 (MQ=255)
          gggTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAcc                                                                                           <  1:308468/100‑1 (MQ=255)
          gggTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAcc                                                                                           <  2:976328/100‑1 (MQ=255)
           ggTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACca                                                                                          <  1:1251107/100‑1 (MQ=255)
            gTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATTGCGGCACAAGCGCCTTATCCGGCCTACAAAACca                                                                                          <  1:1009970/99‑1 (MQ=255)
             tttATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACcaca                                                                                        <  2:515034/100‑1 (MQ=255)
              ttATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATAAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACaa                                                                                       >  1:628215/1‑100 (MQ=255)
                aTCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACaaaa                                                                                     >  2:1812875/1‑100 (MQ=255)
                 tCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgc                                                                                    >  1:3478667‑M2/1‑83 (MQ=255)
                    ggTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGtt                                                                                 <  1:639248/100‑1 (MQ=255)
                     gTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTa                                                                                <  2:55955/100‑1 (MQ=255)
                        tACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGc                                                                             <  2:1098306/100‑1 (MQ=255)
                         aCATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGcc                                                                            >  2:2558984/1‑100 (MQ=255)
                          cATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCg                                                                           <  1:2391091/100‑1 (MQ=255)
                             cGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCa                                                                         >  2:3329538/1‑99 (MQ=255)
                              gTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATc                                                                       >  1:2896157/1‑100 (MQ=255)
                              gTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATc                                                                       >  1:1137266/1‑100 (MQ=255)
                                tCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCg                                                                     >  2:1094102/1‑100 (MQ=255)
                                tCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCg                                                                     >  2:126590/1‑100 (MQ=255)
                                tCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCg                                                                     >  2:562622/1‑100 (MQ=255)
                                  aTTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGcc                                                                   <  2:1667994/100‑1 (MQ=255)
                                  aTTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGcc                                                                   <  2:3212016/100‑1 (MQ=255)
                                     gTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGa                                                                >  1:2058098/1‑100 (MQ=255)
                                     gTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGCTATGCCGCATCCGcc                                                                   >  1:1084409/1‑97 (MQ=255)
                                       aGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaac                                                              >  1:2176229/1‑100 (MQ=255)
                                        ggCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaaca                                                             <  2:633167/100‑1 (MQ=255)
                                        ggCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaaca                                                             >  2:2958499/1‑100 (MQ=255)
                                         gCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaaca                                                             >  1:2697730/1‑99 (MQ=255)
                                           cTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaac                                                          <  2:2741270/100‑1 (MQ=255)
                                                  gcgcagcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGt                                                   >  1:3630248/1‑100 (MQ=255)
                                                  gcgcagcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGt                                                   <  1:1761373/100‑1 (MQ=255)
                                                    gcagcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTAc                                                 <  2:3598347/100‑1 (MQ=255)
                                                     cagcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTagg                                                >  1:2244238/1‑98 (MQ=255)
                                                     cagcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACg                                                <  2:1325225/100‑1 (MQ=255)
                                                      agcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACgg                                               <  2:1840698/100‑1 (MQ=255)
                                                       gcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACgga                                              <  2:353300/100‑1 (MQ=255)
                                                       cgccaTCCGGCAATGCCTGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACgga                                              >  2:254498/4‑100 (MQ=38)
                                                         gcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCAGCATACGCCAGAACACACATGCCGTACggatg                                            >  1:354229/1‑100 (MQ=255)
                                                          caTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatgg                                           >  1:1596586/1‑100 (MQ=255)
                                                          caTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatgg                                           <  1:2477849/100‑1 (MQ=255)
                                                           aTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatgga                                          <  1:1684528/100‑1 (MQ=255)
                                                           aTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatgga                                          >  1:3045292/1‑100 (MQ=255)
                                                            tCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatgga                                          >  1:1467040/1‑99 (MQ=255)
                                                             cAGGCATTGCCGGATGGTGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGAtt                                        >  2:1846610/1‑100 (MQ=255)
                                                             cAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGAtt                                        >  2:1005094/1‑100 (MQ=255)
                                                              aGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGAttt                                       >  1:934510/1‑100 (MQ=255)
                                                               ggCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTc                                      >  2:1138401/1‑100 (MQ=255)
                                                                gCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCa                                     <  2:155860/100‑1 (MQ=255)
                                                                  aTTGCCGGATGGTGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAg                                   <  2:259539/100‑1 (MQ=255)
                                                                  aTTGCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagct                                    <  1:369400‑M2/99‑66 (MQ=255)
                                                                   ttGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGa                                  <  1:2558970/100‑1 (MQ=255)
                                                                   ttGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGa                                  >  1:295635/1‑100 (MQ=255)
                                                                   ttGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGa                                  <  1:1318473/100‑1 (MQ=255)
                                                                     gCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcagtcctacaatgaacgacgtagacccgataaaccctcagctt                                   <  1:1537946‑M2/97‑67 (MQ=255)
                                                                     gCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttcgc                                <  2:284874‑M2/100‑70 (MQ=255)
                                                                     gCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGata                                >  2:1468214/1‑100 (MQ=255)
                                                                     gCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGata                                >  2:2235552/1‑100 (MQ=255)
                                                                      ccGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttcgcg                               <  1:2307178‑M2/100‑71 (MQ=255)
                                                                      ccGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGataa                               >  1:1931724/1‑100 (MQ=255)
                                                                       cGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGataat                              <  2:3024928/100‑1 (MQ=255)
                                                                       cGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGataan                              <  1:1912501/100‑2 (MQ=255)
                                                                          aTGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACt                           <  2:2244251/100‑1 (MQ=255)
                                                                          aTGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTACAAGATAATACt                           <  1:438470/100‑1 (MQ=255)
                                                                              cggcACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTc                       <  2:2876957/100‑1 (MQ=255)
                                                                               ggcACAAGCGCCTTATCCGGCCTAGAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTc                       <  1:1183388/99‑1 (MQ=255)
                                                                               ggcACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCt                        >  2:896991/1‑98 (MQ=255)
                                                                                 cacaAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGcc                    >  1:3423050/1‑100 (MQ=255)
                                                                                   caAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGACCAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCg                   <  1:2401086/99‑1 (MQ=255)
                                                                                    aaGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGAc                 >  2:464873/1‑100 (MQ=255)
                                                                                    aaGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGAc                 <  2:2292835/100‑1 (MQ=255)
                                                                                     aGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACg                <  2:2687931/100‑1 (MQ=255)
                                                                                      gcgcCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGt               >  2:3358737/1‑100 (MQ=255)
                                                                                        gccgtgtacGGCGTACTAAACCACAACATGTTATGCAGCATCCGCTAGAACAAACATGCAGTACGGTTGGTTTTCAAGATAATACTGCTCGCCGACg                <  1:2011349/89‑1 (MQ=255)
                                                                                         ccTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCg            <  1:1812864/100‑1 (MQ=255)
                                                                                           ttATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGt          <  2:2834729/100‑1 (MQ=255)
                                                                                            tATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGtt         >  2:1323471/1‑100 (MQ=255)
                                                                                             aTCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTg        <  1:1193633/100‑1 (MQ=255)
                                                                                             aTCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTg        <  1:764827/100‑1 (MQ=255)
                                                                                               ccGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttcgcgcttttaacgcggcgatatccgcagg      <  2:2357208‑M2/100‑96 (MQ=255)
                                                                                               ccGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttcgcgcttttaacgcggcgatatccgcagg      <  2:3075739‑M2/100‑96 (MQ=255)
                                                                                               ccGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACGTGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCa      <  2:1076776/100‑1 (MQ=255)
                                                                                                 ggCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttcgcgcttttaacgcggcgatatccgcaggcg    >  2:3334864‑M2/1‑3 (MQ=255)
                                                                                                 ggCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttcgcgcttttaacgcggcgatatccgcaggcg    <  2:2187591‑M2/100‑98 (MQ=255)
                                                                                                 ggCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAg     <  1:782163/99‑1 (MQ=255)
                                                                                                 ggCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGa    >  2:587766/1‑100 (MQ=255)
                                                                                                   ccTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGAcg  >  1:72859/1‑100 (MQ=255)
                                                                                                   ccTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGAcg  <  2:1184112/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACG  >  NC_000913/277638‑277836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.