BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	377335 =	NA (NA)	11 (0.090)	6/164	NT	NA	noncoding (1/187 nt)	REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences	REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences
*	?	NC_000913	377368 =	NA (NA)	11 (0.090)	6/164	NT	NA	noncoding (34/187 nt)	REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences	REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 210 total aligned reads displayed.

CCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGG  >  NC_000913/377269‑377466

tggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtagGCCTGATGCGACGCTATGCGCGTCTTATCAGGcc                                                                                                    >  1:40976‑M1/67‑100 (MQ=255)

cccGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGcc                                                                                                    <  1:368047/100‑1 (MQ=255)

cccGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGcc                                                                                                    >  1:3371927/1‑100 (MQ=255)

     aTGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACgg                                                                                               >  2:2901840/1‑100 (MQ=255)

      tGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGt                                                                                              <  2:2824392/100‑1 (MQ=255)

        ccGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGttt                                                                                            >  1:25071/1‑100 (MQ=255)

        ccGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGttt                                                                                            >  2:3568587/1‑100 (MQ=255)

        ccGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGttt                                                                                            >  2:703941/1‑100 (MQ=255)

         cGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTa                                                                                           >  2:78711/1‑100 (MQ=255)

           aCTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATCCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATg                                                                                         <  1:1976016/100‑1 (MQ=255)

            gccggatgcggcgtgaacgccttagccggtctacacttcgcccataaaccgtagGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATg                                                                                         >  2:132064‑M1/55‑99 (MQ=255)

            cTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATgg                                                                                        <  1:754480/100‑1 (MQ=255)

             ttCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGTCTGATGCGACGGTATGCGCGTCTTATCAGGCCTACGGTTTATggg                                                                                       <  1:154141/100‑1 (MQ=255)

             ttCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATggg                                                                                       <  2:3341538/100‑1 (MQ=255)

               cAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCg                                                                                     <  1:2880042/100‑1 (MQ=255)

               cAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCg                                                                                     >  1:239024/1‑100 (MQ=255)

                 aaGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGaa                                                                                   <  1:1735799/100‑1 (MQ=255)

                   gTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAgt                                                                                 <  2:3009900/100‑1 (MQ=255)

                     gCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAgtgt                                                                               >  2:928509/1‑100 (MQ=255)

                     gCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAgtgt                                                                               >  1:2177387/1‑100 (MQ=255)

                       cTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAg                                                                             >  1:2864594/1‑100 (MQ=255)

                         gatgatTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAg                                                                             <  1:2239541/98‑1 (MQ=255)

                         gatgatTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGAc                                                                           <  2:2086138/100‑1 (MQ=255)

                          atgatTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGAcc                                                                          <  2:3095475/100‑1 (MQ=255)

                           tgatTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCg                                                                         <  1:351381/100‑1 (MQ=255)

                           tgatGTTATGTGGTAAACATAGATAAGTCGTGCGGAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGAc                                                                           <  1:3386066/98‑1 (MQ=255)

                            gatTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCgg                                                                        >  2:3148463/1‑100 (MQ=255)

                            gatTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCgg                                                                        >  2:245793/1‑100 (MQ=255)

                            gatTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCgg                                                                        >  2:2045319/1‑100 (MQ=255)

                            gatTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCgg                                                                        <  2:3280474/100‑1 (MQ=255)

                            gatTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCgg                                                                        >  1:3470278/1‑100 (MQ=255)

                            gatTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCgg                                                                        >  1:3373474/1‑100 (MQ=255)

                             atTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGa                                                                       >  2:465307/1‑100 (MQ=255)

                              tttGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGAt                                                                      >  2:874877/1‑100 (MQ=255)

                               ttGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATa                                                                     <  1:944870/100‑1 (MQ=255)

                               ttGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATa                                                                     <  1:882148/100‑1 (MQ=255)

                               ttGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGGTTATGGGCGAAGTGTAGACCGGATa                                                                     >  1:2040586/1‑100 (MQ=255)

                                 gATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAg                                                                   <  2:3247483/100‑1 (MQ=255)

                                 gATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAg                                                                   <  2:89048/100‑1 (MQ=255)

                                 gATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAg                                                                   >  1:1260170/1‑100 (MQ=255)

                                 gATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAg                                                                   <  1:3148439/100‑1 (MQ=255)

                                      ggTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGtt                                                              >  1:69762/1‑100 (MQ=255)

                                      ggTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGtt                                                              >  1:3667277/1‑100 (MQ=255)

                                      ggTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGtt                                                              >  2:2241646/1‑100 (MQ=255)

                                      ggTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGtt                                                              >  2:3561431/1‑100 (MQ=255)

                                      ggTAAACATAGATAAGTCGTGCACAGATGCCTGATGCGACGCTATGCGCGTCTTATCATGCCTACGGTTGATGGGCGAAGTGTAGACCGAATAAGGCGtt                                                              >  1:2154138/1‑100 (MQ=21)

                                        tAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCa                                                            >  1:1069396/1‑100 (MQ=255)

                                           aCATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCAcgc                                                         >  2:2152290/1‑100 (MQ=255)

                                              tAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCAcgccgc                                                      <  1:992147/100‑1 (MQ=255)

                                              tAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCAcgccgc                                                      >  1:2988651/1‑100 (MQ=255)

                                              tAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACAGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCAcgccgc                                                      <  1:1336/100‑1 (MQ=255)

                                               aGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCa                                                     <  1:2931878/100‑1 (MQ=255)

                                                  tAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATcc                                                  <  2:239024/100‑1 (MQ=255)

                                                    cccataaaccgtaggcctgataagacgcgcatagcgtcgcatcaggcCTACGGTTTGTGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCgg                                                >  2:3291966‑M2/48‑100 (MQ=255)

                                                     gTCGTGCGCAGATGCCTGATGCGACGCTCTGCGCGTCTTAGCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGc                                               >  2:1256272/1‑100 (MQ=255)

                                                     gTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGc                                               >  1:1380818/1‑100 (MQ=255)

                                                     gTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGc                                               <  2:3000469/100‑1 (MQ=255)

                                                     gTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGc                                               <  2:2176611/100‑1 (MQ=255)

                                                     gTCGTGCGCAGATGCCGGAGGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATGCGGCGTGAACGCCTTATCCggt                                               <  1:534627/100‑2 (MQ=17)

                                                        gTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGt                                            <  2:2560798/100‑1 (MQ=255)

                                                        gTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGt                                            >  2:2672293/1‑100 (MQ=255)

                                                         tGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGGCCGGATGCGGCGTGAACGCCTTATCCggtctac                                           <  2:743553/100‑6 (MQ=14)

                                                             cAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTgc                                       >  2:1855931/1‑100 (MQ=255)

                                                              aGATGCCTGATGCGACGTTATGCGCGTTTTATCAGGCTTTCTGTTTATGGGCGATGTGTAGACCGGATAAGGCGTTCATGCCGTATCCGGCAGTCGTgcg                                      <  1:470295/100‑1 (MQ=17)

                                                                 tGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCa                                   >  2:1552121/1‑100 (MQ=255)

                                                                  gcctgataagacgcgcatagcgtcgcatcaggcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTTCGCCa                                   >  1:2027942‑M2/34‑99 (MQ=255)

                                                                  gcctgataagacgcgcatagcgtcgcatcaggcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCAt                                  >  2:1527114‑M2/34‑100 (MQ=255)

                                                                  gcctgataagacgcgcatagcgtcgcatcaggcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCAt                                  >  2:1367468‑M2/34‑100 (MQ=255)

                                                                  gcctgataagacgcgcaaagcgtcgcatcaggcCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAgtcgtgctatta                                  >  2:2188301‑M2/34‑95 (MQ=255)

                                                                  GCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCAt                                  >  1:3305618‑M1/1‑100 (MQ=255)

                                                                   cctgataagacgcgcatagcgtcgcatcaggcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATg                                 >  2:55744‑M2/33‑100 (MQ=255)

                                                                   CCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTgc                                       <  1:153024‑M1/94‑1 (MQ=255)

                                                                   CCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATg                                 <  2:1958077‑M1/100‑1 (MQ=255)

                                                                    CTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGc                                <  2:1475240‑M1/100‑1 (MQ=255)

                                                                    CTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGc                                >  1:2672278‑M1/1‑100 (MQ=255)

                                                                    CTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGc                                >  2:110533‑M1/1‑100 (MQ=255)

                                                                     tgataagacgcgcatagcgtcgcatcaggcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGcc                               >  1:2847451‑M2/31‑100 (MQ=255)

                                                                     TGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGcc                               <  2:3584385‑M1/100‑1 (MQ=255)

                                                                      GATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCt                              >  2:1121909‑M1/1‑100 (MQ=255)

                                                                        TGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGa                            >  1:18950‑M1/1‑100 (MQ=255)

                                                                         gCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGAt                           <  1:3168849/100‑1 (MQ=255)

                                                                         gCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGAt                           <  2:3311853/100‑1 (MQ=255)

                                                                          cGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATg                          >  1:1697881/1‑100 (MQ=255)

                                                                           gACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGc                         >  1:2084687/1‑100 (MQ=255)

                                                                           gACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGc                         >  2:3406029/1‑100 (MQ=255)

                                                                            aCGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCg                        <  2:1427124/100‑1 (MQ=255)

                                                                            aCGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCg                        <  2:2864615/100‑1 (MQ=255)

                                                                              gCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGAc                      >  2:3530126/1‑100 (MQ=255)

                                                                               cTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACg                     >  2:1052748/1‑100 (MQ=255)

                                                                               cTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACg                     <  2:1343868/100‑1 (MQ=255)

                                                                               cTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACg                     >  2:1232781/1‑100 (MQ=255)

                                                                                  tGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCtt                  >  2:697444/1‑100 (MQ=255)

                                                                                   gcgcGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCttt                 <  1:1920500/100‑1 (MQ=255)

                                                                                     gcgTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTgc               <  2:3454012/100‑1 (MQ=255)

                                                                                     gcgTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTgc               <  2:2287542/100‑1 (MQ=255)

                                                                                       gTCTTATCAGGCCTACGGTTTATGGGCTAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGTGACGCTTTgcgc             <  1:2830358/100‑1 (MQ=255)

                                                                                       gTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTgcgc             >  2:833532/1‑100 (MQ=255)

                                                                                           tATCAGGCCTACGGTTTATGGGCGAAGTGTAGCCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCt         <  1:2396447/100‑1 (MQ=255)

                                                                                                ggcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCa    <  1:3530099‑M2/97‑1 (MQ=255)

                                                                                                 gcCTACGGTTTATGGCCTAAGTGTGGACCGGACAAGGCGTTGAGGCCGCATCCTGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATc     <  1:2463675‑M2/96‑1 (MQ=255)

CCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGG  >  NC_000913/377269‑377466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.