BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	409056 =	NA (NA)	11 (0.090)	7/164	NT	NA	noncoding (5/37 nt)	REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	409089 =	NA (NA)	11 (0.090)	7/164	NT	NA	intergenic (+139/+19)	ykiA/rdgC	pseudogene/nucleoid‑associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function

Only 100 of 199 total aligned reads displayed.

TATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATGAAAT  >  NC_000913/408991‑409187

tatTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCAt                                                                                                   <  1:2880283/100‑1 (MQ=255)

aattcaaaacctgattgaaggattaggtggcgaagcacaacgttaattgctgattttcctttaatGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCAt                                                                                                   >  2:1604311‑M1/66‑100 (MQ=255)

 attcaaaacctgattgaaggattaggtggcgaagcacaacgttaattgctgattttcctttaatGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCAtt                                                                                                  >  2:1332221‑M1/65‑100 (MQ=255)

 attcaaaacctgattgaaggattaggtggcgaagcacaacgttaattgctgattttcctttaatGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCAtt                                                                                                  >  2:2548584‑M1/65‑100 (MQ=255)

 attcaaaacctgattgaaggattaggtggcgaagcacaacgttaattgctgattttcctttaatGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCAtt                                                                                                  >  1:2315610‑M1/65‑100 (MQ=255)

 atTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCAtt                                                                                                  <  2:1895638/100‑1 (MQ=255)

  ttGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTAAATGCCTGGTGGGGCTTCGTCCGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTa                                                                                                 >  1:2014406/1‑100 (MQ=255)

   tgctgtGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTTTGGCTTCGTACGCCGGATAAGACGCGGCATGCGTCGCATCCGGCATTaa                                                                                                <  1:1220669/100‑1 (MQ=255)

   tgctgcGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTaa                                                                                                >  2:2794521/1‑100 (MQ=255)

     ctgcGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAg                                                                                              <  2:3275143/100‑1 (MQ=255)

     ctgcGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAg                                                                                              <  2:2850447/100‑1 (MQ=255)

      tgcGATAAACATTATTGTTCGGCGTAGCGAATAACTATAGGCATGGTGTGGCTTCGTACGGCGGATAAGACGCGTCAGGGTTCGCATCCGGCATTAAAg                                                                                              <  1:1996428/99‑1 (MQ=255)

        cgcTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGaa                                                                                           >  2:2167421/1‑100 (MQ=255)

          cTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAGAGGaaaa                                                                                         <  2:3011456/100‑1 (MQ=255)

          cTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGaaaa                                                                                         >  2:320466/1‑100 (MQ=255)

          cTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGaaaa                                                                                         >  2:1705500/1‑100 (MQ=255)

          cTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGaaaa                                                                                         >  2:349006/1‑100 (MQ=255)

          cTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGaaaa                                                                                         <  2:1148520/100‑1 (MQ=255)

          cTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGaaaa                                                                                         <  1:454916/100‑1 (MQ=255)

           tAAAAAGTATGGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCCTTAAAGGaaa                                                                                          >  1:2539248/1‑98 (MQ=255)

            aaaaaTTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATc                                                                                       >  2:1229444/1‑100 (MQ=255)

            aaaaaTTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATc                                                                                       >  2:1378049/1‑100 (MQ=255)

              aaaTTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAg                                                                                     >  1:3419895/1‑100 (MQ=255)

               aaTTATTGCTCGCCGTAGCGAATAATTATATGCCCGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGc                                                                                    <  1:1089406/100‑1 (MQ=255)

                attattGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCa                                                                                   <  2:3436347/100‑1 (MQ=255)

                 ttattGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCaa                                                                                  <  2:414160/100‑1 (MQ=255)

                   attGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAAtt                                                                                >  2:928502/1‑100 (MQ=255)

                      gCTCGCCGTAGCGGATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCCGCAATTAAc                                                                             >  1:1048083/1‑100 (MQ=255)

                      gCTCGCCATAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAAc                                                                             >  1:1937023/1‑100 (MQ=255)

                       cTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACg                                                                            <  1:681420/100‑1 (MQ=255)

                         cGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGtt                                                                          >  2:3630923/1‑100 (MQ=255)

                         cGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGtt                                                                          >  1:3662134/1‑100 (MQ=255)

                         cGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGtt                                                                          >  1:401460/1‑100 (MQ=255)

                              tAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCt                                                                     <  1:1072095/100‑1 (MQ=255)

                                gCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCTGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTc                                                                   >  2:2607171/1‑100 (MQ=255)

                                 cGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGAGTCGCATCCGGCATTAAAGGAACATCAGCAATTAACGTTGTGCTTCg                                                                  >  1:733606/1‑100 (MQ=255)

                                  gAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGc                                                                 >  2:900636/1‑100 (MQ=255)

                                      aatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCAcc                                                             <  2:646530/100‑1 (MQ=255)

                                           tatGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATc                                                        >  1:599005/1‑100 (MQ=255)

                                            atGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATc                                                        <  1:2742079/99‑1 (MQ=255)

                                              gCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCtt                                                     >  2:2455050/1‑100 (MQ=255)

                                               ccTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTc                                                    >  2:1204745/1‑100 (MQ=255)

                                               ccTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCAACATTAAAGGAAAATCAGCAATGAACGTTGTGCTTCGCCACCTAATCCTTc                                                    >  1:3137830/1‑100 (MQ=255)

                                                cTGGTGTCGCTTCGTACGCCGTATAAGACGCGGCAGGCGTCGCATCCGGCATTAAACGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCa                                                   <  1:3251438/100‑1 (MQ=255)

                                                 tGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCaa                                                  <  2:1458351/100‑1 (MQ=255)

                                                  ggTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAAt                                                 >  1:2680249/1‑100 (MQ=255)

                                                   gtgtGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATc                                                <  2:981652/100‑1 (MQ=255)

                                                   gtgtGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATc                                                <  2:3137975/100‑1 (MQ=255)

                                                   gtgtGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATc                                                >  1:2054517/1‑100 (MQ=255)

                                                    tgtgGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCa                                               >  2:532501/1‑100 (MQ=255)

                                                     ggggCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAg                                              >  2:2503759/3‑100 (MQ=255)

                                                      tgGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAgg                                             >  1:1428902/1‑100 (MQ=255)

                                                      tgGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAgg                                             <  1:3100153/100‑1 (MQ=255)

                                                        gCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGtt                                           >  1:1142640/1‑100 (MQ=255)

                                                         cttccgatctCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGttt                                          >  1:2115045‑M1/11‑100 (MQ=255)

                                                         cTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCCGGttt                                          >  1:3370054/1‑100 (MQ=255)

                                                          ctttaatgccggatgcgacgcctgccgcgtcttatccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGtttt                                         >  1:99330‑M2/41‑100 (MQ=255)

                                                           tctaatgccggatgcgacgcctgccgcgtcttatccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTg                                        <  2:863574‑M2/61‑1 (MQ=255)

                                                           tCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTg                                        <  2:255465/100‑1 (MQ=255)

                                                           tCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTg                                        <  1:2258517/100‑1 (MQ=255)

                                                           tCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTg                                        <  1:3696275/100‑1 (MQ=255)

                                                            cGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGa                                       <  2:473368/100‑1 (MQ=255)

                                                             gTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGaa                                      >  2:3333328/1‑100 (MQ=255)

                                                             gTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGaa                                      <  2:2795028/100‑1 (MQ=255)

                                                             gTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGaa                                      <  2:2611976/100‑1 (MQ=255)

                                                              tACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAt                                     <  2:450179/100‑1 (MQ=255)

                                                              aatgccggatgcgacgcctgccgcgtcttatccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTtgaga                                     >  1:863569‑M2/37‑98 (MQ=255)

                                                               aCGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAtt                                    >  2:3414193/1‑100 (MQ=255)

                                                                tgccggatgcgacgcctgccgcgtcttatccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCTCCTAATCCTTCAATCAGGTTTTGAATTa                                   >  1:3434975‑M2/35‑100 (MQ=255)

                                                                cGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTa                                   >  1:2268650/1‑100 (MQ=255)

                                                                 gccggatgcgacgcctgccgcgtcttatccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCCGGTTTTGAATTaa                                  >  2:673442‑M2/34‑100 (MQ=255)

                                                                 gccggatgcgacgcctgccgcgtcttatccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTaa                                  >  2:2303553‑M2/34‑100 (MQ=255)

                                                                 GCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTaa                                  <  2:1976147‑M1/100‑1 (MQ=255)

                                                                  CCGGATAAGACGCGGCAGGCGTCGCATCCGGTATTAAAGGAAAATCAGCAATTAACTTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTa                                   >  1:2216330‑M1/1‑98 (MQ=255)

                                                                  CCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAAc                                 >  1:701542‑M1/1‑100 (MQ=255)

                                                                  CCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAAc                                 <  1:1505081‑M1/100‑1 (MQ=255)

                                                                  CCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAAc                                 <  2:2361102‑M1/100‑1 (MQ=255)

                                                                   CGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTtcaatcaggtttagatcggaa                                 <  2:2115058‑M1/99‑10 (MQ=255)

                                                                   CGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACg                                <  1:764585‑M1/100‑1 (MQ=255)

                                                                    GGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGc                               <  2:3676347‑M1/100‑1 (MQ=255)

                                                                     GATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCt                              <  1:955975‑M1/100‑1 (MQ=255)

                                                                       TAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGc                            <  2:2889720‑M1/100‑1 (MQ=255)

                                                                         aGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCa                          >  1:13628/1‑100 (MQ=255)

                                                                          gACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAg                         <  2:1790420/100‑1 (MQ=255)

                                                                                tgccgcgtcttatccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCAcc                   >  2:2069901‑M2/19‑100 (MQ=255)

                                                                                gCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTTCCAGTTCAc                    >  1:1767559/1‑99 (MQ=255)

                                                                                gCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCAcc                   <  1:2956938/100‑1 (MQ=255)

                                                                                 cAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCa                  >  1:3185805/1‑100 (MQ=255)

                                                                                    gCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGtc               <  1:1661693/100‑1 (MQ=255)

                                                                                      gTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGtcat             >  2:241102/1‑100 (MQ=255)

                                                                                       tCGCCTCCTGCATTAAAGGACACACTGTAATTAACGTTGTGCTTCCCCACCTACTCCTTCAATCTGGTTTTGAATTAACGCTGCCAGTTCACCAGtca              <  1:2778919/98‑1 (MQ=255)

                                                                                         gCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCAACCTAATCCCTCAATCAGGACTTGACTTAACGCTGCCAGTTCACCAGtca              >  1:1924442/1‑96 (MQ=255)

                                                                                           atccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGa        >  2:536233‑M2/8‑100 (MQ=255)

                                                                                           atccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGa        >  2:1094470‑M2/8‑100 (MQ=255)

                                                                                             ccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATg      >  1:510573‑M2/6‑100 (MQ=255)

                                                                                             ccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATg      >  2:602822‑M2/6‑100 (MQ=255)

                                                                                             ccGGCATTAAAGGAAAATCAGCAATTAACGTTGTGTTTCGCCACCTAATCTTGCAATCAGGTTTTGGATTAAGTCTTCGAGTTCACCATTCATCAGGGTg      >  1:2397518/1‑100 (MQ=255)

                                                                                              cggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATGa     >  2:1527814‑M2/5‑100 (MQ=255)

                                                                                               ggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATGaa    >  1:1707785‑M2/4‑100 (MQ=255)

                                                                                                gcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATGaaa   >  2:2731986‑M2/3‑100 (MQ=255)

TATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATGAAAT  >  NC_000913/408991‑409187

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.