New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1432784	NA (NA)	3 (0.020)	3/168	NT	NA	coding (374/576 nt)	tfaR	Rac prophage; putative tail fiber assembly protein
	?	NC_000913	= 1432795	NA (NA)					coding (385/576 nt)	tfaR	Rac prophage; putative tail fiber assembly protein

AGTTTCAGAAGTGGAACGGCACAGCCTGGGTGAAGGATACGGAAGCAGAAAAACTGTTCCGGATCCGGGAGGCGGAAGAAACAAAAAACAACCTGATGC  >  NC_000913/1432724‑1432822                                                                        |                            aggttCAGAAGTGAAAAGGCACAGCCACGGTCAAGAATACAAAAAAAGAAAAACTGTTCCGTTTCCGGATGAAAAAAAAAAAAAAAAACAACCTGATGc  <  1:2385425/96‑1 (MQ=0)                                                                        |                            AGTTTCAGAAGTGGAACGGCACAGCCTGGGTGAAGGATACGGAAGCAGAAAAACTGTTCCGGATCCGGGAGGCGGAAGAAACAAAAAACAACCTGATGC  >  NC_000913/1432724‑1432822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.