New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2146653NA (NA)12 (0.100) 6/164 NT NA noncoding (54/84 nt) REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 2146683 NA (NA)noncoding (84/84 nt) REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 151 total aligned reads displayed.

GGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTCCAGCGCTCGGCATAACGGCGG  >  NC_000913/2146584‑2146782
                                                                                                   |                                                                                                   
    tGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGAcc                                                                                                 >  1:1310458/1‑100 (MQ=255)
     gCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCa                                                                                                <  2:3380974/100‑1 (MQ=255)
       ttCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAAc                                                                                              <  1:775447/100‑1 (MQ=255)
       ttCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAAc                                                                                              <  1:771456/100‑1 (MQ=255)
       ttCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAAc                                                                                              >  1:1778026/1‑100 (MQ=255)
           ccATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTCCAAATCGCTCATTCCCCAGGCCTGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCa                                                                                          >  1:2206383/1‑100 (MQ=255)
           ccATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCa                                                                                          >  1:1965925/1‑100 (MQ=255)
            cATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCAt                                                                                         >  1:1241674/1‑100 (MQ=255)
             aTCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATg                                                                                        >  1:2987284/1‑100 (MQ=255)
               cGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCt                                                                                      >  2:795140/1‑100 (MQ=255)
                  cTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCg                                                                                   <  2:2034010/100‑1 (MQ=255)
                   tGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGt                                                                                  >  1:535897/1‑100 (MQ=255)
                    gATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTc                                                                                 <  2:3570480/100‑1 (MQ=255)
                        cGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGt                                                                             <  2:2427514/100‑1 (MQ=255)
                            gCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGcc                                                                         >  2:3131412/1‑100 (MQ=255)
                             cTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCa                                                                        >  2:3313959/1‑100 (MQ=255)
                              tAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCCTCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAg                                                                       <  2:2606282/100‑1 (MQ=255)
                              tAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTGTGGTTGCCAg                                                                       <  1:878711/100‑1 (MQ=255)
                               aaCGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGc                                                                      <  1:202826/100‑1 (MQ=255)
                               aaCGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGc                                                                      >  2:3063523/1‑100 (MQ=255)
                                aCGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGcc                                                                     <  1:1166886/100‑1 (MQ=255)
                                aCGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGcc                                                                     >  2:742983/1‑100 (MQ=255)
                                   cgTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTc                                                                  <  2:792791/100‑1 (MQ=255)
                                     tCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCg                                                                <  1:1095223/100‑1 (MQ=255)
                                       ttATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGta                                                              >  1:1766094/1‑100 (MQ=255)
                                        tATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGtat                                                             >  1:1391762/1‑100 (MQ=255)
                                          tCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATAc                                                           <  2:3337294/100‑1 (MQ=255)
                                           cATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATAcc                                                          <  2:3110678/100‑1 (MQ=255)
                                            aTGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCa                                                         <  2:1141512/100‑1 (MQ=255)
                                            aTGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCa                                                         >  2:1056295/1‑100 (MQ=255)
                                             tGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAg                                                        >  2:1197833/1‑100 (MQ=255)
                                              gCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGa                                                       >  2:1092567/1‑100 (MQ=255)
                                               ccTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGat                                                      <  2:1800841/100‑1 (MQ=255)
                                                cTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGata                                                     >  2:3617848/1‑100 (MQ=255)
                                                   cAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGc                                                  >  2:1213226/1‑100 (MQ=255)
                                                    aaaTCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCa                                                 <  2:3023099/100‑1 (MQ=255)
                                                    aaaTCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCa                                                 <  2:1778035/100‑1 (MQ=255)
                                                     aaTCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCaa                                                >  1:1480220/1‑100 (MQ=255)
                                                     aaTCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCaa                                                >  2:256589/1‑100 (MQ=255)
                                                     aaTCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGACGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCa                                                 >  1:2106893/1‑99 (MQ=255)
                                                      aTCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGCCCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAAc                                               >  2:3143202/1‑100 (MQ=255)
                                                      aTCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAAc                                               >  1:1838475/1‑100 (MQ=255)
                                                         gCTCATTCCCCAGGCTGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAgc                                            >  1:3489443/1‑100 (MQ=255)
                                                          cTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAgcg                                           <  2:1766102/100‑1 (MQ=255)
                                                          cTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAgcg                                           <  1:2413279/100‑1 (MQ=255)
                                                          cTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAgcg                                           <  2:1051836/100‑1 (MQ=255)
                                                            cATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAgcgag                                         >  1:1051830/1‑98 (MQ=255)
                                                            cATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCa                                         >  1:3663879/1‑100 (MQ=255)
                                                            cATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCa                                         >  2:3463304/1‑100 (MQ=255)
                                                             aTTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCAt                                        <  2:2091179/100‑1 (MQ=255)
                                                             aTTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCAt                                        <  2:3206792/100‑1 (MQ=255)
                                                              ttCCCCAGGCCGGATAAGGCGCTCGCACCGAATCCGGCGACCAACGTCATGCTTCGTATGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGAGCATa                                       >  1:1425645/1‑100 (MQ=255)
                                                                ccccAGGCCGGTTACGGCGCTCCCATCGCATCAGGCGACCAACGTCAGGCTTCGTCTGGTCGCCAGCCTTCCGTACACCGGTACTGCAACAGCACCTaa                                      >  1:527705/1‑99 (MQ=255)
                                                                ccccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAg                                     >  2:3028455/1‑100 (MQ=255)
                                                                 cccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGa                                    >  1:937761/1‑100 (MQ=255)
                                                                  ccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGaa                                   <  1:1724904/100‑1 (MQ=255)
                                                                   cAGGCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagcac                                  <  1:2524768‑M2/100‑68 (MQ=255)
                                                                    aGGCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagcacg                                 <  2:1297306‑M2/100‑69 (MQ=255)
                                                                    aGGCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagcacg                                 <  2:2918750‑M2/100‑69 (MQ=255)
                                                                    aGGCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcattagcgtcgcatcaggcgatggggaagcacg                                 <  1:2491405‑M2/100‑69 (MQ=255)
                                                                    aGGCCGGATAAGGCGCTCGCACCGCATCCGGCatggggaatgagcgagttgtaggcatgataagacgcgttagcggcgcatcaggcgatggggaagcaag                                 <  1:3177395‑M2/100‑69 (MQ=255)
                                                                    aGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACg                                 <  2:3436317/100‑1 (MQ=255)
                                                                     ggCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagcacgc                                <  2:2576240‑M2/100‑70 (MQ=255)
                                                                     ggCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagcacgc                                <  1:2852338‑M2/100‑70 (MQ=255)
                                                                      gCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGcc                               >  2:1448673/1‑100 (MQ=255)
                                                                        cGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAg                             <  2:45936/100‑1 (MQ=255)
                                                                        cGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAg                             >  2:2526563/1‑100 (MQ=255)
                                                                            tAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCt                         <  1:608661/100‑1 (MQ=255)
                                                                            tAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCt                         >  2:2755814/1‑100 (MQ=255)
                                                                              aGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTc                       >  1:2359841/1‑100 (MQ=255)
                                                                               ggCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTcc                      >  1:2381430/1‑100 (MQ=255)
                                                                               ggCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTcc                      <  1:2399034/100‑1 (MQ=255)
                                                                               ggCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTcc                      >  2:1780162/1‑100 (MQ=255)
                                                                               ggCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTcc                      >  1:259186/1‑100 (MQ=255)
                                                                                gcgcTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTCCa                     <  2:2036126/100‑1 (MQ=255)
                                                                                 cgcTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagcacccctcagttaatcg                    >  2:2491419‑M2/1‑19 (MQ=255)
                                                                                 cgcTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTCCAg                    <  2:2520493/100‑1 (MQ=255)
                                                                                 cgcTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTCCAg                    >  2:3281450/1‑100 (MQ=255)
                                                                                  gcTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTCCAgc                   <  1:1009529/100‑1 (MQ=255)
                                                                                   cTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACGGCGCATAAGAACGCCAGGGCTTCCAgcg                  <  1:799834/100‑1 (MQ=255)
                                                                                     cGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTCCAgcgc                 >  1:2043904/1‑99 (MQ=255)
                                                                                     cGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTCCAGCGCt                >  2:1244387/1‑100 (MQ=255)
                                                                                      gCACCGCATCCCGAGACCAACGTCATGATTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGGACGCCAGGGCTTCCa                     >  1:973877/1‑94 (MQ=255)
                                                                                         ccGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTCCAGCGCTCGGc            <  2:3398486/100‑1 (MQ=255)
                                                                                         ccGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTCCAGCGCTCGGc            >  2:1130873/1‑100 (MQ=255)
                                                                                         ccGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTCCAGCGCTCGGc            >  2:927278/1‑100 (MQ=255)
                                                                                           gCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTCCAGCGCTCGGCAt          >  1:674948/1‑100 (MQ=255)
                                                                                           gCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTCCAGCGCTCGGCAt          <  2:2835851/100‑1 (MQ=255)
                                                                                           gCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTCCAGCGCTCGGCAt          <  1:318840/100‑1 (MQ=255)
                                                                                           gCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTCCAGCGCTCGGCAt          <  1:90310/100‑1 (MQ=255)
                                                                                               ccGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagcacgcctcagttaatcgcgaaataactacta      <  1:2327958‑M2/100‑96 (MQ=255)
                                                                                               ccGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagcacgcctcagttaatcgcgaaataactacta      >  2:1650405‑M2/1‑5 (MQ=255)
                                                                                                cGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagcacgcctcagttaatcgcgaaataactactat     >  1:1701138‑M2/1‑4 (MQ=255)
                                                                                                cGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagcacgcctcagttaatcgcgaaataactac        >  1:3435812‑M2/1‑4 (MQ=255)
                                                                                                 ggCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagcacgcctcagttaatcgcgaaataactactatt    <  1:1521412‑M2/100‑98 (MQ=255)
                                                                                                 ggCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagcacgcctcagttaatcgcgaaataactactatt    <  2:831848‑M2/100‑98 (MQ=255)
                                                                                                 ggCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagcacgcctcagttaatcgcgaaataactactatt    <  2:2085479‑M2/100‑98 (MQ=255)
                                                                                                 ggCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTCCAGCGCTCGGCATAAcggc    >  2:449585/1‑100 (MQ=255)
                                                                                                  gCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagcacgcctcagttaatcgcgaaataactactattc   <  1:901225‑M2/100‑99 (MQ=255)
                                                                                                   cGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTCCAGCGCTCGGCATAAcggcgg  <  1:506931/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGCCAGGGCTTCCAGCGCTCGGCATAACGGCGG  >  NC_000913/2146584‑2146782

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.