BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2794135	NA (NA)	4 (0.030)	4/168	NT	NA	noncoding (108/136 nt)	REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences
*	?	NC_000913	= 2794163	NA (NA)	4 (0.030)	4/168	NT	NA	noncoding (136/136 nt)	REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 177 total aligned reads displayed.

GGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGCAAT  >  NC_000913/2794065‑2794262

ggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGC                                                                                                     >  1:2571193‑M2/1‑99 (MQ=255)

    ccAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTCTGTTCGCCGGGTAAGGCGGAGCCGCTCTCCGGAaaaa                                                                                                 >  1:3541789/1‑99 (MQ=255)

     cAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAg                                                                                               >  1:2657626/1‑100 (MQ=255)

      aGGTCGGATAACGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGa                                                                                              >  1:1933241/1‑100 (MQ=255)

       ngTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGaa                                                                                             >  2:2390717/2‑100 (MQ=255)

       ggTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGaa                                                                                             <  2:976245/100‑1 (MQ=255)

       ggTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAACCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGaa                                                                                             >  1:1606817/1‑100 (MQ=255)

         tCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATc                                                                                           <  2:694806/100‑1 (MQ=255)

          cGGATAAGGCGTTTGCGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGACCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAg                                                                                               <  1:276626/95‑1 (MQ=255)

          cGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCa                                                                                          <  2:1899893/100‑1 (MQ=255)

          cGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCa                                                                                          >  2:1443469/1‑100 (MQ=255)

           ggATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCaa                                                                                         >  2:2069974/1‑100 (MQ=255)

            gATAAGGCGTTTACGCCGCATGCGACAAGCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAAt                                                                                        <  1:837719/100‑1 (MQ=255)

            gATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAAt                                                                                        <  2:101652/100‑1 (MQ=255)

             aTAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATa                                                                                       >  2:1075085/1‑100 (MQ=255)

                aGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACa                                                                                    >  2:2295115/1‑100 (MQ=255)

                aGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACa                                                                                    >  1:1502386/1‑100 (MQ=255)

                    gTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATta                                                                                >  2:1667101/1‑100 (MQ=255)

                      ttACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATtata                                                                              <  1:929474/100‑1 (MQ=255)

                      ttACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTGGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATtata                                                                              <  1:3499266/100‑1 (MQ=255)

                       tACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAc                                                                             >  1:105688/1‑100 (MQ=255)

                       tACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAc                                                                             >  1:2712467/1‑100 (MQ=255)

                         cgccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgc                                                                           >  1:377312/1‑100 (MQ=255)

                         cgccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgc                                                                           >  2:2543085/1‑100 (MQ=255)

                         cgccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTATCCGGCAAACAGAATCAATAACAATTATAcgc                                                                           >  1:2536411/1‑100 (MQ=255)

                          gccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgcg                                                                          <  2:1319982/100‑1 (MQ=255)

                          gccgcATCCGACAATATGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgcg                                                                          <  1:1765033/100‑1 (MQ=255)

                           ccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGt                                                                         >  1:1031396/1‑100 (MQ=255)

                            cgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTg                                                                        >  2:3270862/1‑100 (MQ=255)

                            cgcATCCGACAAGCTGTACGTGAACAGGAAGAAATCTAAGTTGGCCGGGTAAGGCGGAGCCGCGCTCCGGCAAAAAGAATCAATAACAATTATACGCGTg                                                                        <  1:2008098/100‑1 (MQ=255)

                              cATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAc                                                                      <  1:1482538/100‑1 (MQ=255)

                                tCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAccc                                                                    >  2:1205901/1‑100 (MQ=255)

                                 ccGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCg                                                                   >  2:2481918/1‑100 (MQ=255)

                                     cAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGgcgc                                                               >  2:2995160/1‑100 (MQ=255)

                                       aTCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCgg                                                             <  1:1421033/100‑1 (MQ=255)

                                        tCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATGAATAACAATTATACGCGTGACCCGGCGCggg                                                            >  1:632672/1‑100 (MQ=255)

                                        tCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCggn                                                            <  1:2390704/100‑2 (MQ=255)

                                        tCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCggg                                                            <  2:2594421/100‑1 (MQ=255)

                                        tCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCggg                                                            >  2:3382470/1‑100 (MQ=255)

                                        tCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCggg                                                            <  2:3561768/100‑1 (MQ=255)

                                         cTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGa                                                           <  1:1131297/100‑1 (MQ=255)

                                          tGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGaa                                                          <  1:1764435/100‑1 (MQ=255)

                                          tGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGaa                                                          <  1:3121112/100‑1 (MQ=255)

                                           gTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGaaa                                                         >  2:1611596/1‑100 (MQ=255)

                                            tACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAAt                                                        <  1:1865482/100‑1 (MQ=255)

                                            tACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAAt                                                        <  2:1121043/100‑1 (MQ=255)

                                            tACGTGAACAGGAAGAAATCTATGTTGGCCGGGGAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAAt                                                        <  1:1498398/100‑1 (MQ=255)

                                             aCGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATg                                                       >  2:2137289/1‑100 (MQ=255)

                                              cGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGt                                                      >  2:1842863/1‑100 (MQ=255)

                                                 gAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgg                                                   <  1:753509/100‑1 (MQ=255)

                                                 gAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCg                                                    >  1:481221/1‑99 (MQ=255)

                                                  aaCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCggg                                                  <  1:2301715/100‑1 (MQ=255)

                                                  aaCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCggg                                                  <  1:276291/100‑1 (MQ=255)

                                                   aCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgggg                                                 >  2:1978606/1‑100 (MQ=255)

                                                    cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgc                                                <  2:2742397/100‑1 (MQ=255)

                                                     aGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCaaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgcc                                               >  2:863891‑M2/1‑46 (MQ=255)

                                                      ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                                              >  2:2351257/1‑100 (MQ=255)

                                                        aagaaATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCGATAACCATTATCCGAGTGCCCCGGCGCGGGAACTATCGGGgcg                                               >  1:567095/1‑97 (MQ=255)

                                                          gaaATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCtctc                                          <  1:3569232/100‑1 (MQ=255)

                                                            aaTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTccc                                        <  1:2148250/100‑1 (MQ=255)

                                                             aTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCa                                       <  1:1312379/100‑1 (MQ=255)

                                                                tATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacct                                    <  1:1280550‑M2/100‑66 (MQ=255)

                                                                tATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAGCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGt                                    <  1:2974699/100‑1 (MQ=255)

                                                                 aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTg                                   <  2:1300782/100‑1 (MQ=255)

                                                                   gTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGac                                 <  1:212547/100‑1 (MQ=255)

                                                                   gTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGac                                 >  1:1885523/1‑100 (MQ=255)

                                                                     tGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacac                               >  1:905680/1‑100 (MQ=255)

                                                                       gCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacacac                             >  2:1131415/1‑100 (MQ=255)

                                                                        ccGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACt                            >  2:366283/1‑100 (MQ=255)

                                                                        ccGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACt                            >  2:152610/1‑100 (MQ=255)

                                                                         cGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACtt                           >  2:2887016/1‑100 (MQ=255)

                                                                           ggTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTc                         >  2:453538/1‑100 (MQ=255)

                                                                           ggTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTc                         >  2:2612104/1‑100 (MQ=255)

                                                                           ggTAAGGCGGAGCCGCTCTCAGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTc                         <  2:77332/100‑1 (MQ=255)

                                                                            gTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCg                        <  1:2075544/100‑1 (MQ=255)

                                                                            gTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCg                        <  1:932190/100‑1 (MQ=255)

                                                                             tAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCga                       <  1:1533124/100‑1 (MQ=255)

                                                                              aaGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCgag                      >  1:327816/1‑100 (MQ=255)

                                                                                ggCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGagag                    <  1:348878/100‑1 (MQ=255)

                                                                                ggCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGagag                    >  1:673502/1‑100 (MQ=255)

                                                                                ggCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGagag                    >  2:509597/1‑100 (MQ=255)

                                                                                 gCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCgag                      <  1:3451517/97‑1 (MQ=255)

                                                                                 gCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAgg                   <  1:3496247/100‑1 (MQ=255)

                                                                                   ggAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGAt                 >  1:937659/1‑100 (MQ=255)

                                                                                    gAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGAtt                >  2:3317824/1‑100 (MQ=255)

                                                                                      gCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCa              >  2:3543035/1‑100 (MQ=255)

                                                                                      gCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCa              <  1:3676448/100‑1 (MQ=255)

                                                                                        cGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAgg            >  2:1485293/1‑100 (MQ=255)

                                                                                         gCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGa           >  2:424845/1‑100 (MQ=255)

                                                                                            ctcCGGCcaacatatagggcttcctgttcacgtacagattgtcggatgctgcttaaacgccttatccgacctggatccccgtaggccggacaagacgcgc        >  1:2587246‑M2/1‑7 (MQ=255)

                                                                                             tcCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATggg       >  2:1987500/1‑100 (MQ=255)

                                                                                              ccGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtaggccggacaagacgcgcag      >  2:3176285‑M2/1‑5 (MQ=255)

                                                                                              ccGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATggg       <  1:3212750/99‑1 (MQ=255)

                                                                                               cGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtaggccggacaagacgcgcagc     <  1:2917599‑M2/100‑97 (MQ=255)

                                                                                               cGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGc     <  1:1131409/100‑1 (MQ=255)

                                                                                                ggCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGCa    <  2:2549574/100‑1 (MQ=255)

                                                                                                ggCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGCa    >  1:1952643/1‑100 (MQ=255)

                                                                                                 gCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGCaa   >  2:279702/1‑100 (MQ=255)

                                                                                                 gCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGCaa   <  2:2268470/100‑1 (MQ=255)

                                                                                                 gCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGCaa   <  1:1695937/100‑1 (MQ=255)

GGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGCAAT  >  NC_000913/2794065‑2794262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.