New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3087911NA (NA)9 (0.070) 5/170 NT NA intergenic (+51/‑373) metK/galP S‑adenosylmethionine synthetase/D‑galactose transporter
?NC_000913 = 3087934 NA (NA)noncoding (23/26 nt) REP215 (repetitive extragenic palindromic) element; contains 1 REP sequences REP215 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 210 total aligned reads displayed.

GCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACAGAC  >  NC_000913/3087836‑3088033
                                                                                                  |                                                                                                   
gcgcGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCg                                                                                                    <  2:1844376/100‑1 (MQ=255)
  gcgATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGc                                                                                                  <  1:1265218/100‑1 (MQ=255)
   cgATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCa                                                                                                 <  1:1890527/100‑1 (MQ=255)
    gATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCaa                                                                                                <  2:1976935/100‑1 (MQ=255)
       gctgcCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCaaaaa                                                                                             >  2:2690570/1‑100 (MQ=255)
        ctgcCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCaaaaaa                                                                                            >  1:3267244/1‑100 (MQ=255)
         tgcCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCaaaaaaa                                                                                           <  1:3640974/100‑1 (MQ=255)
         tgcCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCaaaaaaa                                                                                           >  2:1468774/1‑100 (MQ=255)
          gcCGGTCTGGAGTAATCTTTCTTCACCTGCGTTCAGAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCGTCCGGCagaaaaa                                                                                           >  1:3349699/1‑99 (MQ=255)
          gcCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCAACAaaaaaaaaaac                                                                                          >  1:1673821‑M2/1‑89 (MQ=255)
             ggTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAAccgc                                                                                       >  2:698552/1‑100 (MQ=255)
             ggTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCAaaaaaaaaaaccgc                                                                                       >  1:3001518‑M2/1‑86 (MQ=255)
              gTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAAccgcc                                                                                      >  2:1949621/1‑100 (MQ=255)
                cTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAAccgcccg                                                                                    >  2:3376714/1‑100 (MQ=255)
                cTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAAccgcccg                                                                                    <  2:2130063/100‑1 (MQ=255)
                  gAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCATGCCGCATCCGGCAAAAAAACCGCCCGca                                                                                  >  2:1423323/1‑100 (MQ=255)
                  gAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGca                                                                                  >  1:2130299/1‑100 (MQ=255)
                  gAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGca                                                                                  >  1:3576919/1‑100 (MQ=255)
                  gAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGca                                                                                  >  2:16146/1‑100 (MQ=255)
                   aaGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGcac                                                                                 <  1:3065015/100‑1 (MQ=255)
                    aGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGcaca                                                                                >  2:3560493/1‑100 (MQ=255)
                    aGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGcaca                                                                                >  2:737225/1‑100 (MQ=255)
                     gTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACaa                                                                               >  2:2912573/1‑100 (MQ=255)
                        aTCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATaa                                                                            >  1:2056914/1‑100 (MQ=255)
                         tctttcttCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAAc                                                                           >  2:304886/1‑100 (MQ=255)
                          ctttcttCACCTGCGTTCAAAGGCCAGCCTCGCGCTGTCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAAca                                                                          >  1:3137517/1‑100 (MQ=255)
                          ctttcttCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAAca                                                                          >  2:2294120/1‑100 (MQ=255)
                           tttcttCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAAcat                                                                         <  2:1527183/100‑1 (MQ=255)
                           tttcttCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAAcat                                                                         >  2:3411367/1‑100 (MQ=255)
                            ttcttcACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAAcatc                                                                        <  2:1267757/100‑1 (MQ=255)
                             tcttcACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAAcatca                                                                       >  1:2467653/1‑100 (MQ=255)
                              cttcACCTGCGTTCAAAGGCCAGCCGCGCGCTGGCCTCTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAAcatcat                                                                      <  1:1486725/100‑1 (MQ=255)
                                tcACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCAttc                                                                    <  2:2029023/100‑1 (MQ=255)
                                 cACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCAttct                                                                   <  1:443331/100‑1 (MQ=255)
                                  aCCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCAttctt                                                                  <  2:1484039/100‑1 (MQ=255)
                                   ccTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCAttcttc                                                                 >  2:1871181/1‑100 (MQ=255)
                                      gCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTg                                                              <  1:2857267/100‑1 (MQ=255)
                                       cGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGa                                                             >  2:3533839/1‑100 (MQ=255)
                                       cGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGa                                                             >  2:2752557/1‑100 (MQ=255)
                                       cGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACACCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGa                                                             >  1:627951/1‑100 (MQ=255)
                                         ttCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATc                                                           <  2:3154263/100‑1 (MQ=255)
                                          tCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCa                                                          <  1:1437206/100‑1 (MQ=255)
                                             aaGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGt                                                       >  2:2570150/1‑100 (MQ=255)
                                             aaGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGt                                                       <  1:1190689/100‑1 (MQ=255)
                                             aaGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACCCCGCATCCGGCAAAAACACCGCCCGCACCATAACACCATTCTTCCTGCTCAc                                                         >  1:2124106/1‑98 (MQ=38)
                                               ggCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACg                                                        >  1:3103625/1‑97 (MQ=255)
                                                  cAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCa                                                   <  1:405318/99‑1 (MQ=255)
                                                  cAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCAc                                                  <  2:3622475/100‑1 (MQ=255)
                                                   aGCCTCGCGCTGGCCTTTTTCTTGTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCAcc                                                 <  1:282962/100‑1 (MQ=255)
                                                    gCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCg                                                >  2:1589400/1‑100 (MQ=255)
                                                    gCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCg                                                <  2:2842988/100‑1 (MQ=255)
                                                     ccTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGc                                               >  2:534198/1‑100 (MQ=255)
                                                      cTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCa                                              >  2:2805979/1‑100 (MQ=255)
                                                          cgcTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACCATACCATCATTCTTCCTGATCACGTTTCAcccc                                               >  1:1913911/1‑93 (MQ=255)
                                                          cgcTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGAtt                                          >  2:1260153/1‑100 (MQ=255)
                                                             tGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTatc                                       <  1:1296838/100‑1 (MQ=255)
                                                              ggCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTatca                                      <  2:607221/100‑1 (MQ=255)
                                                               gCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTatcat                                     >  2:1388078/1‑100 (MQ=255)
                                                                ccTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCaaaagaaaaaggccagcgcgaggctggcctttgaacgcaggtgaagaaagattacttcagaccgg                                    <  1:1212723‑M2/100‑66 (MQ=255)
                                                                ccTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTatcatc                                    >  1:1014074/1‑100 (MQ=255)
                                                                   ttttCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATcaca                                 >  2:2092581/1‑100 (MQ=255)
                                                                   ttttCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATcac                                  <  1:1625285/99‑1 (MQ=255)
                                                                    tttCTTTTGGATAGGCGTTCACGCCGCATCCaaaagaaaaaggccagcgcgaggctggcctttgaacgcaggtgaagaaagattacttcagaccggcagc                                <  2:3224710‑M2/100‑70 (MQ=255)
                                                                    tttCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACaa                                <  2:2733297/100‑1 (MQ=255)
                                                                      tCTTTTGGATAGGCGTTCACGCCGCATCCaaaagaacaaggccagcgagaggctggcctttgaacgcaggtgaagaaagattacttcagaccggcagcat                              <  1:2940503‑M2/100‑72 (MQ=255)
                                                                       cTTTTGGATAGGCGTTCACGCCGCATCCaaaagaaaaaggccagcgcgaggctggcctttgaacgcaggtgaagaaagattacttcagaccggcagcatc                             <  2:1938914‑M2/100‑73 (MQ=255)
                                                                       cTTTTGGATAGGCGTTCACGCCGCATCCaaaagaaaaaggccagcgcgaggctggcctttgaacgcaggtgaagaaagattacttcagaccggcagcatc                             <  1:1767700‑M2/100‑73 (MQ=255)
                                                                       cTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTg                             >  1:980010/1‑100 (MQ=255)
                                                                       cTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTg                             >  1:2847265/1‑100 (MQ=255)
                                                                       cTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTg                             >  1:2786848/1‑100 (MQ=255)
                                                                       cTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTg                             >  2:430120/1‑100 (MQ=255)
                                                                        ttttGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGa                            >  2:2932856/1‑100 (MQ=255)
                                                                         tttGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGaa                           <  1:1018777/100‑1 (MQ=255)
                                                                          ttGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGaaa                          >  2:907651/1‑100 (MQ=255)
                                                                            ggATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAAcc                        >  2:1153191/1‑100 (MQ=255)
                                                                             gATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCg                       <  2:1114376/100‑1 (MQ=255)
                                                                               tAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGAt                     >  2:3505364/1‑100 (MQ=255)
                                                                                aGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGAtt                    <  1:1476439/100‑1 (MQ=255)
                                                                                   cGTTCACGCCGCATCCGGCAGAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGCAACCGATTaca                 >  1:2259099/1‑100 (MQ=255)
                                                                                   cGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCCCAGATTATCATCACAACTGAAACCGATTaca                 <  2:2490467/100‑1 (MQ=255)
                                                                                    gTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGAtagatc                >  1:700221/1‑95 (MQ=255)
                                                                                    gTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTacac                <  2:1757093/100‑1 (MQ=255)
                                                                                     ttCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACacc               <  2:2837934/100‑1 (MQ=255)
                                                                                      tCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACacca              >  2:2956340/1‑100 (MQ=255)
                                                                                         cgccgcATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACaccaacc           <  2:2554554/100‑1 (MQ=255)
                                                                                         cgccgcATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACaccaacc           >  1:1829082/1‑100 (MQ=255)
                                                                                         cgccgcATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACaccaacc           <  1:3192282/100‑1 (MQ=255)
                                                                                             gcATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACcaca        <  1:1447200/99‑1 (MQ=255)
                                                                                             gcATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCacaa       <  2:833430/100‑1 (MQ=255)
                                                                                               aTCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCacaaca     <  1:3173417/100‑1 (MQ=255)
                                                                                                tCCGGCAAAAAAACCGCTCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACAg    <  1:2601574/100‑1 (MQ=255)
                                                                                                 ccaaaagaaaaaggccagcgcgaggctggcctttgaacgcaggtgaagaaagattacttcagaccggcagcatcgcgcagcagctgcgctttgtcggttt   <  2:3295089‑M2/100‑99 (MQ=255)
                                                                                                 ccaaaagaaaaaggccagcgcgaggctggcctttgaacgcaggtgaagaaagattacttcagaccggcagcatcgcgcagcagctgcgctttgtcggt     <  1:2560313‑M2/98‑97 (MQ=255)
                                                                                                 ccGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACAGa   >  1:602837/1‑100 (MQ=255)
                                                                                                  caaaagaaaaaggccagcgcgaggctggcctttgaacgcaggtgaagaaagattacttcagaccggcagcatcgcgcagcagctgcgctttgtcggtttt  <  1:3181829‑M2/100‑100 (MQ=255)
                                                                                                  caaaagaaaaaggccagcgcgaggctggcctttgaacgcaggtgaagaaagattacttcagaccggcagcatcgcgcagcagctgcgctttgtcggtttt  <  1:1422356‑M2/100‑100 (MQ=255)
                                                                                                  caaaagaaaaaggccagcgcgaggctggcctttgaacgcaggtgaagaaagattacttcagaccggcagcatcgcgcagcagctgcgctttgtcggtttt  <  2:2873909‑M2/100‑100 (MQ=255)
                                                                                                  cGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACAGAc  <  2:1677693/100‑1 (MQ=255)
                                                                                                  cGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACAGAc  >  1:1677686/1‑100 (MQ=255)
                                                                                                  cGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACAGAc  >  1:1394606/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
GCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACAGAC  >  NC_000913/3087836‑3088033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.