Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,781,140	0	A	G	21.6%	186.4 / 11.0	89	intergenic (+123/‑75)	lldD/trmL	L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent
Reads supporting (aligned to +/- strand):  ref base A (49/20);  new base G (0/19);  total (49/40)
Fisher's exact test for biased strand distribution p-value = 7.74e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAC  >  NC_000913/3781042‑3781239                                                                                                   |                                                                                                      ccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGagag                                                                                                      <  1:539326/100‑1 (MQ=255) ccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGagag                                                                                                      <  1:1325857/100‑1 (MQ=255) ccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGagag                                                                                                      >  1:1380303/1‑100 (MQ=255) ccTCGCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGagag                                                                                                      <  2:1003784/100‑1 (MQ=255)  ctctCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGagag                                                                                                      <  2:1696428/99‑1 (MQ=255)     tcCCTCAGCTAGAGGGTCCCCTTCGGCCGATTATTTCCTCCCTCGCCCCGAAACGCCACCGCACTCCTCTTCTCTCCCTCGCCCCTCCGGGGAGAGGGcc                                                                                                  <  2:2544205/100‑1 (MQ=255)      cccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTGCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCg                                                                                                 >  2:1665816/1‑100 (MQ=255)      cccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCg                                                                                                 >  1:2252491/1‑100 (MQ=255)      cccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCg                                                                                                 <  1:1737375/100‑1 (MQ=255)       ccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgg                                                                                                >  1:1385676/1‑100 (MQ=255)        cTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggg                                                                                               >  1:295987/1‑100 (MQ=255)        cTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggg                                                                                               <  1:1131285/100‑1 (MQ=255)        cTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggg                                                                                               >  2:2086946/1‑100 (MQ=255)        cTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggg                                                                                               >  2:1951945/1‑100 (MQ=255)         tCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgggg                                                                                              <  1:610957/100‑1 (MQ=255)          cAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGt                                                                                             >  1:2523194/1‑100 (MQ=255)            gggAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCAGGGGAGAGGGCCggg                                                                                               >  2:2155768/1‑96 (MQ=255)            gggAGAGGAGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑Ga                                                                                          >  2:238409/1‑100 (MQ=255)              gagaGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAgg                                                                                        >  1:81515/1‑100 (MQ=255)                gagGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAgggg                                                                                      <  1:1138662/100‑1 (MQ=255)                gagGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAgggg                                                                                      <  1:2482769/100‑1 (MQ=255)                gagGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAgggg                                                                                      <  2:2673560/100‑1 (MQ=255)                  ggggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑aa                                                                                   >  1:200350/1‑100 (MQ=255)                  ggggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑aa                                                                                   <  2:2045527/100‑1 (MQ=255)                  ggggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑aa                                                                                   >  1:257849/1‑100 (MQ=255)                   gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑aaa                                                                                  <  1:2088184/100‑1 (MQ=255)                    ggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑aaaa                                                                                 >  1:2133575/1‑100 (MQ=255)                     gACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAg                                                                                <  1:1741938/100‑1 (MQ=255)                     gACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAg                                                                                <  1:1741815/100‑1 (MQ=255)                       ccGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGc                                                                              <  1:192232/100‑1 (MQ=255)                        cGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAg                                                                                <  1:2198222/97‑1 (MQ=255)                        cGTTCGGCCCTGTATGTACTCCCTCGCTCTGAAACGACACCGCACGCTTTTTTTCTCCCGCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGcc                                                                             <  2:607765/100‑1 (MQ=38)                          ttCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGc                                                                           >  2:423217/1‑100 (MQ=255)                            ccgcgcTGTATGTACTCCCTCACTCTGAAACCACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCAc                                                                         >  1:1813878/3‑100 (MQ=255)                             ggCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACt                                                                        >  2:777541/1‑100 (MQ=255)                             ggCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACt                                                                        >  1:306824/1‑100 (MQ=255)                               cgcTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGc                                                                      >  2:87275/1‑100 (MQ=255)                                ncTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCTCTCTTCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCt                                                                     >  2:1973384/2‑100 (MQ=255)                                   gtatgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTTTTTTTCTCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCAc                                                                  >  2:1875493/1‑100 (MQ=255)                                       gtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAAt                                                              >  2:931777/1‑100 (MQ=255)                                       gtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAAt                                                              >  2:2687268/1‑100 (MQ=255)                                         ccgcccTCACTCGAAAACAACCCCCCTCTTTTTTTTTCCCCCCCCCCCGGGGGGGGGGGGGGCGGGGGT‑GGGGGA‑AAAAGGCCGCACTGCTCAcc                                                                 <  1:1768350/92‑1 (MQ=255)                                         aCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAAttt                                                            >  2:1592138/1‑100 (MQ=255)                                         aCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAAttt                                                            >  1:289573/1‑100 (MQ=255)                                            ccctccctCGAAAGCGACCCCTCTCTTTTTTTTTCCCCCGCGCCCCTGCGGGGGGGGGCCCGGGGT‑GGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTc                                                          <  1:669988/99‑1 (MQ=255)                                            ccccccccctGAAGCGACCCCGCCTTTTTTTTTTCCCCCCCGCCCC‑CCGGGGGGGGGGGCGGGGTGGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCt                                                         <  1:1114753/92‑1 (MQ=255)                                            cccTCCCCCTGAAACGACACCGCTCTTTTTTTTTCCCCCTCGCCCCCCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAAttt                                                            <  2:1554204/97‑1 (MQ=37)                                            cccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCt                                                         >  1:853067/1‑100 (MQ=255)                                             cccccctctGAACCGCCCCGGCCCTCTTTTTTTCCCCCTCCCCCCTCCGGGGAGGGGGCGGGGGT‑GGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTg                                                        <  2:1016746/95‑1 (MQ=255)                                             ccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTg                                                        >  1:2104139/1‑100 (MQ=255)                                             ccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTg                                                        >  2:337479/1‑100 (MQ=255)                                             ccTCACTCTGAAACGACACCACACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGACCGGGGT‑GAGGAT‑AAAAGGCCGCACTGCTCACCAATTTTc                                                          >  2:1194264/1‑98 (MQ=255)                                             ccTCACTCGAAAACGACCCCGCCCTTTTTTTTTCCCCCCCCCCCCCCGGGGGAGGGGGCGGGGGG‑GGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTg                                                        <  1:1932069/100‑1 (MQ=255)                                               tCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCt                                                      >  2:1711085/1‑100 (MQ=255)                                                 cctcgGAACCGACCCCGCCCTTTTTTTTTCCCCCCCCCCCCCCGGGGGGGGGGGCGGGGGG‑GGGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGc                                                       <  2:2018216/96‑1 (MQ=255)                                                   tctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATcc                                                  >  1:518909/1‑100 (MQ=255)                                                   tataaaaCTACCCCGCCCTTTTTTTTTCCCCCCCCCCCCCCGGGGGAGGGGGCCGGGGG‑GAGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATcc                                                  <  1:1105424/96‑1 (MQ=255)                                                    ctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt                                                 >  2:1968622/1‑100 (MQ=255)                                                      gAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGc                                               >  2:395785/1‑100 (MQ=255)                                                       aaaCCACCCCGCACTTTTTTTTTCCCCCCCGCCCCCCCGGGGAGAGGGCCGTGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg                                                <  2:1495741/98‑1 (MQ=255)                                                            acacCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGACCGGGGT‑GAGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt                                                 >  2:1704475/1‑92 (MQ=255)                                                               ccGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACt                                      >  1:980923/1‑100 (MQ=255)                                                               ccGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACt                                      >  1:2487016/1‑100 (MQ=255)                                                               ccGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACt                                      >  1:508464/1‑100 (MQ=255)                                                                  cACTCTTTTTTCCCCCCTCGCCCCCCGGGGGGGGGGGCGGGGGT‑GGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCAc                                       <  2:1406017/96‑1 (MQ=255)                                                                    ctctTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg                                 >  1:1175043/1‑100 (MQ=255)                                                                    ctctTTTTTTCTCCCCCCCCCCCCCGGGGGGGGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgg                                  <  2:1433862/99‑1 (MQ=255)                                                                       tttttttCCCCCCCCCCCCCCCGGGGGGGGGGCGGGGGT‑GGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg                                 <  1:2157465/97‑1 (MQ=255)                                                                       tttttttCCCCCCCCCCCCCCCGGGGGGGGGCCCGGGGT‑GGGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCAc                                       <  2:2064707/91‑1 (MQ=255)                                                                       ttttttcCGCCCCCCCCCCCCCGGGGGGAGGGCGGGGGG‑GGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggggg                               <  2:1871177/99‑1 (MQ=255)                                                                        ttttttCTCCTCCGCCCCGCGGGGGGGGGGGCCGGGGT‑GGGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg                                 <  2:124733/96‑1 (MQ=255)                                                                         tttttCTCCCCCGCCCCCCCGGGGGGAGGGCCGGGGT‑GGGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAg                            <  2:1380291/100‑1 (MQ=255)                                                                           tttCCCCCCCGCCCCTCCGGGGAGGGGGCGGGGGG‑GGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAgga                          <  2:306821/100‑3 (MQ=255)                                                                           tcccccccTCCCCCCGCGGGGGAG‑GGGGCGGGGT‑GGGGGGAAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTa                          <  1:2130933/95‑1 (MQ=255)                                                                            tcccccccccccccGCCGGGGGGAGGGCCGGGGG‑GGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAt                         <  1:605424/90‑1 (MQ=255)                                                                              ctcCCTCGCCCCCCCGGGGGGAGGGCCGGGGT‑GGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGc                       <  2:2069749/100‑1 (MQ=255)                                                                               tcCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCt                      >  1:2458212/1‑100 (MQ=255)                                                                               tcCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCt                      >  1:2413242/1‑100 (MQ=255)                                                                                cccTCTCTCCTCCGGGGAGAGGGCCGGGGG‑GAGGGG‑AAAAGGCCGCACTGCTCACGAATTTTCTGCTATCCTGCCCCCGCACTAAGGTGGCAGTAttc                       >  2:2282255/1‑96 (MQ=255)                                                                                cccTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTa                     >  2:944564/1‑100 (MQ=255)                                                                                 ccTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaa                    >  1:610666/1‑100 (MQ=255)                                                                                 ccTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaaa                   >  1:934117/1‑100 (MQ=255)                                                                                    cGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACa                 >  2:1939190/1‑100 (MQ=255)                                                                                     gCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACAt                >  1:90773/1‑100 (MQ=255)                                                                                     gCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACAt                >  1:625332/1‑100 (MQ=255)                                                                                      cccgactggggAGGGGGCGGGTCG‑GAGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCt                      <  1:2583137/86‑1 (MQ=255)                                                                                      ccccggaggggCGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACCTc               >  1:1223776/8‑100 (MQ=255)                                                                                      ccccGCGGGGGGGGGGGCGGGGGG‑GGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaaa                   <  1:2445145/96‑1 (MQ=255)                                                                                       cccccgggggggggggCGGGGGG‑GAGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCg              <  1:1875515/94‑1 (MQ=255)                                                                                        ccccgcgggAGGGGGCCGGGGTCGGGGTG‑AAAAGGCCGCACTTCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCg              <  1:2078513/94‑1 (MQ=255)                                                                                        ccTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGt             >  1:402264/1‑100 (MQ=255)                                                                                         ccccGGGGAGGGTGCGGGGGG‑CGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGt             <  1:139552/97‑1 (MQ=255)                                                                                          tCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTAc           >  1:2638336/1‑100 (MQ=255)                                                                                               ggAGGGGGCGGGGGG‑GGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc      <  1:568275/100‑1 (MQ=255)                                                                                               ggAGGGGGCGGGGGG‑GGGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc      <  1:238411/100‑1 (MQ=255)                                                                                                   agGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAc  >  1:426630/1‑100 (MQ=255)                                                                                                   |                                                                                                      CCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGT‑GAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAC  >  NC_000913/3781042‑3781239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑